Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib133G0914 Durio zibethinus HOM05D007122 ORTHO05D008918 5.8e-147 524.2 270 100.0
COL.COLO4_23084 Corchorus olitorius HOM05D007122 ORTHO05D008918 1.2e-96 357.1 242 76.4
Thecc.01G329100 Theobroma cacao HOM05D007122 ORTHO05D008918 7.9e-96 354.4 244 76.6
Gorai.007G115100 Gossypium raimondii HOM05D007122 ORTHO05D008918 9.6e-94 347.4 244 73.8
Gohir.D11G107500 Gossypium hirsutum HOM05D007122 ORTHO05D008918 2.1e-93 346.3 242 73.6
Manes.01G237100 Manihot esculenta HOM05D007122 ORTHO05D008918 5.3e-76 288.5 242 63.2
CiPaw.01G090900 Carya illinoinensis HOM05D007122 ORTHO05D008918 9.1e-76 287.7 244 61.5
MD17G1162500 Malus domestica HOM05D007122 ORTHO05D008918 1.3e-74 283.9 244 60.7
CANSAT01G1971 Cannabis sativa HOM05D007122 ORTHO05D008918 2.5e-73 279.6 240 62.5
Prupe.3G022800 Prunus persica HOM05D007122 ORTHO05D008918 9.4e-73 277.7 244 59.0
QL05p084392 Quercus lobata HOM05D007122 ORTHO05D008918 6.1e-72 275.0 246 60.6
Cpa.g.sc57.60 Carica papaya HOM05D007122 ORTHO05D008918 7.9e-72 274.6 240 62.1
TWI59G0863 Tripterygium wilfordii HOM05D007122 ORTHO05D008918 4.4e-70 268.9 246 58.9
Potri.002G183700 Populus trichocarpa HOM05D007122 ORTHO05D008918 1.7e-69 266.9 243 59.7
RcHm_v2.0_Chr2g0149531 Rosa chinensis HOM05D007122 ORTHO05D008918 4.8e-69 265.4 242 57.4
FAN05G3936 Fragaria x ananassa HOM05D007122 ORTHO05D008918 8.2e-69 264.6 242 57.4
FAN14G1589 Fragaria x ananassa HOM05D007122 ORTHO05D008918 8.2e-69 264.6 242 57.4
FvH4_6g36990 Fragaria vesca HOM05D007122 ORTHO05D008918 1.4e-68 263.8 242 57.4
TAR629G1569 Trochodendron aralioides HOM05D007122 ORTHO05D008918 1.3e-66 257.3 240 57.5
Dinv25395 Davidia involucrata HOM05D007122 ORTHO05D008918 5.0e-66 255.4 215 63.3
GSVIVG01027487001 Vitis vinifera HOM05D007122 ORTHO05D008918 1.9e-65 253.4 244 56.6
Atru.chr5.816 Acer truncatum HOM05D007122 ORTHO05D008918 2.5e-65 253.1 241 58.1
ClCG07G014660 Citrullus lanatus HOM05D007122 ORTHO05D008918 8.0e-64 248.1 241 56.4
Ciclev10021604m.g Citrus clementina HOM05D007122 ORTHO05D008918 8.8e-63 244.6 246 56.9
MBI12_g33188_MAGBIO Magnolia biondii HOM05D007122 ORTHO05D008918 8.8e-63 244.6 242 57.4
VMungo0331G0463 Vigna mungo HOM05D000070 ORTHO05D003491 4.4e-62 242.3 250 55.6
A05p00930 Brassica napus HOM05D007122 ORTHO05D008918 5.7e-62 241.9 249 55.0
MELO3C026712.2 Cucumis melo HOM05D007122 ORTHO05D008918 7.4e-62 241.5 242 54.5
PSO782G5442 Papaver somniferum HOM05D007122 ORTHO05D008918 7.4e-62 241.5 231 55.4
CARHR142260 Cardamine hirsuta HOM05D007122 ORTHO05D008918 9.7e-62 241.1 244 54.5
Aa31LG1G28270 Aethionema arabicum HOM05D007122 ORTHO05D008918 1.3e-61 240.7 209 62.2
Phvul.010G164100 Phaseolus vulgaris HOM05D007122 ORTHO05D008918 1.3e-61 240.7 246 56.9
Thhalv10001577m.g Eutrema salsugineum HOM05D007122 ORTHO05D008918 1.7e-61 240.4 240 55.4
BcaC02g12634 Brassica carinata HOM05D007122 ORTHO05D008918 3.7e-61 239.2 244 54.9
Sp4g28930 Schrenkiella parvula HOM05D007122 ORTHO05D008918 3.7e-61 239.2 248 53.6
Hma1.2p1_0074F.1_g038925 Hydrangea macrophylla HOM05D007122 ORTHO05D008918 6.3e-61 238.4 248 55.2
AT2G46910 Arabidopsis thaliana HOM05D007122 ORTHO05D008918 8.2e-61 238.0 249 53.4
Carub.0004s2963 Capsella rubella HOM05D007122 ORTHO05D008918 1.1e-60 237.7 212 59.9
Nn1g00501 Nelumbo nucifera HOM05D007122 ORTHO05D008918 1.1e-60 237.7 237 56.5
CsaV3_3G030490 Cucumis sativus L. HOM05D007122 ORTHO05D008918 1.8e-60 236.9 243 53.5
BraA05t19094Z Brassica rapa HOM05D007122 ORTHO05D008918 2.4e-60 236.5 250 54.8
PGR042G2951 Punica granatum HOM05D007122 ORTHO05D008918 4.1e-60 235.7 248 52.8
Dinv32665 Davidia involucrata HOM05D007122 ORTHO05D008918 1.2e-59 234.2 196 64.3
Glyma.07G002100 Glycine max HOM05D007122 ORTHO05D008918 3.5e-59 232.6 189 67.2
Medtr4g005390 Medicago truncatula HOM05D007122 ORTHO05D008918 4.5e-59 232.3 202 61.9
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 5.9e-59 231.9 245 54.3
Lj3g0016159 Lotus japonicus HOM05D007122 ORTHO05D008918 5.9e-59 231.9 227 56.8
Cc02_g30330 Coffea canephora HOM05D007122 ORTHO05D008918 1.3e-58 230.7 229 55.5
Sopen08g022350 Solanum pennellii HOM05D007122 ORTHO05D008918 5.0e-58 228.8 212 57.5
Ca_20970_v3 Cicer arietinum L. HOM05D007122 ORTHO05D008918 1.1e-57 227.6 188 64.4
Sabra02G0131900 Salix brachista HOM05D007122 ORTHO05D008918 3.2e-57 226.1 332 44.0
Psat7g265240 Pisum sativum HOM05D007122 ORTHO05D008918 5.5e-57 225.3 198 60.1
Rhsim04G0175900 Rhododendron simsii HOM05D007122 ORTHO05D008918 5.5e-57 225.3 264 49.2
Solyc08g068590.4 Solanum lycopersicum HOM05D007122 ORTHO05D008918 5.5e-57 225.3 212 56.6
Lj9A610T61 Lonicera japonica HOM05D007122 ORTHO05D008918 7.2e-57 224.9 185 64.3
Peaxi162Scf00822g00313 Petunia axillaris HOM05D007122 ORTHO05D008918 2.1e-56 223.4 216 54.6
THA.LOC104802109 Tarenaya hassleriana HOM05D007122 ORTHO05D008918 2.7e-56 223.0 194 61.9
Actinidia33027 Actinidia chinensis HOM05D007122 ORTHO05D008918 3.6e-56 222.6 248 51.6
arahy.Tifrunner.gnm1.ann1.XK7RJX Arachis hypogaea HOM05D007122 ORTHO05D008918 3.6e-56 222.6 187 62.0
arahy.Tifrunner.gnm1.ann1.KLKB5C Arachis hypogaea HOM05D007122 ORTHO05D008918 4.7e-56 222.2 187 61.5
CAN.G21.48 Capsicum annuum HOM05D007122 ORTHO05D008918 6.1e-56 221.9 189 59.8
Lalb_Chr04g0264851 Lupinus albus HOM05D007122 ORTHO05D008918 8.0e-56 221.5 183 63.9
EL10Ac5g10570 Beta vulgaris HOM05D007122 ORTHO05D008918 1.0e-55 221.1 185 60.0
vmacro08515 Vaccinium macrocarpon HOM05D007122 ORTHO05D008918 3.0e-55 219.5 205 56.1
MSTRG.12208 Avicennia marina HOM05D007122 ORTHO05D008918 6.8e-55 218.4 188 62.8
AUR62028625 Chenopodium quinoa HOM05D007122 ORTHO05D008918 8.8e-55 218.0 181 62.4
AUR62008050 Chenopodium quinoa HOM05D007122 ORTHO05D008918 1.2e-54 217.6 192 58.3
Sc05g0001590 Simmondsia chinensis HOM05D007122 ORTHO05D008918 1.2e-54 217.6 198 57.6
TPR.G38811 Trifolium pratense HOM05D007122 ORTHO05D008918 1.2e-54 217.6 198 61.1
HPP92_007409 Vanilla planifolia HOM05D007122 ORTHO05D008918 9.8e-54 214.5 188 61.7
Eucgr.E00013 Eucalyptus grandis HOM05D007122 ORTHO05D008918 1.7e-53 213.8 188 60.6
Hund02816 Selenicereus undatus HOM05D007122 ORTHO05D008918 2.2e-53 213.4 181 60.8
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 6.3e-53 211.8 163 63.8
Oeu050289.1 Olea europaea HOM05D007122 ORTHO05D008918 6.3e-53 211.8 186 59.7
Nitab4.5_0006202g0020 Nicotiana tabacum HOM05D007122 ORTHO05D008918 4.1e-52 209.1 184 58.2
CDE02G4652 Ceratophyllum demersum HOM05D007122 ORTHO05D008918 5.4e-52 208.8 202 57.9
PGSC0003DMG400029047 Solanum tuberosum HOM05D007122 ORTHO05D008918 2.0e-51 206.8 242 48.8
Lsat_1_v5_gn_4_31280 Lactuca sativa HOM05D007122 ORTHO05D008918 2.2e-50 203.4 204 55.9
unitig_0.g1006 Utricularia gibba HOM05D007122 ORTHO05D003998 2.2e-50 203.4 191 56.0
Ah.11g050690 Amaranthus hybridus HOM05D007122 ORTHO05D008918 1.1e-49 201.1 139 72.7
ATR0579G047 Amborella trichopoda HOM05D007122 ORTHO05D008918 1.5e-49 200.7 187 56.7
ECA234G3018 Erigeron canadensis HOM05D007122 ORTHO05D008918 1.5e-49 200.7 192 56.8
HanXRQChr16g0524441 Helianthus annuus HOM05D007122 ORTHO05D008918 1.9e-49 200.3 211 53.1
SGA_v2.0_scaffold104G30244 Striga asiatica HOM05D007122 ORTHO05D008918 7.2e-49 198.4 278 45.0
Glyma.14G134000 Glycine max HOM05D007122 ORTHO05D008918 1.6e-48 197.2 142 72.5
Zm00001eb220590 Zea mays HOM05D007122 ORTHO05D008918 2.1e-48 196.8 189 56.1
Os10g0509200 Oryza sativa ssp. japonica HOM05D007122 ORTHO05D008918 3.6e-48 196.1 186 57.0
Migut.N02127 Erythranthe guttata HOM05D007122 ORTHO05D008918 4.0e-47 192.6 149 67.8
Aqoxy5G04392 Aquilegia oxysepala HOM05D007122 ORTHO05D008918 7.5e-46 188.3 187 55.1
Gohir.A11G103000 Gossypium hirsutum HOM05D007122 ORTHO05D008918 5.9e-43 178.7 143 66.4
Sed0017612 Sechium edule HOM05D007122 ORTHO05D008918 2.9e-42 176.4 152 61.2
Glyma.08G224600 Glycine max HOM05D007122 ORTHO05D008918 1.1e-41 174.5 161 60.9
Mapoly0069s0014 Marchantia polymorpha HOM05D007122 ORTHO05D008918 2.6e-38 163.3 183 49.2
Haze_16258 Corylus avellana HOM05D007122 ORTHO05D008918 2.4e-36 156.8 167 54.5
SMO232G0083 Selaginella moellendorffii HOM05D007122 ORTHO05D008918 1.0e-34 151.4 138 55.8
Pp3c11_15290 Physcomitrium patens HOM05D007122 ORTHO05D008918 3.6e-32 142.9 109 60.6
Pp3c2_10460 Physcomitrium patens HOM05D007122 ORTHO05D008918 2.0e-30 137.1 142 47.2
QL05p083819 Quercus lobata HOM05D007122 ORTHO05D008918 2.6e-30 136.7 85 78.8
Zm00001eb094490 Zea mays HOM05D007122 ORTHO05D008918 9.8e-30 134.8 90 71.1
PSO063G7482 Papaver somniferum HOM05D007122 ORTHO05D008918 8.3e-21 105.1 111 53.2
FAN02G0509 Fragaria x ananassa HOM05D007122 ORTHO05D008918 8.1e-16 88.6 161 36.6
FAN09G2218 Fragaria x ananassa HOM05D007122 ORTHO05D008918 4.9e-13 79.3 91 46.2
Cre01.g039550 Chlamydomonas reinhardtii HOM05D007122 ORTHO05D008918 4.1e-12 76.3 178 30.9
SGA_v2.0_scaffold159G37569 Striga asiatica HOM05D007122 ORTHO05D008918 5.4e-12 75.9 114 40.4
MCO07G119 Micromonas commoda HOM05D007122 ORTHO05D008918 2.1e-11 73.9 151 36.4
CBR_g49209 Chara braunii HOM05D002234 ORTHO05D002254 1.9e-09 67.4 152 36.2
CANSAT56G3028 Cannabis sativa HOM05D002234 ORTHO05D002254 2.1e-08 63.9 154 32.5
CANSAT56G3737 Cannabis sativa HOM05D002234 ORTHO05D002254 2.1e-08 63.9 154 32.5
Mapoly0070s0031 Marchantia polymorpha HOM05D002234 ORTHO05D002254 2.8e-08 63.5 142 35.2
Duzib235G1028 Durio zibethinus HOM05D002234 ORTHO05D002254 4.7e-08 62.8 153 32.0
Duzib192G0327 Durio zibethinus HOM05D002234 ORTHO05D002254 8.1e-08 62.0 153 31.4
AagrBONN_evm.TU.Sc2ySwM_369.590 Anthoceros agrestis HOM05D002234 ORTHO05D002254 2.4e-07 60.5 154 34.4
Thecc.06G229400 Theobroma cacao HOM05D002234 ORTHO05D002254 2.4e-07 60.5 154 31.2
C04p72510 Brassica napus HOM05D000051 ORTHO05D000015 3.1e-07 60.1 88 40.9
BolC4t28739H Brassica oleracea HOM05D000051 ORTHO05D000015 3.1e-07 60.1 88 40.9
COL.COLO4_31843 Corchorus olitorius HOM05D002234 ORTHO05D002254 3.1e-07 60.1 153 32.0
PSO210G7268 Papaver somniferum HOM05D002234 ORTHO05D002254 3.1e-07 60.1 138 32.6
MSTRG.14623 Avicennia marina HOM05D002234 ORTHO05D002254 5.2e-07 59.3 141 31.9
Gohir.A05G174100 Gossypium hirsutum HOM05D002234 ORTHO05D002254 1.2e-06 58.2 153 30.1
Gohir.D05G177100 Gossypium hirsutum HOM05D002234 ORTHO05D002254 1.2e-06 58.2 153 30.1
Gorai.009G182500 Gossypium raimondii HOM05D002234 ORTHO05D002254 1.2e-06 58.2 153 30.1
Lj6g0013923 Lotus japonicus HOM05D002234 ORTHO05D002254 1.2e-06 58.2 142 33.1
MBI19_g03680_MAGBIO Magnolia biondii HOM05D002234 ORTHO05D002254 1.2e-06 58.2 140 32.9
CDE04G1021 Ceratophyllum demersum HOM05D002234 ORTHO05D002254 1.5e-06 57.8 140 32.1
Pp3c15_4460 Physcomitrium patens HOM05D002234 ORTHO05D002254 1.5e-06 57.8 140 31.4
QL05p084699 Quercus lobata HOM05D007122 ORTHO05D008918 1.5e-06 57.8 53 52.8
BcaC06g35517 Brassica carinata HOM05D006432 ORTHO05D008257 2.0e-06 57.4 228 29.8
THA.LOC104812983 Tarenaya hassleriana HOM05D002234 ORTHO05D002254 2.0e-06 57.4 140 31.4
unitig_744.g24517 Utricularia gibba HOM05D002234 ORTHO05D002254 2.6e-06 57.0 168 28.6
CDE07G0233 Ceratophyllum demersum HOM05D002234 ORTHO05D002254 3.4e-06 56.6 140 32.1
SMO367G0795 Selaginella moellendorffii HOM05D002234 ORTHO05D002254 3.4e-06 56.6 153 30.7
DCAR_027858 Daucus carota HOM05D002234 ORTHO05D002254 4.4e-06 56.2 140 33.6
Hund23427 Selenicereus undatus HOM05D002234 ORTHO05D002254 4.4e-06 56.2 143 32.2
Carub.0003s2366 Capsella rubella HOM05D006432 ORTHO05D008257 7.6e-06 55.5 228 27.6
Zm00001eb423920 Zea mays HOM05D002234 ORTHO05D002254 7.6e-06 55.5 154 28.6
SEGI_22906 Sequoiadendron giganteum HOM05D002234 ORTHO05D002254 9.9e-06 55.1 140 32.1


User provided reference genes

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