Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib133G0413 Durio zibethinus HOM05D008367 ORTHO05D010529 5.7e-107 391.0 201 100.0
Duzib138G1787 Durio zibethinus HOM05D008367 ORTHO05D010529 4.1e-73 278.5 192 83.9
Thecc.01G258200 Theobroma cacao HOM05D008367 ORTHO05D010529 2.3e-68 262.7 190 78.9
COL.COLO4_05894 Corchorus olitorius HOM05D008367 ORTHO05D010529 4.5e-56 221.9 196 70.4
Gohir.D07G155080 Gossypium hirsutum HOM05D008367 ORTHO05D010529 1.6e-53 213.4 194 68.0
Gorai.001G177400 Gossypium raimondii HOM05D008367 ORTHO05D010529 1.6e-53 213.4 194 68.0
Gohir.A07G148700 Gossypium hirsutum HOM05D008367 ORTHO05D010529 2.3e-52 209.5 194 67.0
QL09p038772 Quercus lobata HOM05D008367 ORTHO05D010529 1.5e-30 137.1 196 48.0
Ciclev10022407m.g Citrus clementina HOM05D008367 ORTHO05D010529 3.3e-30 136.0 202 49.5
Potri.002G038400 Populus trichocarpa HOM05D008367 ORTHO05D010529 1.8e-28 130.2 198 47.0
MD05G1197200 Malus domestica HOM05D008367 ORTHO05D010529 3.1e-28 129.4 205 45.4
Gohir.D11G136600 Gossypium hirsutum HOM05D008367 ORTHO05D010529 1.2e-27 127.5 188 51.6
Cfa002424 Carpinus fangiana HOM05D008367 ORTHO05D010529 1.5e-27 127.1 191 44.5
CiPaw.03G264200 Carya illinoinensis HOM05D008367 ORTHO05D010529 2.0e-27 126.7 201 45.3
Gorai.007G146300 Gossypium raimondii HOM05D008367 ORTHO05D010529 4.4e-27 125.6 188 51.1
Sabra02G0030800 Salix brachista HOM05D008367 ORTHO05D010529 7.6e-27 124.8 198 47.5
Haze_24631 Corylus avellana HOM05D008367 ORTHO05D010529 1.7e-26 123.6 191 43.5
RcHm_v2.0_Chr6g0288121 Rosa chinensis HOM05D008367 ORTHO05D010529 3.8e-26 122.5 189 45.0
Sabra05G0173000 Salix brachista HOM05D008367 ORTHO05D010529 2.4e-25 119.8 200 42.0
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 4.2e-25 119.0 198 42.4
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 7.1e-25 118.2 189 42.9
Manes.13G034100 Manihot esculenta HOM05D008367 ORTHO05D010529 9.2e-25 117.9 194 42.8
Medtr7g096950 Medicago truncatula HOM05D008367 ORTHO05D010529 1.2e-24 117.5 198 41.9
Potri.005G224200 Populus trichocarpa HOM05D008367 ORTHO05D010529 6.0e-24 115.2 193 42.0
Cc01_g18350 Coffea canephora HOM05D008367 ORTHO05D010529 2.3e-23 113.2 204 38.7
FvH4_2g21490 Fragaria vesca HOM05D008367 ORTHO05D010529 2.3e-23 113.2 188 41.0
Psat3g056920 Pisum sativum HOM05D008367 ORTHO05D010529 5.1e-23 112.1 192 43.8
Glyma.03G163200 Glycine max HOM05D008367 ORTHO05D010529 6.6e-23 111.7 190 44.2
Lj1g0003464 Lotus japonicus HOM05D008367 ORTHO05D010529 6.6e-23 111.7 196 42.9
Rhsim01G0263900 Rhododendron simsii HOM05D008367 ORTHO05D010529 1.5e-22 110.5 189 42.3
Glyma.19G164700 Glycine max HOM05D008367 ORTHO05D010529 2.5e-22 109.8 190 43.7
Atru.chr5.1688 Acer truncatum HOM05D008367 ORTHO05D010529 3.3e-22 109.4 183 43.2
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 9.6e-22 107.8 186 40.3
Cpa.g.sc165.10 Carica papaya HOM05D008367 ORTHO05D010529 1.6e-21 107.1 186 44.1
Ca_08676_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 2.8e-21 106.3 202 39.6
Rhsim13G0035000 Rhododendron simsii HOM05D008367 ORTHO05D010529 8.1e-21 104.8 198 39.9
Phvul.001G161100 Phaseolus vulgaris HOM05D008367 ORTHO05D010529 1.1e-20 104.4 188 41.0
Prupe.8G223700 Prunus persica HOM05D008367 ORTHO05D010529 1.4e-20 104.0 199 40.2
VMungo1383G3617 Vigna mungo HOM05D008367 ORTHO05D010529 2.4e-20 103.2 184 41.8
Hma1.2p1_0273F.1_g109700 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 3.1e-20 102.8 183 37.7
Actinidia25788 Actinidia chinensis HOM05D008367 ORTHO05D010529 1.2e-19 100.9 186 43.0
Ca_08710_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 1.5e-19 100.5 202 40.6
Ca_08702_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 5.8e-19 98.6 198 41.9
Eucgr.B01554 Eucalyptus grandis HOM05D008367 ORTHO05D010529 9.9e-19 97.8 185 40.5
Lalb_Chr01g0012251 Lupinus albus HOM05D008367 ORTHO05D010529 9.9e-19 97.8 193 38.9
Actinidia09550 Actinidia chinensis HOM05D008367 ORTHO05D010529 3.8e-18 95.9 187 40.6
Nitab4.5_0000470g0140 Nicotiana tabacum HOM05D008367 ORTHO05D010529 6.4e-18 95.1 192 40.1
CANSAT01G1417 Cannabis sativa HOM05D008367 ORTHO05D010529 7.1e-17 91.7 206 39.3
Actinidia27694 Actinidia chinensis HOM05D008367 ORTHO05D010529 2.7e-16 89.7 171 38.0
Hma1.2p1_0576F.1_g182070 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 6.0e-16 88.6 192 35.9
CAN.G896.7 Capsicum annuum HOM05D008367 ORTHO05D010529 3.0e-15 86.3 186 38.7
Migut.N02203 Erythranthe guttata HOM05D008367 ORTHO05D010529 3.6e-13 79.3 197 33.0
Oeu025845.1 Olea europaea HOM05D008367 ORTHO05D010529 3.6e-13 79.3 195 33.8
PGSC0003DMG400010298 Solanum tuberosum HOM05D008367 ORTHO05D010529 3.6e-13 79.3 178 37.1
Sopen09g028370 Solanum pennellii HOM05D008367 ORTHO05D010529 4.8e-13 79.0 183 40.4
Aqoxy5G00249 Aquilegia oxysepala HOM05D007526 ORTHO05D009350 3.4e-11 72.8 206 32.5
THA.LOC104814518 Tarenaya hassleriana HOM05D013395 ORTHO05D015261 3.4e-11 72.8 178 36.5
SGA_v2.0_scaffold80G25773 Striga asiatica HOM05D008367 ORTHO05D010529 1.4e-09 67.4 195 29.7
Rhsim13G0034900 Rhododendron simsii HOM05D009321 ORTHO05D010529 4.2e-09 65.9 116 40.5
DCAR_007739 Daucus carota HOM05D008367 ORTHO05D010529 9.3e-09 64.7 113 36.3
Nn3g19655 Nelumbo nucifera HOM05D007526 ORTHO05D009350 9.3e-09 64.7 225 30.2
Thecc.04G255400 Theobroma cacao HOM05D007526 ORTHO05D009350 1.2e-08 64.3 205 29.3
Dinv22407 Davidia involucrata HOM05D008367 ORTHO05D010529 1.6e-08 63.9 177 33.3
Haze_11381 Corylus avellana HOM05D007526 ORTHO05D009350 2.7e-08 63.2 201 31.3
TAR636G0759 Trochodendron aralioides HOM05D007526 ORTHO05D009350 2.7e-08 63.2 192 32.3
RcHm_v2.0_Chr4g0393211 Rosa chinensis HOM05D007526 ORTHO05D009350 3.5e-08 62.8 205 30.2
TAR365G0977 Trochodendron aralioides HOM05D007526 ORTHO05D009350 3.5e-08 62.8 199 33.7
Duzib151G1045 Durio zibethinus HOM05D007526 ORTHO05D009350 6.0e-08 62.0 202 27.7
Prupe.1G039600 Prunus persica HOM05D007526 ORTHO05D009350 7.9e-08 61.6 217 29.0
Cpa.g.sc44.57 Carica papaya HOM05D007526 ORTHO05D009350 1.8e-07 60.5 208 30.8
Glyma.10G006400 Glycine max HOM05D007526 ORTHO05D009350 5.1e-07 58.9 209 30.1
Lj6g0011756 Lotus japonicus HOM05D007526 ORTHO05D009350 5.1e-07 58.9 193 32.1
Cfa022958 Carpinus fangiana HOM05D007526 ORTHO05D009350 8.7e-07 58.2 201 31.8
Glyma.20G209500 Glycine max HOM05D007526 ORTHO05D009350 1.1e-06 57.8 200 28.5
MBI07_g16245_MAGBIO Magnolia biondii HOM05D007526 ORTHO05D009350 1.1e-06 57.8 188 36.2
DCAR_027319 Daucus carota HOM05D007526 ORTHO05D009350 1.5e-06 57.4 178 29.8
Gorai.006G253500 Gossypium raimondii HOM05D007526 ORTHO05D009350 1.5e-06 57.4 211 29.4
Potri.008G167200 Populus trichocarpa HOM05D007526 ORTHO05D009350 1.5e-06 57.4 185 31.4
VMungo0720G1630 Vigna mungo HOM05D007526 ORTHO05D009350 1.5e-06 57.4 199 30.2
Glyma.10G181000 Glycine max HOM05D007526 ORTHO05D009350 2.5e-06 56.6 198 31.8
Ciclev10005975m.g Citrus clementina HOM05D007526 ORTHO05D009350 3.3e-06 56.2 199 30.2
FvH4_4g03670 Fragaria vesca HOM05D007526 ORTHO05D009350 3.3e-06 56.2 205 29.8
FAN12G2381 Fragaria x ananassa HOM05D007526 ORTHO05D009350 3.3e-06 56.2 205 29.8
Duzib212G0007 Durio zibethinus HOM05D007526 ORTHO05D009350 4.3e-06 55.8 209 27.8
Glyma.02G005400 Glycine max HOM05D007526 ORTHO05D009350 4.3e-06 55.8 204 30.9
MD16G1219200 Malus domestica HOM05D007526 ORTHO05D009350 4.3e-06 55.8 220 29.5
Nn1g02762 Nelumbo nucifera HOM05D007526 ORTHO05D009350 5.6e-06 55.5 222 32.0
CiPaw.01G184600 Carya illinoinensis HOM05D007526 ORTHO05D009350 7.4e-06 55.1 196 31.1
Lsat_1_v5_gn_8_93101 Lactuca sativa HOM05D008367 ORTHO05D010529 7.4e-06 55.1 186 30.6
Rhsim04G0182300 Rhododendron simsii HOM05D007526 ORTHO05D009350 7.4e-06 55.1 209 31.1
Gohir.A09G229800 Gossypium hirsutum HOM05D007526 ORTHO05D009350 9.6e-06 54.7 211 29.4
Oeu055231.1 Olea europaea HOM05D007526 ORTHO05D009350 9.6e-06 54.7 192 30.2


User provided reference genes

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