Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 4.6e-77 291.2 152 100.0
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 3.9e-76 288.1 152 99.3
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 2.8e-26 122.5 112 61.6
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 1.8e-25 119.8 112 59.8
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 1.5e-22 110.2 112 57.1
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 2.3e-20 102.8 113 54.9
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 4.0e-20 102.1 110 55.5
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 4.0e-20 102.1 110 56.4
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 8.8e-20 100.9 75 64.0
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 2.4e-17 92.8 76 61.8
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 5.4e-17 91.7 76 60.5
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 2.7e-16 89.4 113 46.9
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 4.5e-16 88.6 115 51.3
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 5.9e-16 88.2 114 47.4
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 7.8e-16 87.8 75 60.0
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 1.0e-15 87.4 76 56.6
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 2.3e-15 86.3 115 47.8
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 2.9e-15 85.9 115 44.3
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 2.9e-15 85.9 115 47.0
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 3.8e-15 85.5 114 45.6
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 3.8e-15 85.5 112 44.6
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 3.8e-15 85.5 115 48.7
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 5.0e-15 85.1 116 48.3
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 6.6e-15 84.7 115 46.1
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.5e-14 83.6 79 57.0
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 3.3e-14 82.4 76 59.2
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 5.6e-14 81.6 77 61.0
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 9.5e-14 80.9 76 53.9
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 9.5e-14 80.9 76 56.6
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 1.2e-13 80.5 80 53.8
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 1.6e-13 80.1 109 44.0
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 1.6e-13 80.1 71 56.3
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 1.6e-13 80.1 113 43.4
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 2.8e-13 79.3 113 47.8
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 2.8e-13 79.3 75 53.3
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 3.6e-13 79.0 79 54.4
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 4.7e-13 78.6 76 55.3
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 6.1e-13 78.2 125 44.0
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 6.1e-13 78.2 77 54.5
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 6.1e-13 78.2 78 57.7
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 6.1e-13 78.2 78 57.7
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 1.4e-12 77.0 126 39.7
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 2.3e-12 76.3 77 49.4
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 3.0e-12 75.9 112 42.9
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 3.0e-12 75.9 77 51.9
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 5.2e-12 75.1 79 50.6
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 5.2e-12 75.1 79 50.6
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 8.9e-12 74.3 76 53.9
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 1.2e-11 73.9 77 49.4
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 1.2e-11 73.9 79 46.8
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 2.0e-11 73.2 79 50.6
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 2.0e-11 73.2 101 43.6
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 2.0e-11 73.2 110 43.6
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 2.0e-11 73.2 112 42.0
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 2.0e-11 73.2 75 56.0
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 2.6e-11 72.8 70 57.1
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 4.4e-11 72.0 80 51.2
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 4.4e-11 72.0 80 50.0
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 7.5e-11 71.2 76 53.9
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 1.3e-10 70.5 76 47.4
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 1.3e-10 70.5 78 44.9
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 2.2e-10 69.7 114 42.1
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 2.9e-10 69.3 75 56.0
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 3.7e-10 68.9 118 37.3
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 6.4e-10 68.2 76 46.1
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 6.4e-10 68.2 76 46.1
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 8.3e-10 67.8 76 50.0
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 1.1e-09 67.4 97 43.3
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 1.4e-09 67.0 81 44.4
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 1.4e-09 67.0 68 48.5
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 3.2e-09 65.9 76 46.1
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 3.2e-09 65.9 76 46.1
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 3.2e-09 65.9 91 44.0
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 4.1e-09 65.5 76 46.1
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 4.1e-09 65.5 76 46.1
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 4.1e-09 65.5 76 46.1
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 5.4e-09 65.1 113 38.9
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 1.2e-08 63.9 77 44.2
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 3.5e-08 62.4 84 47.6
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 4.6e-08 62.0 71 49.3
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 4.6e-08 62.0 78 48.7
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 5.9e-08 61.6 119 33.6
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 1.0e-07 60.8 76 44.7
Lj5g0009856 Lotus japonicus HOM05D007563 ORTHO05D009546 1.0e-07 60.8 70 45.7
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 1.3e-07 60.5 76 40.8
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 6.6e-07 58.2 81 45.7
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 1.1e-06 57.4 88 42.0


User provided reference genes

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