Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib132G0922 Durio zibethinus HOM05D007310 ORTHO05D002375 1.7e-114 416.0 214 100.0
Duzib248G0762 Durio zibethinus HOM05D007310 ORTHO05D002375 1.3e-32 144.1 175 51.4
Thecc.02G133200 Theobroma cacao HOM05D007310 ORTHO05D002375 3.1e-26 122.9 172 45.9
COL.COLO4_32323 Corchorus olitorius HOM05D007310 ORTHO05D002375 5.2e-18 95.5 108 50.9
Lalb_Chr09g0326871 Lupinus albus HOM05D007310 ORTHO05D002375 1.5e-17 94.0 109 46.8
SalBow8G1210 Salvia bowleyana HOM05D007310 ORTHO05D002375 2.2e-16 90.1 107 51.4
Gorai.005G224000 Gossypium raimondii HOM05D007310 ORTHO05D002375 1.9e-15 87.0 105 52.4
Aa31LG8G12500 Aethionema arabicum HOM05D007310 ORTHO05D002375 3.2e-15 86.3 87 54.0
Migut.B00577 Erythranthe guttata HOM05D007310 ORTHO05D002375 9.2e-15 84.7 103 47.6
Solyc01g105600.3 Solanum lycopersicum HOM05D007310 ORTHO05D002375 1.2e-14 84.3 101 47.5
Sopen01g048060 Solanum pennellii HOM05D007310 ORTHO05D002375 2.1e-14 83.6 118 43.2
Gohir.D02G199400 Gossypium hirsutum HOM05D007310 ORTHO05D002375 2.7e-14 83.2 105 49.5
Cfa005685 Carpinus fangiana HOM05D007310 ORTHO05D002375 3.5e-14 82.8 134 43.3
Ciclev10030152m.g Citrus clementina HOM05D007310 ORTHO05D002375 4.6e-14 82.4 99 45.5
CARHR104210 Cardamine hirsuta HOM05D007310 ORTHO05D002375 1.0e-13 81.3 110 45.5
AT2G14095 Arabidopsis thaliana HOM05D007310 ORTHO05D002375 3.9e-13 79.3 163 35.0
CAN.G523.36 Capsicum annuum HOM05D007310 ORTHO05D002375 6.6e-13 78.6 118 43.2
Eucgr.I02631 Eucalyptus grandis HOM05D007310 ORTHO05D002375 6.6e-13 78.6 140 41.4
Thhalv10022863m.g Eutrema salsugineum HOM05D007310 ORTHO05D002375 6.6e-13 78.6 94 51.1
FvH4_2g13500 Fragaria vesca HOM05D007310 ORTHO05D002375 8.6e-13 78.2 141 39.0
FAN24G3359 Fragaria x ananassa HOM05D007310 ORTHO05D004145 8.6e-13 78.2 141 39.0
Carub.0003s2834 Capsella rubella HOM05D007310 ORTHO05D002375 1.9e-12 77.0 86 50.0
FAN27G1440 Fragaria x ananassa HOM05D007310 ORTHO05D002375 7.3e-12 75.1 110 42.7
VMungo0251G1327 Vigna mungo HOM05D007310 ORTHO05D002375 1.2e-11 74.3 114 37.7
Nitab4.5_0006625g0010 Nicotiana tabacum HOM05D007310 ORTHO05D002375 1.6e-11 73.9 118 39.8
PGSC0003DMG400012536 Solanum tuberosum HOM05D007310 ORTHO05D002375 1.6e-11 73.9 118 41.5
Haze_10565 Corylus avellana HOM05D007310 ORTHO05D002375 2.1e-11 73.6 133 36.1
GSVIVG01015685001 Vitis vinifera HOM05D007310 ORTHO05D002375 2.1e-11 73.6 110 45.5
Peaxi162Scf00299g00914 Petunia axillaris HOM05D007310 ORTHO05D002375 2.8e-11 73.2 88 50.0
Potri.001G310100 Populus trichocarpa HOM05D007310 ORTHO05D002375 1.4e-10 70.9 95 40.0
CiPaw.05G032100 Carya illinoinensis HOM05D007310 ORTHO05D002375 1.8e-10 70.5 89 44.9
Dinv24166 Davidia involucrata HOM05D007310 ORTHO05D002375 4.0e-10 69.3 100 39.0
AL3G45790 Arabidopsis lyrata HOM05D007310 ORTHO05D002375 5.2e-10 68.9 163 34.4
SGA_v2.0_scaffold14G07142 Striga asiatica HOM05D007310 ORTHO05D002375 5.2e-10 68.9 78 51.3
TWI14G0938 Tripterygium wilfordii HOM05D007310 ORTHO05D002375 6.9e-10 68.6 90 40.0
CANSAT11G0123 Cannabis sativa HOM05D007310 ORTHO05D002375 1.5e-09 67.4 95 36.8
Medtr4g093820 Medicago truncatula HOM05D007310 ORTHO05D002375 1.5e-09 67.4 120 37.5
Cc02_g21140 Coffea canephora HOM05D007310 ORTHO05D002375 2.0e-09 67.0 114 36.8
TPR.G2868 Trifolium pratense HOM05D007310 ORTHO05D002375 2.0e-09 67.0 140 34.3
Potri.017G050000 Populus trichocarpa HOM05D007310 ORTHO05D002375 5.8e-09 65.5 100 38.0
PSO761G0222 Papaver somniferum HOM05D007310 ORTHO05D002375 7.6e-09 65.1 86 41.9
Nitab4.5_0000863g0020 Nicotiana tabacum HOM05D007310 ORTHO05D002375 1.7e-08 63.9 101 42.6
Psat7g100440 Pisum sativum HOM05D007310 ORTHO05D002375 1.7e-08 63.9 120 35.0
Prupe.8G066300 Prunus persica HOM05D007310 ORTHO05D002375 1.7e-08 63.9 87 37.9
Sabra16G0196000 Salix brachista HOM05D007310 ORTHO05D002375 1.7e-08 63.9 95 38.9
Actinidia28038 Actinidia chinensis HOM05D007310 ORTHO05D002375 2.2e-08 63.5 107 39.3
arahy.Tifrunner.gnm1.ann1.KVX74B Arachis hypogaea HOM05D007310 ORTHO05D002375 2.2e-08 63.5 144 34.0
arahy.Tifrunner.gnm1.ann1.U7VQVC Arachis hypogaea HOM05D007310 ORTHO05D002375 2.2e-08 63.5 144 34.0
AUR62011722 Chenopodium quinoa HOM05D007310 ORTHO05D002375 2.2e-08 63.5 90 43.3
PSO700G0139 Papaver somniferum HOM05D007310 ORTHO05D002375 2.9e-08 63.2 78 41.0
QL11p023211 Quercus lobata HOM05D007310 ORTHO05D002375 3.8e-08 62.8 133 33.1
Manes.07G038100 Manihot esculenta HOM05D007310 ORTHO05D002375 6.4e-08 62.0 99 40.4
Hma1.2p1_0784F.1_g217300 Hydrangea macrophylla HOM05D007310 ORTHO05D002375 1.4e-07 60.8 79 44.3
Nn5g29980 Nelumbo nucifera HOM05D007310 ORTHO05D002375 1.4e-07 60.8 116 35.3
Oeu022081.1 Olea europaea HOM05D007310 ORTHO05D002375 1.4e-07 60.8 95 41.1
Manes.07G035800 Manihot esculenta HOM05D007310 ORTHO05D002375 1.9e-07 60.5 99 40.4
AUR62012905 Chenopodium quinoa HOM05D007310 ORTHO05D002375 2.4e-07 60.1 90 41.1
EL10Ac9g21224 Beta vulgaris HOM05D007310 ORTHO05D002375 3.2e-07 59.7 82 40.2
BcaB08g34551 Brassica carinata HOM05D007310 ORTHO05D002375 4.2e-07 59.3 136 34.6
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 7.1e-07 58.5 88 43.2
Ca_18369_v3 Cicer arietinum L. HOM05D007310 ORTHO05D002375 1.6e-06 57.4 143 32.2
RcHm_v2.0_Chr7g0236611 Rosa chinensis HOM05D007310 ORTHO05D002375 2.7e-06 56.6 111 36.0
Cpa.g.sc42.21 Carica papaya HOM05D007310 ORTHO05D002375 4.6e-06 55.8 115 37.4
DCAR_021882 Daucus carota HOM05D007310 ORTHO05D002375 6.0e-06 55.5 103 36.9


User provided reference genes

Program Settings