Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib132G0468 Durio zibethinus HOM05D007227 ORTHO05D002252 8.5e-51 203.4 102 100.0
Thecc.02G037700 Theobroma cacao HOM05D007227 ORTHO05D002252 7.2e-34 147.1 107 76.6
Gorai.002G211000 Gossypium raimondii HOM05D007227 ORTHO05D002252 9.8e-31 136.7 106 71.7
Gohir.D01G169400 Gossypium hirsutum HOM05D007227 ORTHO05D002252 3.7e-30 134.8 106 70.8
Gohir.A01G178500 Gossypium hirsutum HOM05D007227 ORTHO05D002252 6.3e-30 134.0 106 71.7
Gohir.D02G233600 Gossypium hirsutum HOM05D007227 ORTHO05D002252 4.2e-26 121.3 111 64.0
Gohir.A03G212200 Gossypium hirsutum HOM05D007227 ORTHO05D002252 7.2e-26 120.6 111 64.0
Gorai.005G261600 Gossypium raimondii HOM05D007227 ORTHO05D002252 8.0e-25 117.1 105 63.8
COL.COLO4_17856 Corchorus olitorius HOM05D007227 ORTHO05D002252 2.7e-20 102.1 102 62.7
CiPaw.05G063200 Carya illinoinensis HOM05D007227 ORTHO05D002252 3.4e-15 85.1 93 50.5
Potri.009G114400 Populus trichocarpa HOM05D007227 ORTHO05D002252 4.9e-14 81.3 88 51.1
Cfa005018 Carpinus fangiana HOM05D007227 ORTHO05D002252 1.4e-13 79.7 97 49.5
QL11p043287 Quercus lobata HOM05D007227 ORTHO05D002252 9.2e-13 77.0 88 51.1
Sabra04G0101600 Salix brachista HOM05D007227 ORTHO05D002252 9.2e-13 77.0 96 47.9
GSVIVG01031940001 Vitis vinifera HOM05D007227 ORTHO05D002252 9.2e-13 77.0 101 48.5
Gorai.010G110400 Gossypium raimondii HOM05D007227 ORTHO05D047527 2.7e-12 75.5 79 60.8
Potri.004G153200 Populus trichocarpa HOM05D007227 ORTHO05D002252 3.5e-12 75.1 101 46.5
Dinv23539 Davidia involucrata HOM05D007227 ORTHO05D002252 1.1e-10 70.1 104 42.3
Lalb_Chr19g0138601 Lupinus albus HOM05D007227 ORTHO05D002252 1.5e-10 69.7 85 49.4
Gohir.D06G095850 Gossypium hirsutum HOM05D007227 ORTHO05D047527 2.5e-10 68.9 78 55.1
CiPaw.06G136700 Carya illinoinensis HOM05D007227 ORTHO05D002252 3.3e-10 68.6 79 46.8
Glyma.11G119200 Glycine max HOM05D007227 ORTHO05D002252 5.6e-10 67.8 80 50.0
Ciclev10029608m.g Citrus clementina HOM05D007227 ORTHO05D002252 7.3e-10 67.4 94 47.9
Manes.15G164600 Manihot esculenta HOM05D007227 ORTHO05D002252 7.3e-10 67.4 95 41.1
Phvul.011G046400 Phaseolus vulgaris HOM05D007227 ORTHO05D002252 9.5e-10 67.0 95 42.1
TWI31G0501 Tripterygium wilfordii HOM05D007227 ORTHO05D002252 9.5e-10 67.0 86 51.2
Dinv42073 Davidia involucrata HOM05D007227 ORTHO05D002252 1.1e-08 63.5 106 39.6
Psat7g141720 Pisum sativum HOM05D007227 ORTHO05D002252 1.1e-08 63.5 100 40.0
arahy.Tifrunner.gnm1.ann1.BHH580 Arachis hypogaea HOM05D007227 ORTHO05D002252 2.3e-08 62.4 83 48.2
Actinidia00511 Actinidia chinensis HOM05D007227 ORTHO05D002252 4.0e-08 61.6 88 38.6
Glyma.04G013400 Glycine max HOM05D007227 ORTHO05D002252 5.2e-08 61.2 102 40.2
TWI79G0288 Tripterygium wilfordii HOM05D007556 ORTHO05D002252 6.8e-08 60.8 109 37.6
Glyma.06G013300 Glycine max HOM05D007227 ORTHO05D002252 8.9e-08 60.5 99 43.4
Manes.17G100100 Manihot esculenta HOM05D007227 ORTHO05D002252 1.2e-07 60.1 86 40.7
Medtr4g069770 Medicago truncatula HOM05D007227 ORTHO05D002252 1.2e-07 60.1 98 42.9
VMungo1127G0518 Vigna mungo HOM05D007227 ORTHO05D002252 1.2e-07 60.1 89 42.7
FAN15G1220 Fragaria x ananassa HOM05D007227 ORTHO05D002252 1.5e-07 59.7 91 39.6
FAN27G2103 Fragaria x ananassa HOM05D007227 ORTHO05D002252 1.5e-07 59.7 91 38.5
TWI75G0964 Tripterygium wilfordii HOM05D007227 ORTHO05D002252 1.5e-07 59.7 85 47.1
Lj3g0002713 Lotus japonicus HOM05D007227 ORTHO05D002252 2.0e-07 59.3 102 39.2
Glyma.02G300900 Glycine max HOM05D007227 ORTHO05D002252 2.6e-07 58.9 106 38.7
PGR142G1531 Punica granatum HOM05D007227 ORTHO05D002252 2.6e-07 58.9 96 40.6
MD10G1078100 Malus domestica HOM05D007227 ORTHO05D002252 3.4e-07 58.5 78 44.9
TPR.G9008 Trifolium pratense HOM05D007227 ORTHO05D002252 3.4e-07 58.5 99 40.4
FvH4_2g08520 Fragaria vesca HOM05D007227 ORTHO05D002252 4.4e-07 58.2 91 39.6
FAN24G3084 Fragaria x ananassa HOM05D007227 ORTHO05D002252 4.4e-07 58.2 91 39.6
Dinv23538 Davidia involucrata HOM05D007556 ORTHO05D002252 5.8e-07 57.8 96 35.4
arahy.Tifrunner.gnm1.ann1.9WD8WJ Arachis hypogaea HOM05D007227 ORTHO05D002252 7.5e-07 57.4 108 40.7
Glyma.12G044400 Glycine max HOM05D007227 ORTHO05D002252 7.5e-07 57.4 94 40.4
MD00G1082000 Malus domestica HOM05D007227 ORTHO05D002252 7.5e-07 57.4 92 38.0
RcHm_v2.0_Chr6g0263881 Rosa chinensis HOM05D007227 ORTHO05D002252 7.5e-07 57.4 81 46.9
TWI31G1433 Tripterygium wilfordii HOM05D007227 ORTHO05D002252 7.5e-07 57.4 103 41.7
Eucgr.I01259 Eucalyptus grandis HOM05D007227 ORTHO05D002252 1.7e-06 56.2 99 36.4
EL10Ac9g21739 Beta vulgaris HOM05D007227 ORTHO05D002252 2.9e-06 55.5 84 44.0
AUR62011338 Chenopodium quinoa HOM05D007227 ORTHO05D002252 4.9e-06 54.7 66 45.5
Prupe.8G099800 Prunus persica HOM05D007227 ORTHO05D002252 4.9e-06 54.7 82 43.9
arahy.Tifrunner.gnm1.ann1.16ZZBQ Arachis hypogaea HOM05D007227 ORTHO05D002252 6.4e-06 54.3 85 42.4
BcaC05g27512 Brassica carinata HOM05D009461 ORTHO05D002252 8.3e-06 53.9 74 43.2
C05p34820 Brassica napus HOM05D009461 ORTHO05D002252 8.3e-06 53.9 74 43.2
Lj1g0025376 Lotus japonicus HOM05D007227 ORTHO05D002252 8.3e-06 53.9 98 38.8


User provided reference genes

Program Settings