Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib128G1750 Durio zibethinus HOM05D003153 ORTHO05D003549 1.6e-85 319.3 152 100.0
Psat6g185760 Pisum sativum HOM05D003153 ORTHO05D003549 2.7e-29 132.5 97 69.1
Gohir.D04G083333 Gossypium hirsutum HOM05D003153 ORTHO05D003549 5.0e-23 111.7 102 57.8
Duzib106G0636 Durio zibethinus HOM05D003153 ORTHO05D003549 3.6e-21 105.5 52 90.4
Thecc.10G068600 Theobroma cacao HOM05D003153 ORTHO05D003549 8.0e-21 104.4 52 88.5
MELO3C012445.2 Cucumis melo HOM05D003153 ORTHO05D003549 1.0e-20 104.0 52 86.5
Cfa001597 Carpinus fangiana HOM05D003153 ORTHO05D003549 1.4e-20 103.6 52 84.6
Haze_16932 Corylus avellana HOM05D003153 ORTHO05D003549 1.4e-20 103.6 52 84.6
Duzib114G1009 Durio zibethinus HOM05D003153 ORTHO05D003549 1.8e-20 103.2 52 86.5
Gorai.003G102200 Gossypium raimondii HOM05D003153 ORTHO05D003549 1.8e-20 103.2 62 74.2
CiPaw.01G276200 Carya illinoinensis HOM05D003153 ORTHO05D003549 2.3e-20 102.8 52 84.6
Gohir.D01G038200 Gossypium hirsutum HOM05D003153 ORTHO05D003549 2.3e-20 102.8 52 86.5
Gohir.D09G169900 Gossypium hirsutum HOM05D003153 ORTHO05D003549 2.3e-20 102.8 52 86.5
Gohir.D09G241600 Gossypium hirsutum HOM05D003153 ORTHO05D003549 2.3e-20 102.8 52 86.5
Gohir.D11G323000 Gossypium hirsutum HOM05D003153 ORTHO05D003549 2.3e-20 102.8 52 86.5
Gorai.001G229900 Gossypium raimondii HOM05D003153 ORTHO05D003549 2.3e-20 102.8 52 86.5
Gorai.012G094100 Gossypium raimondii HOM05D003153 ORTHO05D003549 2.3e-20 102.8 52 86.5
Nn2g13006 Nelumbo nucifera HOM05D003153 ORTHO05D003549 2.3e-20 102.8 52 84.6
TAR636G2783 Trochodendron aralioides HOM05D003153 ORTHO05D003549 2.3e-20 102.8 52 84.6
ClCG05G020840 Citrullus lanatus HOM05D003153 ORTHO05D003549 3.0e-20 102.4 52 84.6
CsaV3_5G036470 Cucumis sativus L. HOM05D003153 ORTHO05D003549 3.0e-20 102.4 52 84.6
PGSC0003DMG400023247 Solanum tuberosum HOM05D003153 ORTHO05D003549 3.0e-20 102.4 52 86.5
vmacro03171 Vaccinium macrocarpon HOM05D003153 ORTHO05D003549 3.0e-20 102.4 52 84.6
Gorai.002G143400 Gossypium raimondii HOM05D003153 ORTHO05D003549 4.0e-20 102.1 53 84.9
Manes.07G102500 Manihot esculenta HOM05D003153 ORTHO05D003549 4.0e-20 102.1 52 84.6
Nitab4.5_0007510g0010 Nicotiana tabacum HOM05D003153 ORTHO05D003549 4.0e-20 102.1 52 84.6
PGR142G1973 Punica granatum HOM05D003153 ORTHO05D003549 4.0e-20 102.1 52 82.7
Sed0013225 Sechium edule HOM05D003153 ORTHO05D003549 4.0e-20 102.1 52 84.6
Aqoxy4G03206 Aquilegia oxysepala HOM05D003153 ORTHO05D003549 5.2e-20 101.7 52 84.6
CiPaw.02G176400 Carya illinoinensis HOM05D003153 ORTHO05D003549 5.2e-20 101.7 52 82.7
Dinv01414 Davidia involucrata HOM05D003153 ORTHO05D003549 6.8e-20 101.3 52 82.7
Dinv11804 Davidia involucrata HOM05D003153 ORTHO05D003549 6.8e-20 101.3 52 84.6
Gohir.A01G133300 Gossypium hirsutum HOM05D003153 ORTHO05D003549 6.8e-20 101.3 52 84.6
Gohir.D01G117900 Gossypium hirsutum HOM05D003153 ORTHO05D003549 6.8e-20 101.3 52 84.6
MD01G1130700 Malus domestica HOM05D003153 ORTHO05D003549 6.8e-20 101.3 52 84.6
MD07G1178800 Malus domestica HOM05D003153 ORTHO05D003549 6.8e-20 101.3 52 84.6
TAR633G2137 Trochodendron aralioides HOM05D003153 ORTHO05D003549 6.8e-20 101.3 52 82.7
Eucgr.G02804 Eucalyptus grandis HOM05D003153 ORTHO05D003549 8.8e-20 100.9 52 82.7
Nn2g10676 Nelumbo nucifera HOM05D003153 ORTHO05D003549 8.8e-20 100.9 52 82.7
Nitab4.5_0000022g0160 Nicotiana tabacum HOM05D003153 ORTHO05D003549 1.2e-19 100.5 52 82.7
vmacro14467 Vaccinium macrocarpon HOM05D003153 ORTHO05D003549 1.2e-19 100.5 50 86.0
CSS0006958 Camellia sinensis var. sinensis HOM05D003153 ORTHO05D003549 1.5e-19 100.1 52 80.8
Os08g0478200 Oryza sativa ssp. japonica HOM05D003153 ORTHO05D003549 1.5e-19 100.1 52 80.8
QL08p056772 Quercus lobata HOM05D003153 ORTHO05D003549 1.5e-19 100.1 52 82.7
Sed0021432 Sechium edule HOM05D003153 ORTHO05D003549 1.5e-19 100.1 52 82.7
Dinv32792 Davidia involucrata HOM05D003153 ORTHO05D003549 2.0e-19 99.8 52 80.8
Gohir.A05G345000 Gossypium hirsutum HOM05D003153 ORTHO05D003549 2.0e-19 99.8 52 82.7
Gorai.005G219300 Gossypium raimondii HOM05D003153 ORTHO05D003549 2.0e-19 99.8 52 84.6
Atru.chr12.646 Acer truncatum HOM05D003153 ORTHO05D003549 2.6e-19 99.4 52 78.8
Atru.chr12.673 Acer truncatum HOM05D003153 ORTHO05D003549 2.6e-19 99.4 52 78.8
FvH4_7g20110 Fragaria vesca HOM05D003153 ORTHO05D003549 2.6e-19 99.4 52 80.8
FAN03G1468 Fragaria x ananassa HOM05D003153 ORTHO05D003549 2.6e-19 99.4 52 80.8
FAN06G2026 Fragaria x ananassa HOM05D003153 ORTHO05D003549 2.6e-19 99.4 52 80.8
RcHm_v2.0_Chr1g0364071 Rosa chinensis HOM05D003153 ORTHO05D003549 2.6e-19 99.4 52 80.8
Sp5g09960 Schrenkiella parvula HOM05D003153 ORTHO05D003549 3.4e-19 99.0 52 80.8
TWI63G1675 Tripterygium wilfordii HOM05D003153 ORTHO05D003549 3.4e-19 99.0 52 80.8
BcaC07g39600 Brassica carinata HOM05D003153 ORTHO05D003549 4.4e-19 98.6 52 80.8
A09p45360 Brassica napus HOM05D003153 ORTHO05D003549 4.4e-19 98.6 52 80.8
C08p27540 Brassica napus HOM05D003153 ORTHO05D003549 4.4e-19 98.6 52 80.8
BolC8t50374H Brassica oleracea HOM05D003153 ORTHO05D003549 4.4e-19 98.6 52 80.8
BraA09t40000Z Brassica rapa HOM05D003153 ORTHO05D003549 4.4e-19 98.6 52 80.8
Thhalv10010770m.g Eutrema salsugineum HOM05D003153 ORTHO05D003549 4.4e-19 98.6 52 80.8
Gorai.006G232900 Gossypium raimondii HOM05D003153 ORTHO05D003549 4.4e-19 98.6 52 82.7
Prupe.2G217900 Prunus persica HOM05D003153 ORTHO05D003549 4.4e-19 98.6 52 78.8
Actinidia24078 Actinidia chinensis HOM05D003153 ORTHO05D003549 5.7e-19 98.2 52 80.8
CAN.G224.11 Capsicum annuum HOM05D003153 ORTHO05D003549 5.7e-19 98.2 52 80.8
CAN.G553.14 Capsicum annuum HOM05D003153 ORTHO05D003549 5.7e-19 98.2 52 80.8
Nitab4.5_0002129g0130 Nicotiana tabacum HOM05D003153 ORTHO05D003549 5.7e-19 98.2 52 80.8
PSO384G3022 Papaver somniferum HOM05D003153 ORTHO05D003549 5.7e-19 98.2 50 82.0
Peaxi162Scf00123g01121 Petunia axillaris HOM05D003153 ORTHO05D003549 5.7e-19 98.2 52 80.8
Peaxi162Scf00389g00810 Petunia axillaris HOM05D003153 ORTHO05D003549 5.7e-19 98.2 52 80.8
Solyc11g072450.2 Solanum lycopersicum HOM05D003153 ORTHO05D003549 5.7e-19 98.2 52 80.8
Sopen11g030090 Solanum pennellii HOM05D003153 ORTHO05D003549 5.7e-19 98.2 52 80.8
PGSC0003DMG400027374 Solanum tuberosum HOM05D003153 ORTHO05D003549 5.7e-19 98.2 52 80.8
THA.LOC104823507 Tarenaya hassleriana HOM05D003153 ORTHO05D003549 5.7e-19 98.2 52 76.9
Zm00001eb038370 Zea mays HOM05D003153 ORTHO05D003549 5.7e-19 98.2 52 76.9
Actinidia03747 Actinidia chinensis HOM05D003153 ORTHO05D003549 7.5e-19 97.8 52 78.8
Cc01_g11570 Coffea canephora HOM05D003153 ORTHO05D003549 7.5e-19 97.8 52 78.8
Glyma.20G177700 Glycine max HOM05D003153 ORTHO05D003549 7.5e-19 97.8 52 78.8
Medtr1g095830 Medicago truncatula HOM05D003153 ORTHO05D003549 7.5e-19 97.8 52 78.8
Nitab4.5_0015510g0010 Nicotiana tabacum HOM05D003153 ORTHO05D003549 7.5e-19 97.8 51 82.4
GSVIVG01016324001 Vitis vinifera HOM05D003153 ORTHO05D003549 7.5e-19 97.8 52 76.9
Carub.0005s1866 Capsella rubella HOM05D003153 ORTHO05D003549 9.8e-19 97.4 52 78.8
Hund08389 Selenicereus undatus HOM05D003153 ORTHO05D003549 9.8e-19 97.4 52 78.8
TPR.G1809 Trifolium pratense HOM05D003153 ORTHO05D003549 9.8e-19 97.4 52 78.8
Aa31LG10G7410 Aethionema arabicum HOM05D003153 ORTHO05D003549 1.3e-18 97.1 52 73.1
BcaB01g00381 Brassica carinata HOM05D003153 ORTHO05D003549 1.3e-18 97.1 52 80.8
Lalb_Chr21g0305931 Lupinus albus HOM05D003153 ORTHO05D003549 1.3e-18 97.1 52 76.9
MBI19_g11837_MAGBIO Magnolia biondii HOM05D003153 ORTHO05D003549 1.3e-18 97.1 52 75.0
PSO339G4741 Papaver somniferum HOM05D003153 ORTHO05D003549 1.3e-18 97.1 50 80.0
ATR0693G204 Amborella trichopoda HOM05D003153 ORTHO05D003549 1.7e-18 96.7 50 86.0
CANSAT35G1164 Cannabis sativa HOM05D003153 ORTHO05D003549 1.7e-18 96.7 52 76.9
HanXRQChr06g0164581 Helianthus annuus HOM05D003153 ORTHO05D003549 1.7e-18 96.7 52 78.8
Lsat_1_v5_gn_6_26321 Lactuca sativa HOM05D003153 ORTHO05D003549 1.7e-18 96.7 52 78.8
Lalb_Chr02g0141911 Lupinus albus HOM05D003153 ORTHO05D003549 1.7e-18 96.7 51 78.4
SalBow3G0590 Salvia bowleyana HOM05D003153 ORTHO05D003549 1.7e-18 96.7 52 75.0
CDE06G0464 Ceratophyllum demersum HOM05D003153 ORTHO05D003549 2.2e-18 96.3 50 84.0
DCAR_018836 Daucus carota HOM05D003153 ORTHO05D003549 2.2e-18 96.3 52 76.9
Lj2A1036T53 Lonicera japonica HOM05D003153 ORTHO05D003549 2.2e-18 96.3 52 76.9
Manes.10G043000 Manihot esculenta HOM05D003153 ORTHO05D003549 2.2e-18 96.3 50 80.0
CSS0048017 Camellia sinensis var. sinensis HOM05D003153 ORTHO05D003549 2.8e-18 95.9 52 76.9
SGA_v2.0_scaffold12G06137 Striga asiatica HOM05D003153 ORTHO05D008895 2.8e-18 95.9 57 68.4
Actinidia07114 Actinidia chinensis HOM05D003153 ORTHO05D003549 3.7e-18 95.5 52 78.8
A03p48820 Brassica napus HOM05D003153 ORTHO05D003549 3.7e-18 95.5 52 76.9
A04p07100 Brassica napus HOM05D003153 ORTHO05D003549 3.7e-18 95.5 52 76.9
BraA03t13982Z Brassica rapa HOM05D003153 ORTHO05D003549 3.7e-18 95.5 52 76.9
DCAR_015561 Daucus carota HOM05D003153 ORTHO05D003549 3.7e-18 95.5 50 80.0
Thhalv10017326m.g Eutrema salsugineum HOM05D003153 ORTHO05D003549 3.7e-18 95.5 52 78.8
Oeu017392.1 Olea europaea HOM05D003153 ORTHO05D003549 3.7e-18 95.5 52 76.9
TWI38G1590 Tripterygium wilfordii HOM05D003153 ORTHO05D003549 3.7e-18 95.5 52 78.8
unitig_61.g26168 Utricularia gibba HOM05D003153 ORTHO05D003549 3.7e-18 95.5 52 75.0
MSTRG.21145 Avicennia marina HOM05D003153 ORTHO05D003549 4.9e-18 95.1 52 75.0
Migut.N02621 Erythranthe guttata HOM05D003153 ORTHO05D003549 4.9e-18 95.1 52 76.9
HanXRQChr11g0351551 Helianthus annuus HOM05D003153 ORTHO05D003549 4.9e-18 95.1 52 76.9
HanXRQChr13g0401541 Helianthus annuus HOM05D003153 ORTHO05D003549 4.9e-18 95.1 52 76.9
Lsat_1_v5_gn_1_50021 Lactuca sativa HOM05D003153 ORTHO05D003549 4.9e-18 95.1 52 76.9
Oeu059106.1 Olea europaea HOM05D003153 ORTHO05D003549 4.9e-18 95.1 51 78.4
SEGI_02420 Sequoiadendron giganteum HOM05D003153 ORTHO05D003549 4.9e-18 95.1 52 73.1
THA.LOC104803185 Tarenaya hassleriana HOM05D003153 ORTHO05D003549 4.9e-18 95.1 52 75.0
EL10Ac9g22446 Beta vulgaris HOM05D003153 ORTHO05D003549 6.3e-18 94.7 52 75.0
Migut.D02181 Erythranthe guttata HOM05D003153 ORTHO05D003549 6.3e-18 94.7 52 75.0
Sc15g0001660 Simmondsia chinensis HOM05D003153 ORTHO05D003549 6.3e-18 94.7 52 73.1
HPP92_000637 Vanilla planifolia HOM05D003153 ORTHO05D003549 6.3e-18 94.7 52 76.9
C07p46910 Brassica napus HOM05D003153 ORTHO05D003549 8.3e-18 94.4 52 75.0
BolC7t45207H Brassica oleracea HOM05D003153 ORTHO05D003549 8.3e-18 94.4 52 75.0
AUR62036269 Chenopodium quinoa HOM05D003153 ORTHO05D003549 8.3e-18 94.4 51 76.5
Glyma.10G213400 Glycine max HOM05D003153 ORTHO05D003549 8.3e-18 94.4 52 75.0
arahy.Tifrunner.gnm1.ann1.GW1PTG Arachis hypogaea HOM05D003153 ORTHO05D003549 1.1e-17 94.0 52 76.9
MSTRG.18641 Avicennia marina HOM05D003153 ORTHO05D003549 1.1e-17 94.0 52 73.1
BcaC02g09267 Brassica carinata HOM05D003153 ORTHO05D003549 1.1e-17 94.0 52 73.1
C04p40680 Brassica napus HOM05D003153 ORTHO05D003549 1.1e-17 94.0 52 73.1
BolC4t25651H Brassica oleracea HOM05D003153 ORTHO05D003549 1.1e-17 94.0 52 73.1
Sabra10G0168500 Salix brachista HOM05D003153 ORTHO05D003549 1.1e-17 94.0 52 75.0
Sc06g0010600 Simmondsia chinensis HOM05D003153 ORTHO05D003549 1.1e-17 94.0 51 74.5
BcaB02g08579 Brassica carinata HOM05D003153 ORTHO05D003549 1.4e-17 93.6 52 75.0
Oeu012671.1 Olea europaea HOM05D003153 ORTHO05D003549 1.4e-17 93.6 52 73.1
AUR62039719 Chenopodium quinoa HOM05D003153 ORTHO05D003549 1.8e-17 93.2 52 73.1
Ciclev10032923m.g Citrus clementina HOM05D003153 ORTHO05D003549 1.8e-17 93.2 52 73.1
COL.COLO4_23730 Corchorus olitorius HOM05D003153 ORTHO05D003549 1.8e-17 93.2 52 73.1
Lj1A184T44 Lonicera japonica HOM05D003153 ORTHO05D003549 1.8e-17 93.2 52 78.8
Phvul.007G092100 Phaseolus vulgaris HOM05D003153 ORTHO05D003549 1.8e-17 93.2 52 73.1
Sp4g18080 Schrenkiella parvula HOM05D003153 ORTHO05D003549 1.8e-17 93.2 52 75.0
AL5G32930 Arabidopsis lyrata HOM05D003153 ORTHO05D003549 2.4e-17 92.8 52 73.1
AT3G52300 Arabidopsis thaliana HOM05D003153 ORTHO05D003549 2.4e-17 92.8 52 73.1
Carub.0004s1758 Capsella rubella HOM05D003153 ORTHO05D003549 2.4e-17 92.8 52 73.1
Gohir.D11G308400 Gossypium hirsutum HOM05D003153 ORTHO05D003549 2.4e-17 92.8 52 80.8
Lj5g0026554 Lotus japonicus HOM05D003153 ORTHO05D003549 2.4e-17 92.8 52 73.1
Hund08388 Selenicereus undatus HOM05D003153 ORTHO05D003549 2.4e-17 92.8 52 73.1
SGA_v2.0_scaffold2G00924 Striga asiatica HOM05D003153 ORTHO05D003549 2.4e-17 92.8 52 73.1
Potri.008G043800 Populus trichocarpa HOM05D003153 ORTHO05D003549 3.1e-17 92.4 52 73.1
VMungo0720G0580 Vigna mungo HOM05D003153 ORTHO05D003549 3.1e-17 92.4 52 73.1
ATR1158G031 Amborella trichopoda HOM05D003153 ORTHO05D003549 4.1e-17 92.0 52 76.9
ECA248G0726 Erigeron canadensis HOM05D003153 ORTHO05D003549 4.1e-17 92.0 52 75.0
Sabra08G0030300 Salix brachista HOM05D003153 ORTHO05D003549 4.1e-17 92.0 51 74.5
Ah.01g002740 Amaranthus hybridus HOM05D003153 ORTHO05D003549 5.4e-17 91.7 52 69.2
BraA04t16407Z Brassica rapa HOM05D003153 ORTHO05D003549 7.0e-17 91.3 52 73.1
Potri.010G217800 Populus trichocarpa HOM05D003153 ORTHO05D003549 9.2e-17 90.9 52 75.0
Oeu036290.2 Olea europaea HOM05D003153 ORTHO05D003549 2.7e-16 89.4 52 69.2
FAN01G2885 Fragaria x ananassa HOM05D003153 ORTHO05D003549 4.5e-16 88.6 64 65.6
Ciclev10029900m.g Citrus clementina HOM05D003153 ORTHO05D003549 5.9e-16 88.2 55 67.3
FAN10G0601 Fragaria x ananassa HOM05D003153 ORTHO05D003549 5.9e-16 88.2 65 64.6
unitig_0.g1036 Utricularia gibba HOM05D003153 ORTHO05D003549 1.3e-15 87.0 60 63.3
Sopen06g001020 Solanum pennellii HOM05D003153 ORTHO05D003549 7.3e-14 81.3 77 55.8
PSO063G2342 Papaver somniferum HOM05D003153 ORTHO05D003549 9.5e-14 80.9 52 65.4
Aqoxy461s001 Aquilegia oxysepala HOM05D003153 ORTHO05D003549 1.0e-12 77.4 52 65.4
Ca_10590_v3 Cicer arietinum L. HOM05D003153 ORTHO05D003549 2.3e-12 76.3 93 43.0
CDE12G0268 Ceratophyllum demersum HOM05D003153 ORTHO05D003549 8.9e-12 74.3 50 70.0
Solyc06g005020.3 Solanum lycopersicum HOM05D003153 ORTHO05D003549 8.9e-12 74.3 75 53.3
arahy.Tifrunner.gnm1.ann1.8WS310 Arachis hypogaea HOM05D003153 ORTHO05D003549 2.0e-11 73.2 95 42.1
Rhsim13G0092300 Rhododendron simsii HOM05D003153 ORTHO05D003549 4.4e-11 72.0 106 39.6
Ah.01g014920 Amaranthus hybridus HOM05D003153 ORTHO05D003549 9.8e-11 70.9 52 59.6
Gohir.D10G083766 Gossypium hirsutum HOM05D003153 ORTHO05D003549 9.8e-11 70.9 81 49.4
Gorai.003G100000 Gossypium raimondii HOM05D003153 ORTHO05D003549 4.6e-08 62.0 68 45.6
arahy.Tifrunner.gnm1.ann1.SR33X7 Arachis hypogaea HOM05D003153 ORTHO05D003549 5.9e-08 61.6 45 57.8
Cpa.g.sc60.52 Carica papaya HOM05D003153 ORTHO05D003549 1.0e-07 60.8 27 92.6


User provided reference genes

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