Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib128G1437 Durio zibethinus HOM05D007360 ORTHO05D008235 2.8e-219 765.0 397 100.0
Thecc.05G055700 Theobroma cacao HOM05D007360 ORTHO05D008235 4.3e-175 618.2 406 84.0
COL.COLO4_27062 Corchorus olitorius HOM05D007360 ORTHO05D008235 1.6e-161 573.2 407 77.9
Duzib093G0075 Durio zibethinus HOM05D007360 ORTHO05D008235 1.4e-157 560.1 366 83.3
Gorai.009G419600 Gossypium raimondii HOM05D007360 ORTHO05D008235 6.7e-144 514.6 404 73.5
Gohir.D04G115000 Gossypium hirsutum HOM05D007360 ORTHO05D008235 2.5e-143 512.7 404 73.5
Gohir.A04G075900 Gossypium hirsutum HOM05D007360 ORTHO05D008235 1.7e-142 510.0 404 73.0
Cpa.g.sc174.13 Carica papaya HOM05D007360 ORTHO05D008235 1.7e-94 350.5 434 51.2
Haze_20630 Corylus avellana HOM05D007360 ORTHO05D008235 3.6e-89 332.8 449 51.7
Cfa017520 Carpinus fangiana HOM05D007360 ORTHO05D008235 1.1e-88 331.3 444 50.5
QL07p045105 Quercus lobata HOM05D007360 ORTHO05D008235 1.3e-86 324.3 435 52.2
Atru.chr8.1896 Acer truncatum HOM05D007360 ORTHO05D008235 2.1e-84 317.0 417 52.3
CiPaw.09G179100 Carya illinoinensis HOM05D007360 ORTHO05D008235 5.6e-82 308.9 420 51.9
Potri.006G130600 Populus trichocarpa HOM05D007360 ORTHO05D008235 4.0e-80 302.8 425 49.4
TWI74G1131 Tripterygium wilfordii HOM05D007360 ORTHO05D008235 9.9e-79 298.1 427 49.4
Dinv35727 Davidia involucrata HOM05D007360 ORTHO05D008235 2.2e-78 297.0 455 45.1
Prupe.6G240300 Prunus persica HOM05D007360 ORTHO05D008235 6.4e-78 295.4 423 50.4
ClCG10G020460 Citrullus lanatus HOM05D007360 ORTHO05D008235 1.1e-74 284.6 455 45.7
PGR004G0580 Punica granatum HOM05D007360 ORTHO05D008235 2.5e-74 283.5 424 46.9
vmacro20051 Vaccinium macrocarpon HOM05D007360 ORTHO05D008235 5.6e-74 282.3 429 47.3
THA.LOC104816327 Tarenaya hassleriana HOM05D007360 ORTHO05D008235 1.5e-71 274.2 424 46.9
CsaV3_3G035660 Cucumis sativus L. HOM05D007360 ORTHO05D008235 1.3e-70 271.2 446 44.4
Manes.08G004115 Manihot esculenta HOM05D007360 ORTHO05D008235 2.2e-70 270.4 409 49.4
Ciclev10011834m.g Citrus clementina HOM05D007360 ORTHO05D008235 8.4e-70 268.5 417 45.3
MELO3C009325.2 Cucumis melo HOM05D007360 ORTHO05D008235 2.1e-68 263.8 406 46.1
Hma1.2p1_0111F.1_g053990 Hydrangea macrophylla HOM05D007360 ORTHO05D008235 3.5e-68 263.1 417 46.3
Actinidia19699 Actinidia chinensis HOM05D007360 ORTHO05D008235 6.6e-67 258.8 481 41.4
CANSAT80G2624 Cannabis sativa HOM05D007360 ORTHO05D008235 3.6e-65 253.1 427 44.5
TAR633G0942 Trochodendron aralioides HOM05D007360 ORTHO05D008235 4.8e-65 252.7 494 42.3
Manes.08G004132 Manihot esculenta HOM05D007360 ORTHO05D008235 3.4e-63 246.5 421 45.1
FvH4_6g15500 Fragaria vesca HOM05D007360 ORTHO05D008235 5.8e-63 245.7 425 44.2
Lsat_1_v5_gn_6_30100 Lactuca sativa HOM05D007360 ORTHO05D008235 3.8e-62 243.0 404 44.1
Manes.08G004103 Manihot esculenta HOM05D007360 ORTHO05D008235 4.9e-62 242.7 421 44.2
Oeu060091.1 Olea europaea HOM05D007360 ORTHO05D008235 6.4e-62 242.3 404 45.8
Nitab4.5_0006156g0020 Nicotiana tabacum HOM05D007360 ORTHO05D008235 2.4e-61 240.4 470 41.7
Nitab4.5_0000669g0130 Nicotiana tabacum HOM05D007360 ORTHO05D008235 7.9e-60 235.3 473 40.6
Peaxi162Scf00005g04017 Petunia axillaris HOM05D007360 ORTHO05D008235 1.0e-59 235.0 423 42.3
Manes.12G045236 Manihot esculenta HOM05D007360 ORTHO05D008235 3.0e-59 233.4 386 46.4
Sopen09g002350 Solanum pennellii HOM05D007360 ORTHO05D008235 6.6e-59 232.3 333 47.4
Manes.08G004904 Manihot esculenta HOM05D007360 ORTHO05D008235 5.6e-58 229.2 381 45.7
Phvul.007G164700 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 1.3e-57 228.0 417 40.5
Solyc09g007460.4 Solanum lycopersicum HOM05D007360 ORTHO05D008235 1.3e-57 228.0 353 45.3
AT3G09730 Arabidopsis thaliana HOM05D007360 ORTHO05D008235 2.1e-57 227.3 428 44.2
FAN14G4542 Fragaria x ananassa HOM05D007360 ORTHO05D008235 3.6e-57 226.5 453 40.6
BolC1t05436H Brassica oleracea HOM05D007360 ORTHO05D008235 4.8e-57 226.1 422 42.2
AL3G20950 Arabidopsis lyrata HOM05D007360 ORTHO05D008235 8.1e-57 225.3 414 44.0
Sc20g0005120 Simmondsia chinensis HOM05D007360 ORTHO05D008235 5.3e-56 222.6 427 41.9
Glyma.10G050400 Glycine max HOM05D007360 ORTHO05D008235 6.9e-56 222.2 417 42.0
PGSC0003DMG400001741 Solanum tuberosum HOM05D007360 ORTHO05D008235 1.2e-55 221.5 484 38.4
Manes.08G004112 Manihot esculenta HOM05D007360 ORTHO05D008235 2.0e-55 220.7 399 44.4
RcHm_v2.0_Chr3g0469001 Rosa chinensis HOM05D007360 ORTHO05D008235 2.6e-55 220.3 392 44.4
Manes.05G197400 Manihot esculenta HOM05D007360 ORTHO05D008235 3.4e-55 219.9 391 45.3
Nn2g13027 Nelumbo nucifera HOM05D007360 ORTHO05D008235 9.9e-55 218.4 489 39.9
Thhalv10020860m.g Eutrema salsugineum HOM05D007360 ORTHO05D008235 1.3e-54 218.0 423 43.5
EL10Ac7g16510 Beta vulgaris HOM05D007360 ORTHO05D008235 2.2e-54 217.2 412 41.5
Migut.L01667 Erythranthe guttata HOM05D007360 ORTHO05D008235 2.2e-54 217.2 417 42.9
Glyma.13G137900 Glycine max HOM05D007360 ORTHO05D008235 2.9e-54 216.9 425 41.6
Sp3g08070 Schrenkiella parvula HOM05D007360 ORTHO05D008235 2.9e-54 216.9 424 42.0
Carub.0003s0882 Capsella rubella HOM05D007360 ORTHO05D008235 8.4e-54 215.3 427 42.6
Manes.08G014114 Manihot esculenta HOM05D007360 ORTHO05D008235 2.4e-53 213.8 395 44.1
FAN02G3036 Fragaria x ananassa HOM05D007360 ORTHO05D008235 2.1e-52 210.7 435 40.0
ECA233G0563 Erigeron canadensis HOM05D007360 ORTHO05D008235 2.7e-52 210.3 387 41.6
Manes.08G004125 Manihot esculenta HOM05D007360 ORTHO05D008235 4.6e-52 209.5 397 43.8
FAN05G5130 Fragaria x ananassa HOM05D007360 ORTHO05D008235 1.3e-51 208.0 427 40.3
SGA_v2.0_scaffold126G33907 Striga asiatica HOM05D007360 ORTHO05D008235 5.1e-51 206.1 436 38.5
Sabra06G0102600 Salix brachista HOM05D007360 ORTHO05D008235 1.1e-50 204.9 422 41.2
Manes.08G004130 Manihot esculenta HOM05D007360 ORTHO05D008235 1.9e-50 204.1 369 44.2
Cc06_g03670 Coffea canephora HOM05D007360 ORTHO05D008235 2.5e-50 203.8 461 39.0
Lalb_Chr02g0156301 Lupinus albus HOM05D007360 ORTHO05D008235 3.3e-50 203.4 424 39.9
Manes.08G004107 Manihot esculenta HOM05D007360 ORTHO05D008235 1.6e-49 201.1 417 41.5
CARHR084150 Cardamine hirsuta HOM05D007360 ORTHO05D008235 2.1e-49 200.7 427 41.7
BraA01t04285Z Brassica rapa HOM05D007360 ORTHO05D008235 2.8e-49 200.3 423 40.7
A01p42170 Brassica napus HOM05D007360 ORTHO05D008235 3.7e-49 199.9 418 42.1
Manes.08G004118 Manihot esculenta HOM05D007360 ORTHO05D008235 6.2e-49 199.1 422 41.5
FAN09G4144 Fragaria x ananassa HOM05D007360 ORTHO05D008235 1.4e-48 198.0 257 52.1
Sopen00g009140 Solanum pennellii HOM05D007360 ORTHO05D008235 7.6e-47 192.2 258 49.6
Lalb_Chr21g0314721 Lupinus albus HOM05D007360 ORTHO05D008235 1.4e-45 188.0 426 38.0
Sed0020725 Sechium edule HOM05D007360 ORTHO05D008235 1.9e-42 177.6 297 43.4
Ah.08g211880 Amaranthus hybridus HOM05D007360 ORTHO05D008235 4.3e-42 176.4 278 47.5
Lj1g0018826 Lotus japonicus HOM05D007360 ORTHO05D008235 1.1e-40 171.8 230 49.1
Manes.08G004119 Manihot esculenta HOM05D007360 ORTHO05D008235 9.0e-40 168.7 280 46.4
MD04G1105400 Malus domestica HOM05D007360 ORTHO05D008235 1.3e-38 164.9 227 47.1
VMungo0720G0507 Vigna mungo HOM05D007360 ORTHO05D008235 1.3e-38 164.9 253 46.2
DCAR_020845 Daucus carota HOM05D007360 ORTHO05D008235 5.5e-37 159.5 387 38.5
CSS0042376 Camellia sinensis var. sinensis HOM05D007360 ORTHO05D008235 9.3e-37 158.7 516 33.5
MSTRG.10303 Avicennia marina HOM05D007360 ORTHO05D008235 1.0e-35 155.2 297 40.4
Manes.05G196900 Manihot esculenta HOM05D007360 ORTHO05D008235 1.3e-33 148.3 236 45.8
Aqoxy4G03227 Aquilegia oxysepala HOM05D007360 ORTHO05D008235 2.2e-33 147.5 288 42.4
Lj5g0015354 Lotus japonicus HOM05D007360 ORTHO05D008235 2.2e-33 147.5 347 36.9
Aa31LG3G2160 Aethionema arabicum HOM05D007360 ORTHO05D008235 2.8e-33 147.1 342 37.7
GSVIVG01025644001 Vitis vinifera HOM05D004499 ORTHO05D004928 4.3e-26 123.2 84 77.4
HanXRQChr02g0051971 Helianthus annuus HOM05D007360 ORTHO05D008235 1.8e-24 117.9 279 36.6
Phvul.001G175350 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 9.7e-18 95.5 227 34.8
MD12G1122600 Malus domestica HOM05D007360 ORTHO05D008235 4.8e-17 93.2 119 49.6
Manes.09G079705 Manihot esculenta HOM05D007360 ORTHO05D008235 4.0e-11 73.6 53 73.6
Oeu018558.1 Olea europaea HOM05D007360 ORTHO05D008235 6.7e-11 72.8 108 44.4
Oeu063812.1 Olea europaea HOM05D007360 ORTHO05D008235 3.3e-10 70.5 108 45.4
HanXRQChr02g0051981 Helianthus annuus HOM05D007360 ORTHO05D008235 9.7e-10 68.9 127 40.9
Hund20189 Selenicereus undatus HOM05D007360 ORTHO05D008235 3.7e-09 67.0 73 46.6
TAR625G1494 Trochodendron aralioides HOM05D005497 ORTHO05D006733 1.4e-08 65.1 237 29.5
Actinidia10518 Actinidia chinensis HOM05D005497 ORTHO05D006733 4.1e-08 63.5 304 27.3
Hma1.2p1_1284F.1_g272900 Hydrangea macrophylla HOM05D005497 ORTHO05D006733 2.0e-07 61.2 234 28.2
MBI15_g07765_MAGBIO Magnolia biondii HOM05D005497 ORTHO05D006733 2.0e-07 61.2 266 26.7
Actinidia22292 Actinidia chinensis HOM05D005497 ORTHO05D006733 5.9e-07 59.7 317 24.6
MD04G1102800 Malus domestica HOM05D007360 ORTHO05D008235 7.7e-07 59.3 154 35.7
Oeu030218.3 Olea europaea HOM05D005497 ORTHO05D006733 1.0e-06 58.9 309 27.2
AagrBONN_evm.TU.Sc2ySwM_228.3362 Anthoceros agrestis HOM05D018912 ORTHO05D021275 1.3e-06 58.5 314 27.1
Nn2g12349 Nelumbo nucifera HOM05D005497 ORTHO05D006733 2.9e-06 57.4 240 27.5
Rhsim02G0213400 Rhododendron simsii HOM05D005497 ORTHO05D006733 2.9e-06 57.4 245 26.5
Thhalv10025612m.g Eutrema salsugineum HOM05D005497 ORTHO05D006733 5.0e-06 56.6 229 27.9
Actinidia23103 Actinidia chinensis HOM05D005497 ORTHO05D006733 6.5e-06 56.2 322 25.8
Ciclev10008815m.g Citrus clementina HOM05D005497 ORTHO05D006733 6.5e-06 56.2 247 26.3


User provided reference genes

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