Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib128G0804 Durio zibethinus HOM05D005838 ORTHO05D007177 4.9e-108 394.4 191 100.0
Duzib114G0236 Durio zibethinus HOM05D005838 ORTHO05D007177 6.6e-97 357.5 191 91.1
Thecc.10G041400 Theobroma cacao HOM05D005838 ORTHO05D007177 6.2e-95 350.9 191 89.5
Gohir.A10G219500 Gossypium hirsutum HOM05D005838 ORTHO05D007177 1.3e-92 343.2 191 88.0
Gohir.D10G229000 Gossypium hirsutum HOM05D005838 ORTHO05D007177 1.3e-92 343.2 191 88.0
Gorai.011G261500 Gossypium raimondii HOM05D005838 ORTHO05D007177 1.3e-92 343.2 191 88.0
COL.COLO4_15048 Corchorus olitorius HOM05D005838 ORTHO05D007177 2.2e-92 342.4 188 87.2
THA.LOC104827330 Tarenaya hassleriana HOM05D005838 ORTHO05D007177 4.0e-78 295.0 190 73.7
Atru.chr12.445 Acer truncatum HOM05D005838 ORTHO05D007177 1.3e-76 290.0 194 72.2
Ciclev10033314m.g Citrus clementina HOM05D005838 ORTHO05D007177 1.9e-75 286.2 170 77.6
QL08p059697 Quercus lobata HOM05D005838 ORTHO05D007177 3.2e-75 285.4 191 71.7
VMungo1383G0749 Vigna mungo HOM05D005838 ORTHO05D007177 5.4e-75 284.6 192 71.4
Aa31sc79G70 Aethionema arabicum HOM05D005838 ORTHO05D007177 7.1e-75 284.3 190 70.5
CiPaw.01G287700 Carya illinoinensis HOM05D005838 ORTHO05D007177 3.5e-74 282.0 192 71.9
Sed0000199 Sechium edule HOM05D005838 ORTHO05D007177 3.5e-74 282.0 191 70.2
MELO3C024840.2 Cucumis melo HOM05D005838 ORTHO05D007177 6.0e-74 281.2 191 70.7
Sp3g10660 Schrenkiella parvula HOM05D005838 ORTHO05D007177 1.3e-73 280.0 190 69.5
CsaV3_4G009680 Cucumis sativus L. HOM05D005838 ORTHO05D007177 1.7e-73 279.6 192 70.3
AL3G24160 Arabidopsis lyrata HOM05D005838 ORTHO05D007177 3.0e-73 278.9 190 70.0
Carub.0003s1186 Capsella rubella HOM05D005838 ORTHO05D007177 5.1e-73 278.1 190 69.5
AT3G12530 Arabidopsis thaliana HOM05D005838 ORTHO05D007177 8.7e-73 277.3 190 69.5
CARHR087030 Cardamine hirsuta HOM05D005838 ORTHO05D007177 8.7e-73 277.3 190 68.4
Thhalv10021517m.g Eutrema salsugineum HOM05D005838 ORTHO05D007177 1.5e-72 276.6 190 68.4
Nn1g07214 Nelumbo nucifera HOM05D005838 ORTHO05D007177 1.9e-72 276.2 191 72.3
Haze_17070 Corylus avellana HOM05D005838 ORTHO05D007177 2.5e-72 275.8 186 71.0
HPP92_027375 Vanilla planifolia HOM05D005838 ORTHO05D007177 3.3e-72 275.4 190 70.5
Manes.07G116600 Manihot esculenta HOM05D005838 ORTHO05D007177 4.3e-72 275.0 189 72.5
TAR623G0537 Trochodendron aralioides HOM05D005838 ORTHO05D007177 4.3e-72 275.0 190 71.6
MD01G1134500 Malus domestica HOM05D005838 ORTHO05D007177 5.6e-72 274.6 192 67.2
Glyma.16G058300 Glycine max HOM05D005838 ORTHO05D007177 9.6e-72 273.9 192 69.8
BolC3t16845H Brassica oleracea HOM05D005838 ORTHO05D007177 3.6e-71 271.9 190 67.4
CANSAT78G0186 Cannabis sativa HOM05D005838 ORTHO05D007177 3.6e-71 271.9 196 68.4
TAR369G1142 Trochodendron aralioides HOM05D005838 ORTHO05D007177 3.6e-71 271.9 168 78.6
arahy.Tifrunner.gnm1.ann1.5TUK4V Arachis hypogaea HOM05D005838 ORTHO05D007177 4.8e-71 271.6 192 69.8
Phvul.001G114700 Phaseolus vulgaris HOM05D005838 ORTHO05D007177 4.8e-71 271.6 192 68.8
BraA03t12920Z Brassica rapa HOM05D005838 ORTHO05D007177 6.2e-71 271.2 190 67.4
FvH4_7g22520 Fragaria vesca HOM05D005838 ORTHO05D007177 8.1e-71 270.8 192 68.2
FAN06G0860 Fragaria x ananassa HOM05D005838 ORTHO05D007177 8.1e-71 270.8 192 68.2
FAN06G0984 Fragaria x ananassa HOM05D005838 ORTHO05D007177 8.1e-71 270.8 192 68.2
Sc11g0007930 Simmondsia chinensis HOM05D005838 ORTHO05D007177 8.1e-71 270.8 191 69.6
FAN10G2643 Fragaria x ananassa HOM05D005838 ORTHO05D007177 1.1e-70 270.4 192 68.2
Sabra10G0157100 Salix brachista HOM05D005838 ORTHO05D007177 1.1e-70 270.4 189 70.4
TPR.G2804 Trifolium pratense HOM05D005838 ORTHO05D007177 1.4e-70 270.0 192 69.8
RcHm_v2.0_Chr1g0367201 Rosa chinensis HOM05D005838 ORTHO05D007177 2.4e-70 269.2 192 67.7
Ca_24072_v3 Cicer arietinum L. HOM05D005838 ORTHO05D007177 5.3e-70 268.1 192 69.8
Dinv03043 Davidia involucrata HOM05D005838 ORTHO05D007177 5.3e-70 268.1 190 68.9
Lalb_Chr22g0360471 Lupinus albus HOM05D005838 ORTHO05D007177 6.9e-70 267.7 185 70.3
PSO541G0023 Papaver somniferum HOM05D005838 ORTHO05D007177 6.9e-70 267.7 190 70.0
Hund16085 Selenicereus undatus HOM05D005838 ORTHO05D007177 6.9e-70 267.7 191 70.2
Dinv26018 Davidia involucrata HOM05D005838 ORTHO05D007177 1.5e-69 266.5 190 68.9
PSO339G6019 Papaver somniferum HOM05D005838 ORTHO05D007177 1.5e-69 266.5 190 68.9
C03p45720 Brassica napus HOM05D005838 ORTHO05D007177 2.0e-69 266.2 185 67.6
MD07G1199100 Malus domestica HOM05D005838 ORTHO05D007177 2.6e-69 265.8 192 65.1
Potri.010G203600 Populus trichocarpa HOM05D005838 ORTHO05D007177 2.6e-69 265.8 189 68.3
arahy.Tifrunner.gnm1.ann1.9R8UEA Arachis hypogaea HOM05D005838 ORTHO05D007177 3.4e-69 265.4 186 69.4
Prupe.2G235900 Prunus persica HOM05D005838 ORTHO05D007177 3.4e-69 265.4 192 65.1
arahy.Tifrunner.gnm1.ann1.YA5U61 Arachis hypogaea HOM05D005838 ORTHO05D007177 4.5e-69 265.0 186 69.4
A03p37670 Brassica napus HOM05D005838 ORTHO05D007177 4.5e-69 265.0 185 67.6
GSVIVG01024370001 Vitis vinifera HOM05D005838 ORTHO05D007177 7.6e-69 264.2 190 68.4
Os01g0248600 Oryza sativa ssp. japonica HOM05D005838 ORTHO05D007177 9.9e-69 263.8 191 67.0
CDE04G0192 Ceratophyllum demersum HOM05D005838 ORTHO05D007177 1.3e-68 263.5 190 68.4
arahy.Tifrunner.gnm1.ann1.3RZV8E Arachis hypogaea HOM05D005838 ORTHO05D007177 1.7e-68 263.1 186 68.8
CSS0040522 Camellia sinensis var. sinensis HOM05D005838 ORTHO05D007177 1.7e-68 263.1 192 67.7
Aqoxy6G01179 Aquilegia oxysepala HOM05D005838 ORTHO05D007177 2.9e-68 262.3 191 68.1
AUR62012091 Chenopodium quinoa HOM05D005838 ORTHO05D007177 2.9e-68 262.3 186 69.4
FAN01G2632 Fragaria x ananassa HOM05D005838 ORTHO05D007177 2.9e-68 262.3 188 67.6
AUR62039375 Chenopodium quinoa HOM05D005838 ORTHO05D007177 3.8e-68 261.9 186 68.8
Eucgr.J00011 Eucalyptus grandis HOM05D005838 ORTHO05D007177 3.8e-68 261.9 192 70.3
FAN01G2297 Fragaria x ananassa HOM05D005838 ORTHO05D007177 3.8e-68 261.9 188 67.6
TWI34G1817 Tripterygium wilfordii HOM05D005838 ORTHO05D007177 3.8e-68 261.9 189 67.7
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 4.9e-68 261.5 186 69.4
FAN03G0424 Fragaria x ananassa HOM05D005838 ORTHO05D007177 6.4e-68 261.2 187 67.9
Hma1.2p1_0405F.1_g145680 Hydrangea macrophylla HOM05D005838 ORTHO05D007177 1.1e-67 260.4 191 69.1
Zm00001eb331580 Zea mays HOM05D005838 ORTHO05D007177 2.4e-67 259.2 191 66.5
BcaB04g21071 Brassica carinata HOM05D005838 ORTHO05D007177 5.4e-67 258.1 194 65.5
Medtr7g029455 Medicago truncatula HOM05D005838 ORTHO05D007177 2.1e-66 256.1 198 65.2
Lj8A84T88 Lonicera japonica HOM05D005838 ORTHO05D007177 2.7e-66 255.8 186 66.7
Aqoxy3G02271 Aquilegia oxysepala HOM05D005838 ORTHO05D007177 4.6e-66 255.0 191 66.5
HanXRQChr14g0458031 Helianthus annuus HOM05D005838 ORTHO05D007177 7.9e-66 254.2 191 65.4
Cc02_g07820 Coffea canephora HOM05D005838 ORTHO05D007177 1.0e-65 253.8 191 66.0
Lsat_1_v5_gn_1_78580 Lactuca sativa HOM05D005838 ORTHO05D007177 2.3e-65 252.7 192 66.7
HanXRQChr17g0562051 Helianthus annuus HOM05D005838 ORTHO05D007177 6.7e-65 251.1 191 64.4
EL10Ac2g04744 Beta vulgaris HOM05D005838 ORTHO05D007177 1.1e-64 250.4 208 61.1
ATR0579G085 Amborella trichopoda HOM05D005838 ORTHO05D007177 1.5e-64 250.0 192 65.1
ECA238G0467 Erigeron canadensis HOM05D005838 ORTHO05D007177 5.6e-64 248.1 192 63.0
Lj1g0024127 Lotus japonicus HOM05D005838 ORTHO05D007177 5.6e-64 248.1 187 63.6
Oeu064376.1 Olea europaea HOM05D005838 ORTHO05D007177 5.6e-64 248.1 191 64.4
DCAR_011703 Daucus carota HOM05D005838 ORTHO05D007177 1.3e-63 246.9 181 68.0
vmacro10230 Vaccinium macrocarpon HOM05D005838 ORTHO05D007177 1.3e-63 246.9 164 72.6
Rhsim09G0166200 Rhododendron simsii HOM05D005838 ORTHO05D007177 2.1e-63 246.1 164 71.3
SGA_v2.0_scaffold2G01002 Striga asiatica HOM05D005838 ORTHO05D007177 6.2e-63 244.6 191 63.9
ECA236G5038 Erigeron canadensis HOM05D005838 ORTHO05D007177 9.0e-62 240.7 187 63.1
MSTRG.287 Avicennia marina HOM05D005838 ORTHO05D007177 2.0e-61 239.6 191 62.3
Solyc05g054430.4 Solanum lycopersicum HOM05D005838 ORTHO05D007177 3.4e-61 238.8 191 62.3
Sopen05g032920 Solanum pennellii HOM05D005838 ORTHO05D007177 3.4e-61 238.8 191 62.3
PGSC0003DMG402023533 Solanum tuberosum HOM05D005838 ORTHO05D007177 3.4e-61 238.8 191 62.3
CAN.G1013.29 Capsicum annuum HOM05D005838 ORTHO05D007177 5.8e-61 238.0 170 68.8
Migut.M01657 Erythranthe guttata HOM05D005838 ORTHO05D007177 8.4e-60 234.2 193 62.7
MBI14_g35405_MAGBIO Magnolia biondii HOM05D005838 ORTHO05D007177 1.9e-59 233.0 190 63.7
Peaxi162Scf00886g00023 Petunia axillaris HOM05D005838 ORTHO05D007177 1.6e-58 229.9 183 64.5
SEGI_05999 Sequoiadendron giganteum HOM05D005838 ORTHO05D007177 3.5e-58 228.8 163 65.0
Mapoly0001s0197 Marchantia polymorpha HOM05D005838 ORTHO05D007177 3.0e-57 225.7 190 56.8
PGR044G1343 Punica granatum HOM05D005838 ORTHO05D007177 1.1e-56 223.8 135 80.7
Nitab4.5_0008565g0020 Nicotiana tabacum HOM05D005838 ORTHO05D007177 7.4e-56 221.1 194 59.3
SMO358G0240 Selaginella moellendorffii HOM05D005838 ORTHO05D007177 1.3e-55 220.3 161 65.8
Nitab4.5_0025932g0010 Nicotiana tabacum HOM05D005838 ORTHO05D007177 2.2e-52 209.5 169 62.1
Actinidia13881 Actinidia chinensis HOM05D005838 ORTHO05D007177 4.9e-52 208.4 136 73.5
Pp3c24_19790 Physcomitrium patens HOM05D005838 ORTHO05D007177 2.5e-51 206.1 192 54.2
CBR_g83733 Chara braunii HOM05D005838 ORTHO05D007177 7.9e-50 201.1 162 56.2
Phvul.004G101800 Phaseolus vulgaris HOM05D005838 ORTHO05D007177 3.0e-49 199.1 122 74.6
Potri.008G056200 Populus trichocarpa HOM05D005838 ORTHO05D007177 1.1e-43 180.6 189 53.4
AagrBONN_evm.TU.Sc2ySwM_117.2288 Anthoceros agrestis HOM05D005838 ORTHO05D007177 4.3e-40 168.7 190 47.4
ECA240G3935 Erigeron canadensis HOM05D005838 ORTHO05D007177 3.2e-35 152.5 93 69.9
SalBow6G6757 Salvia bowleyana HOM05D005838 ORTHO05D007177 6.9e-30 134.8 133 54.9
PRCOL_00001833 Prasinoderma coloniale HOM05D005838 ORTHO05D007177 1.4e-27 127.1 182 36.3
AagrBONN_evm.TU.Sc2ySwM_368.230 Anthoceros agrestis HOM05D005838 ORTHO05D007177 1.0e-25 120.9 114 45.6
MCO01G144 Micromonas commoda HOM05D005838 ORTHO05D007177 1.4e-25 120.6 160 38.1
Cre01.g029100 Chlamydomonas reinhardtii HOM05D005838 ORTHO05D007177 1.7e-23 113.6 154 41.6
ClCG10G009550 Citrullus lanatus HOM05D005838 ORTHO05D007177 6.3e-23 111.7 60 78.3
Cpa.g.sc1.409 Carica papaya HOM05D005838 ORTHO05D007177 8.2e-23 111.3 87 66.7
Ah.04g162270 Amaranthus hybridus HOM05D005838 ORTHO05D007177 3.1e-22 109.4 60 78.3
BcaC09g48252 Brassica carinata HOM05D000758 ORTHO05D001216 8.0e-18 94.7 185 35.7
BolC5t34206H Brassica oleracea HOM05D005838 ORTHO05D007177 2.3e-17 93.2 82 57.3
Oeu048244.1 Olea europaea HOM05D005838 ORTHO05D007177 5.2e-17 92.0 50 82.0
unitig_27.g25062 Utricularia gibba HOM05D005838 ORTHO05D007177 8.8e-17 91.3 97 49.5
CSS0016900 Camellia sinensis var. sinensis HOM05D005838 ORTHO05D007177 4.4e-16 89.0 72 59.7
C05p55400 Brassica napus HOM05D005838 ORTHO05D007177 7.5e-16 88.2 77 55.8
C01p52640 Brassica napus HOM05D005838 ORTHO05D007177 2.4e-14 83.2 156 37.8
BolC1t05204H Brassica oleracea HOM05D005838 ORTHO05D007177 2.4e-14 83.2 156 37.8
BNapus_Darmor_BZH_scaffold_149p00070 Brassica napus HOM05D005838 ORTHO05D041122 2.5e-11 73.2 151 34.4
Psat7g263960 Pisum sativum HOM05D005838 ORTHO05D007177 8.8e-09 64.7 49 63.3
BraA05t22495Z Brassica rapa HOM05D005838 ORTHO05D007177 1.3e-07 60.8 40 67.5


User provided reference genes

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