Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib128G0429 Durio zibethinus HOM05D005571 ORTHO05D006919 1.1e-50 203.0 103 100.0
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 2.5e-34 148.7 102 76.5
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 3.6e-33 144.8 102 75.5
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 8.1e-33 143.7 102 74.5
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 1.2e-31 139.8 102 73.5
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 8.3e-30 133.7 102 69.6
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 8.3e-30 133.7 102 69.6
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 8.3e-30 133.7 102 69.6
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 7.1e-29 130.6 102 67.6
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 2.3e-27 125.6 105 65.7
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 2.3e-27 125.6 105 65.7
Gohir.A02G084300 Gossypium hirsutum HOM05D005571 ORTHO05D006919 3.3e-26 121.7 105 64.8
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 5.6e-26 120.9 102 63.7
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 2.1e-25 119.0 102 61.8
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 5.2e-24 114.4 104 63.5
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 2.0e-23 112.5 102 59.8
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 2.6e-23 112.1 103 63.1
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 9.9e-23 110.2 102 56.9
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 1.3e-22 109.8 103 62.1
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 6.4e-22 107.5 102 54.9
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 2.4e-21 105.5 103 59.2
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 9.2e-21 103.6 98 57.1
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 2.7e-20 102.1 102 55.9
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 3.5e-20 101.7 102 57.8
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 4.6e-20 101.3 102 53.9
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 1.0e-19 100.1 101 57.4
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 1.7e-19 99.4 98 58.2
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 1.7e-19 99.4 103 59.2
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 2.3e-19 99.0 102 54.9
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 3.9e-19 98.2 102 53.9
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 3.9e-19 98.2 103 55.3
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 5.1e-19 97.8 102 49.0
Sabra11G0114300 Salix brachista HOM05D005571 ORTHO05D006919 6.6e-19 97.4 103 56.3
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 1.5e-18 96.3 103 56.3
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 1.9e-18 95.9 79 65.8
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 2.5e-18 95.5 103 57.3
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 3.3e-18 95.1 102 52.9
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 3.3e-18 95.1 102 52.0
Cpa.g.c36471 Carica papaya HOM05D005571 ORTHO05D006919 9.6e-18 93.6 87 58.6
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 2.1e-17 92.4 95 56.8
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 4.8e-17 91.3 102 50.0
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 4.8e-17 91.3 104 50.0
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 6.2e-17 90.9 102 52.9
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 2.4e-16 89.0 91 58.2
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 3.1e-16 88.6 101 51.5
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 4.0e-16 88.2 100 52.0
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 5.3e-16 87.8 91 53.8
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 9.0e-16 87.0 103 50.5
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 9.0e-16 87.0 109 48.6
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 1.2e-15 86.7 103 47.6
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 2.6e-15 85.5 100 50.0
Dinv31944 Davidia involucrata HOM05D005571 ORTHO05D006919 3.4e-15 85.1 88 52.3
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 5.8e-15 84.3 98 51.0
Sabra11G0115000 Salix brachista HOM05D005571 ORTHO05D006919 7.6e-15 84.0 89 53.9
Sabra11G0115600 Salix brachista HOM05D005571 ORTHO05D006919 7.6e-15 84.0 89 53.9
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 9.9e-15 83.6 104 48.1
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 9.9e-15 83.6 100 47.0
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 9.9e-15 83.6 100 47.0
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 6.4e-14 80.9 87 54.0
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 6.4e-14 80.9 87 54.0
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 8.4e-14 80.5 103 46.6
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 8.4e-14 80.5 77 55.8
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 1.4e-13 79.7 79 51.9
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 3.2e-13 78.6 103 49.5
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 3.2e-13 78.6 104 46.2
Prupe.1G354300 Prunus persica HOM05D005571 ORTHO05D006919 5.4e-13 77.8 127 44.1
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 7.1e-13 77.4 87 51.7
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 2.1e-12 75.9 100 46.0
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 7.8e-12 73.9 86 52.3
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 7.8e-12 73.9 80 55.0
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 1.0e-11 73.6 95 48.4
Sc02g0009100 Simmondsia chinensis HOM05D005571 ORTHO05D006919 1.3e-11 73.2 87 48.3
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 2.3e-11 72.4 81 56.8
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 2.3e-11 72.4 81 56.8
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 3.9e-11 71.6 95 51.6
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 6.6e-11 70.9 90 44.4
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 8.7e-11 70.5 82 56.1
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 1.1e-10 70.1 100 42.0
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 1.5e-10 69.7 96 46.9
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 1.9e-10 69.3 95 49.5
Solyc04g082380.4 Solanum lycopersicum HOM05D005571 ORTHO05D006919 5.6e-10 67.8 96 45.8
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 5.6e-10 67.8 96 45.8
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 1.3e-09 66.6 101 38.6
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 1.6e-09 66.2 101 43.6
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 2.1e-09 65.9 89 46.1
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 3.6e-09 65.1 108 49.1
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 1.1e-08 63.5 100 47.0
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 1.1e-08 63.5 87 48.3
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 1.4e-08 63.2 84 51.2
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 1.4e-08 63.2 108 41.7
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 2.4e-08 62.4 99 47.5
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 5.3e-08 61.2 102 43.1
HanXRQChr06g0183961 Helianthus annuus HOM05D005571 ORTHO05D006919 5.3e-08 61.2 86 44.2
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 9.0e-08 60.5 91 35.2
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 2.0e-07 59.3 74 50.0
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 2.0e-07 59.3 81 43.2
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 2.6e-07 58.9 91 34.1
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 3.4e-07 58.5 96 42.7
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 5.8e-07 57.8 78 44.9
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 5.8e-07 57.8 98 41.8
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 5.8e-07 57.8 98 41.8
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 5.8e-07 57.8 98 41.8
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 5.8e-07 57.8 102 42.2
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 5.8e-07 57.8 95 42.1
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 1.3e-06 56.6 98 40.8
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 1.7e-06 56.2 108 41.7
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 2.2e-06 55.8 102 40.2
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 2.9e-06 55.5 101 45.5
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 3.8e-06 55.1 83 45.8
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 6.4e-06 54.3 74 47.3
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 8.4e-06 53.9 79 46.8


User provided reference genes

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