Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib128G0300 Durio zibethinus HOM05D007667 ORTHO05D008033 1.9e-136 489.2 249 100.0
Thecc.05G130400 Theobroma cacao HOM05D007667 ORTHO05D008033 3.0e-81 305.8 263 68.4
COL.COLO4_22773 Corchorus olitorius HOM05D007667 ORTHO05D008033 6.9e-62 241.5 261 55.2
QL07p015392 Quercus lobata HOM05D007667 ORTHO05D008033 8.4e-44 181.4 336 38.4
Potri.016G024600 Populus trichocarpa HOM05D007667 ORTHO05D008033 4.2e-43 179.1 326 38.7
CiPaw.09G161700 Carya illinoinensis HOM05D007667 ORTHO05D008033 4.6e-42 175.6 354 38.1
Sabra16G0030500 Salix brachista HOM05D007667 ORTHO05D008033 4.6e-42 175.6 332 39.2
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea HOM05D007667 ORTHO05D008033 1.3e-41 174.1 355 36.6
Cfa019904 Carpinus fangiana HOM05D007667 ORTHO05D008033 3.0e-41 172.9 326 40.8
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea HOM05D007667 ORTHO05D008033 3.9e-41 172.6 355 36.3
Lalb_Chr14g0365211 Lupinus albus HOM05D007667 ORTHO05D008033 6.7e-41 171.8 349 40.1
MD12G1111200 Malus domestica HOM05D007667 ORTHO05D008033 8.7e-41 171.4 365 35.9
VMungo1383G2866 Vigna mungo HOM05D007667 ORTHO05D008033 5.7e-40 168.7 347 38.3
Medtr7g087970 Medicago truncatula HOM05D007667 ORTHO05D008033 7.4e-40 168.3 346 39.6
GSVIVG01025830001 Vitis vinifera HOM05D007667 ORTHO05D008033 8.2e-39 164.9 356 36.8
Lj1g0016001 Lotus japonicus HOM05D007667 ORTHO05D008033 1.1e-38 164.5 359 36.5
Psat0s3111g0200 Pisum sativum HOM05D007667 ORTHO05D008033 1.1e-38 164.5 340 37.4
Glyma.03G003800 Glycine max HOM05D007667 ORTHO05D008033 1.4e-38 164.1 336 39.9
Glyma.19G122200 Glycine max HOM05D007667 ORTHO05D008033 1.8e-38 163.7 346 38.2
Haze_20347 Corylus avellana HOM05D007667 ORTHO05D008033 4.1e-38 162.5 281 41.6
TPR.G23684 Trifolium pratense HOM05D007667 ORTHO05D008033 4.1e-38 162.5 313 37.7
Phvul.001G101500 Phaseolus vulgaris HOM05D007667 ORTHO05D008033 1.2e-37 161.0 348 37.6
Sabra06G0019700 Salix brachista HOM05D007667 ORTHO05D008033 1.2e-34 151.0 325 36.6
Potri.006G026600 Populus trichocarpa HOM05D007667 ORTHO05D008033 7.9e-34 148.3 325 36.6
TWI77G1010 Tripterygium wilfordii HOM05D007667 ORTHO05D008033 1.8e-33 147.1 336 35.1
SGA_v2.0_scaffold66G22329 Striga asiatica HOM05D007667 ORTHO05D008033 4.1e-30 136.0 307 34.5
Oeu060747.1 Olea europaea HOM05D007667 ORTHO05D008033 9.1e-30 134.8 316 33.2
Oeu041986.1 Olea europaea HOM05D007667 ORTHO05D008033 1.2e-29 134.4 320 31.9
CANSAT01G1982 Cannabis sativa HOM05D007667 ORTHO05D008033 1.5e-29 134.0 386 32.1
TAR623G0652 Trochodendron aralioides HOM05D007667 ORTHO05D008033 2.6e-29 133.3 373 30.3
CSS0027019 Camellia sinensis var. sinensis HOM05D007667 ORTHO05D008033 3.4e-29 132.9 275 37.8
PGR142G2092 Punica granatum HOM05D007667 ORTHO05D008033 5.9e-29 132.1 387 31.8
Ciclev10012153m.g Citrus clementina HOM05D007667 ORTHO05D008033 1.3e-28 131.0 350 32.6
Manes.08G067300 Manihot esculenta HOM05D007667 ORTHO05D008033 1.3e-28 131.0 235 39.1
Atru.chr8.918 Acer truncatum HOM05D007667 ORTHO05D008033 3.8e-28 129.4 304 35.2
Migut.J01575 Erythranthe guttata HOM05D007667 ORTHO05D008033 5.0e-28 129.0 350 32.3
Cc06_g20370 Coffea canephora HOM05D007667 ORTHO05D008033 1.9e-27 127.1 339 30.4
MBI13_g29622_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 1.4e-25 120.9 365 31.8
Aqoxy3G03841 Aquilegia oxysepala HOM05D007667 ORTHO05D008033 1.5e-24 117.5 321 31.2
Eucgr.K01702 Eucalyptus grandis HOM05D007667 ORTHO05D008033 1.5e-24 117.5 391 30.7
Hund19052 Selenicereus undatus HOM05D007667 ORTHO05D008033 1.5e-24 117.5 372 28.5
MSTRG.6277 Avicennia marina HOM05D007667 ORTHO05D008033 3.3e-24 116.3 350 31.7
PGSC0003DMG400029088 Solanum tuberosum HOM05D007667 ORTHO05D008033 1.2e-21 107.8 261 33.0
Solyc08g067000.3 Solanum lycopersicum HOM05D007667 ORTHO05D008033 1.0e-20 104.8 260 32.3
Nitab4.5_0002201g0030 Nicotiana tabacum HOM05D007667 ORTHO05D008033 1.3e-20 104.4 284 31.3
Sopen08g020950 Solanum pennellii HOM05D007667 ORTHO05D008033 8.5e-20 101.7 258 32.6
RcHm_v2.0_Chr3g0495051 Rosa chinensis HOM05D007667 ORTHO05D008033 1.4e-19 100.9 360 28.9
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 1.9e-19 100.5 323 31.3
CsaV3_4G028970 Cucumis sativus L. HOM05D007667 ORTHO05D008033 3.2e-19 99.8 390 28.2
Lalb_Chr22g0358161 Lupinus albus HOM05D007667 ORTHO05D008033 1.2e-18 97.8 105 50.5
SalBow6G3731 Salvia bowleyana HOM05D007667 ORTHO05D008033 1.6e-18 97.4 109 46.8
SalBow6G3030 Salvia bowleyana HOM05D007667 ORTHO05D008033 3.6e-18 96.3 106 47.2
ClCG10G016970 Citrullus lanatus HOM05D007667 ORTHO05D008033 2.3e-17 93.6 247 33.2
EL10Ac3g07362 Beta vulgaris HOM05D007667 ORTHO05D008033 1.5e-16 90.9 348 27.6
DCAR_020622 Daucus carota HOM05D007667 ORTHO05D008033 1.5e-16 90.9 134 44.8
Nn7g37184 Nelumbo nucifera HOM05D007667 ORTHO05D001109 2.0e-16 90.5 242 33.1
RhsimUnG0021200 Rhododendron simsii HOM05D007667 ORTHO05D008033 2.0e-16 90.5 373 27.9
THA.LOC104803305 Tarenaya hassleriana HOM05D009749 ORTHO05D008033 3.3e-16 89.7 292 30.1
Sed0023543 Sechium edule HOM05D007667 ORTHO05D008033 4.8e-15 85.9 299 30.8
ClCG04G005020 Citrullus lanatus HOM05D007667 ORTHO05D008033 6.3e-15 85.5 352 25.9
MELO3C030720.2 Cucumis melo HOM05D007667 ORTHO05D008033 1.4e-14 84.3 135 40.7
Ah.13g077440 Amaranthus hybridus HOM05D007667 ORTHO05D008033 1.8e-14 84.0 371 25.6
vmacro07594 Vaccinium macrocarpon HOM05D007667 ORTHO05D008033 1.8e-14 84.0 393 28.0
Sed0012185 Sechium edule HOM05D007667 ORTHO05D008033 3.1e-14 83.2 391 28.4
Dinv02787 Davidia involucrata HOM05D007667 ORTHO05D008033 4.1e-14 82.8 141 41.1
Sc13g0000730 Simmondsia chinensis HOM05D007667 ORTHO05D008033 5.3e-14 82.4 160 39.4
CsaV3_3G039420 Cucumis sativus L. HOM05D007667 ORTHO05D008033 2.6e-13 80.1 140 36.4
MELO3C019169.2 Cucumis melo HOM05D007667 ORTHO05D008033 3.5e-13 79.7 76 52.6
C06p23780 Brassica napus HOM05D009749 ORTHO05D008033 7.7e-13 78.6 234 31.2
BcaC08g44807 Brassica carinata HOM05D009749 ORTHO05D008033 1.0e-12 78.2 235 31.1
arahy.Tifrunner.gnm1.ann1.EU10QV Arachis hypogaea HOM05D007667 ORTHO05D008033 1.3e-12 77.8 172 36.6
Prupe.7G023900 Prunus persica HOM05D007667 ORTHO05D008033 3.8e-12 76.3 304 29.6
AT3G56810 Arabidopsis thaliana HOM05D009749 ORTHO05D008033 6.5e-12 75.5 325 25.2
Ca_08329_v3 Cicer arietinum L. HOM05D007667 ORTHO05D008033 6.5e-12 75.5 257 29.6
A07p23080 Brassica napus HOM05D009749 ORTHO05D008033 8.5e-12 75.1 240 30.4
C04p35700 Brassica napus HOM05D009749 ORTHO05D008033 8.5e-12 75.1 319 26.0
BraA07t29970Z Brassica rapa HOM05D009749 ORTHO05D008033 8.5e-12 75.1 240 30.4
Actinidia37860 Actinidia chinensis HOM05D007667 ORTHO05D008033 1.1e-11 74.7 205 28.3
BraA04t16080Z Brassica rapa HOM05D009749 ORTHO05D008033 1.1e-11 74.7 244 28.3
Carub.0005s2354 Capsella rubella HOM05D009749 ORTHO05D008033 1.1e-11 74.7 244 28.3
BcaB02g08346 Brassica carinata HOM05D009749 ORTHO05D008033 1.9e-11 73.9 234 28.2
BolC4t25234H Brassica oleracea HOM05D009749 ORTHO05D008033 2.5e-11 73.6 328 25.3
BolC6t37547H Brassica oleracea HOM05D009749 ORTHO05D008033 3.2e-11 73.2 241 28.6
BcaB02g07636 Brassica carinata HOM05D009749 ORTHO05D008033 4.2e-11 72.8 218 31.2
BcaC07g40118 Brassica carinata HOM05D009749 ORTHO05D008033 7.2e-11 72.0 242 27.3
A04p03560 Brassica napus HOM05D009749 ORTHO05D008033 1.2e-10 71.2 319 25.7
Dinv21555 Davidia involucrata HOM05D007667 ORTHO05D008033 3.6e-10 69.7 99 43.4
Lalb_Chr22g0358171 Lupinus albus HOM05D007667 ORTHO05D008033 3.6e-10 69.7 167 35.9
MBI13_g08646_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 3.6e-10 69.7 66 51.5
Cfa010473 Carpinus fangiana HOM05D007667 ORTHO05D008033 6.1e-10 68.9 150 42.0
PSO339G5815 Papaver somniferum HOM05D007667 ORTHO05D008033 6.1e-10 68.9 454 24.2
AUR62020980 Chenopodium quinoa HOM05D007667 ORTHO05D008033 8.0e-10 68.6 136 38.2
Lj1A1064T35 Lonicera japonica HOM05D007667 ORTHO05D008033 8.0e-10 68.6 185 32.4
Thhalv10006250m.g Eutrema salsugineum HOM05D009749 ORTHO05D008033 1.4e-09 67.8 88 43.2
CARHR166960 Cardamine hirsuta HOM05D009749 ORTHO05D008033 2.3e-09 67.0 92 41.3
Sp5g05780 Schrenkiella parvula HOM05D009749 ORTHO05D008033 2.3e-09 67.0 324 24.1
BcaC07g39991 Brassica carinata HOM05D009749 ORTHO05D008033 3.0e-09 66.6 320 24.1
BolC8t50822H Brassica oleracea HOM05D009749 ORTHO05D008033 3.0e-09 66.6 320 24.1
PSO384G0308 Papaver somniferum HOM05D007667 ORTHO05D008033 4.0e-09 66.2 95 44.2
arahy.Tifrunner.gnm1.ann1.8XR3F9 Arachis hypogaea HOM05D007667 ORTHO05D008033 6.7e-09 65.5 172 34.3
arahy.Tifrunner.gnm1.ann1.NYTL45 Arachis hypogaea HOM05D007667 ORTHO05D008033 8.8e-09 65.1 106 40.6
arahy.Tifrunner.gnm1.ann1.S7MPKE Arachis hypogaea HOM05D007667 ORTHO05D008033 1.2e-08 64.7 98 39.8
C08p32040 Brassica napus HOM05D009749 ORTHO05D008033 1.2e-08 64.7 320 24.4
AUR62020979 Chenopodium quinoa HOM05D003743 ORTHO05D004311 1.5e-08 64.3 81 48.1
CDE02G4005 Ceratophyllum demersum HOM05D000558 ORTHO05D008033 2.6e-08 63.5 308 25.3
AL5G38190 Arabidopsis lyrata HOM05D009749 ORTHO05D008033 4.4e-08 62.8 328 25.0
A09p49630 Brassica napus HOM05D009749 ORTHO05D008033 5.7e-08 62.4 320 24.4
BraA09t40416Z Brassica rapa HOM05D009749 ORTHO05D008033 5.7e-08 62.4 320 24.4
arahy.Tifrunner.gnm1.ann1.3W78Z9 Arachis hypogaea HOM05D007667 ORTHO05D008033 7.5e-08 62.0 143 33.6
HPP92_012452 Vanilla planifolia HOM05D007667 ORTHO05D008033 3.7e-07 59.7 172 32.0
arahy.Tifrunner.gnm1.ann1.48UEJW Arachis hypogaea HOM05D007667 ORTHO05D008033 1.8e-06 57.4 95 38.9
arahy.Tifrunner.gnm1.ann1.8931ZB Arachis hypogaea HOM05D007667 ORTHO05D008033 4.1e-06 56.2 146 33.6
HPP92_014340 Vanilla planifolia HOM05D007667 ORTHO05D008033 9.1e-06 55.1 163 30.7


User provided reference genes

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