Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib128G0131 Durio zibethinus HOM05D007737 ORTHO05D009754 1.1e-87 326.6 165 100.0
Thecc.10G000900 Theobroma cacao HOM05D007737 ORTHO05D009754 2.8e-67 258.8 164 80.5
Gohir.A05G333700 Gossypium hirsutum HOM05D007737 ORTHO05D009754 4.1e-55 218.4 164 67.1
Gohir.D04G072800 Gossypium hirsutum HOM05D007737 ORTHO05D009754 1.2e-54 216.9 164 67.1
Gorai.012G081800 Gossypium raimondii HOM05D007737 ORTHO05D009754 2.7e-54 215.7 164 66.5
Dinv43570 Davidia involucrata HOM05D007737 ORTHO05D009754 7.3e-52 207.6 167 68.9
COL.COLO4_19346 Corchorus olitorius HOM05D007737 ORTHO05D009754 1.4e-50 203.4 157 65.0
Oeu029042.1 Olea europaea HOM05D007737 ORTHO05D009754 9.2e-47 190.7 166 53.6
Hma1.2p1_0601F.1_g187210 Hydrangea macrophylla HOM05D007737 ORTHO05D009754 4.3e-44 181.8 170 57.1
QL04p025132 Quercus lobata HOM05D007737 ORTHO05D009754 1.8e-42 176.4 166 62.7
CSS0024286 Camellia sinensis var. sinensis HOM05D007737 ORTHO05D009754 4.0e-42 175.3 168 60.1
arahy.Tifrunner.gnm1.ann1.BW18VB Arachis hypogaea HOM05D007737 ORTHO05D009754 1.9e-39 166.4 137 66.4
arahy.Tifrunner.gnm1.ann1.HH45UC Arachis hypogaea HOM05D007737 ORTHO05D009754 3.2e-39 165.6 137 65.7
LjContig00564g0006359 Lotus japonicus HOM05D007737 ORTHO05D009754 5.4e-39 164.9 135 66.7
RcHm_v2.0_Chr0c20g0500251 Rosa chinensis HOM05D007737 ORTHO05D009754 7.1e-39 164.5 154 52.6
Migut.N01704 Erythranthe guttata HOM05D007737 ORTHO05D009754 9.2e-39 164.1 139 57.6
Manes.12G126400 Manihot esculenta HOM05D007737 ORTHO05D009754 2.1e-38 162.9 182 48.4
Cc02_g25850 Coffea canephora HOM05D007737 ORTHO05D009754 2.7e-38 162.5 140 58.6
CiPaw.13G019700 Carya illinoinensis HOM05D007737 ORTHO05D009754 6.0e-38 161.4 156 61.5
arahy.Tifrunner.gnm1.ann1.J0MG2W Arachis hypogaea HOM05D007737 ORTHO05D009754 1.3e-37 160.2 137 58.4
Lalb_Chr17g0347681 Lupinus albus HOM05D007737 ORTHO05D009754 1.3e-37 160.2 135 65.2
MD02G1228500 Malus domestica HOM05D007737 ORTHO05D009754 3.9e-37 158.7 154 61.0
Sed0019089 Sechium edule HOM05D007737 ORTHO05D009754 5.1e-37 158.3 140 63.6
PGSC0003DMG400015652 Solanum tuberosum HOM05D007737 ORTHO05D009754 5.1e-37 158.3 130 56.9
Glyma.02G276300 Glycine max HOM05D007737 ORTHO05D009754 8.6e-37 157.5 137 63.5
Eucgr.D01138 Eucalyptus grandis HOM05D007737 ORTHO05D009754 1.1e-36 157.1 156 60.3
Solyc06g051160.4 Solanum lycopersicum HOM05D007737 ORTHO05D009754 1.1e-36 157.1 131 56.5
CsaV3_6G006540 Cucumis sativus L. HOM05D007737 ORTHO05D009754 1.9e-36 156.4 139 61.9
DCAR_029388 Daucus carota HOM05D007737 ORTHO05D009754 4.3e-36 155.2 160 48.1
MSTRG.4970 Avicennia marina HOM05D007737 ORTHO05D009754 7.3e-36 154.5 134 54.5
HanXRQChr06g0168511 Helianthus annuus HOM05D007737 ORTHO05D009754 9.6e-36 154.1 102 66.7
FvH4_7g08430 Fragaria vesca HOM05D007737 ORTHO05D009754 1.1e-34 150.6 154 55.2
CANSAT35G0994 Cannabis sativa HOM05D007737 ORTHO05D009754 3.1e-34 149.1 137 54.0
Lsat_1_v5_gn_7_11721 Lactuca sativa HOM05D007737 ORTHO05D009754 3.1e-34 149.1 108 63.0
Sabra14G0139900 Salix brachista HOM05D007737 ORTHO05D009754 3.1e-34 149.1 97 67.0
Psat0s2829g0120 Pisum sativum HOM05D007737 ORTHO05D009754 5.2e-34 148.3 138 57.2
TAR375G1083 Trochodendron aralioides HOM05D007737 ORTHO05D009754 6.9e-34 147.9 157 51.6
Nitab4.5_0011440g0030 Nicotiana tabacum HOM05D007737 ORTHO05D009754 8.9e-34 147.5 113 60.2
Phvul.008G205200 Phaseolus vulgaris HOM05D007737 ORTHO05D009754 8.9e-34 147.5 135 62.2
Sc02g0003320 Simmondsia chinensis HOM05D007737 ORTHO05D009754 8.9e-34 147.5 123 63.4
Psat0s4349g0040 Pisum sativum HOM05D007737 ORTHO05D009754 1.5e-33 146.7 133 58.6
Actinidia30967 Actinidia chinensis HOM05D007737 ORTHO05D009754 2.6e-33 146.0 165 48.5
FAN03G2224 Fragaria x ananassa HOM05D007737 ORTHO05D009754 3.4e-33 145.6 144 57.6
PGR119G2515 Punica granatum HOM05D007737 ORTHO05D009754 3.4e-33 145.6 123 61.0
Ciclev10022762m.g Citrus clementina HOM05D007737 ORTHO05D009754 9.9e-33 144.1 125 60.8
SalBow4G2387 Salvia bowleyana HOM05D007737 ORTHO05D009754 1.3e-32 143.7 173 45.7
Actinidia05801 Actinidia chinensis HOM05D007737 ORTHO05D009754 1.7e-32 143.3 152 49.3
ECA236G0282 Erigeron canadensis HOM05D007737 ORTHO05D009754 8.4e-32 141.0 138 58.7
TWI14G0846 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 1.4e-31 140.2 158 46.2
GSVIVG01018401001 Vitis vinifera HOM05D007737 ORTHO05D009754 3.2e-31 139.0 153 55.6
arahy.Tifrunner.gnm1.ann1.4BAK6K Arachis hypogaea HOM05D004879 ORTHO05D009754 4.2e-31 138.7 101 65.3
Psat0s4932g0040 Pisum sativum HOM05D007737 ORTHO05D009754 4.2e-31 138.7 138 58.0
CAN.G1183.16 Capsicum annuum HOM05D007737 ORTHO05D009754 7.1e-31 137.9 99 70.7
TWI23G0770 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 7.1e-31 137.9 157 45.9
SGA_v2.0_scaffold77G25232 Striga asiatica HOM05D007737 ORTHO05D009754 1.3e-29 133.7 120 50.8
PSO210G3843 Papaver somniferum HOM05D007737 ORTHO05D009754 3.9e-29 132.1 119 58.8
Potri.014G179800 Populus trichocarpa HOM05D007737 ORTHO05D009754 3.9e-29 132.1 102 67.6
PSO210G3425 Papaver somniferum HOM05D007737 ORTHO05D009754 6.6e-29 131.3 102 64.7
AUR62023349 Chenopodium quinoa HOM05D007737 ORTHO05D009754 4.3e-28 128.6 133 55.6
Os04g0589200 Oryza sativa ssp. japonica HOM05D007737 ORTHO05D009754 2.8e-27 125.9 97 61.9
FAN10G0020 Fragaria x ananassa HOM05D007737 ORTHO05D009754 1.1e-26 124.0 141 54.6
AUR62013808 Chenopodium quinoa HOM05D007737 ORTHO05D009754 6.9e-26 121.3 131 51.9
Sopen06g017020 Solanum pennellii HOM05D007737 ORTHO05D009754 2.2e-24 116.3 82 64.6
Atru.chr5.19 Acer truncatum HOM05D007737 ORTHO05D009754 4.9e-24 115.2 96 63.5
THA.LOC104806480 Tarenaya hassleriana HOM05D007737 ORTHO05D009754 1.1e-23 114.0 104 57.7
Prupe.2G111200 Prunus persica HOM05D007737 ORTHO05D009754 3.2e-23 112.5 115 55.7
Mapoly0099s0043 Marchantia polymorpha HOM05D007737 ORTHO05D009754 2.7e-22 109.4 86 67.4
HPP92_007265 Vanilla planifolia HOM05D007737 ORTHO05D009754 1.0e-21 107.5 113 52.2
Carub.0003s1738 Capsella rubella HOM05D007737 ORTHO05D009754 3.9e-21 105.5 100 58.0
unitig_22.g5837 Utricularia gibba HOM05D007737 ORTHO05D009754 6.7e-21 104.8 83 67.5
Medtr5g088570 Medicago truncatula HOM05D004879 ORTHO05D008271 8.7e-21 104.4 93 59.1
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 1.9e-20 103.2 105 46.7
BraA01t03730Z Brassica rapa HOM05D007737 ORTHO05D009754 2.5e-20 102.8 121 48.8
AL3G30770 Arabidopsis lyrata HOM05D007737 ORTHO05D009754 7.4e-20 101.3 120 50.8
Sp3g15800 Schrenkiella parvula HOM05D007737 ORTHO05D009754 3.6e-19 99.0 116 50.0
Nitab4.5_0000507g0110 Nicotiana tabacum HOM05D007737 ORTHO05D009754 8.1e-19 97.8 98 51.0
BcaC09g48726 Brassica carinata HOM05D001802 ORTHO05D001788 1.1e-18 97.4 121 47.9
C01p46550 Brassica napus HOM05D007737 ORTHO05D009754 1.1e-18 97.4 121 47.9
Thhalv10021734m.g Eutrema salsugineum HOM05D007737 ORTHO05D009754 1.4e-18 97.1 131 46.6
CARHR093000 Cardamine hirsuta HOM05D007737 ORTHO05D009754 1.8e-18 96.7 100 54.0
AT3G17668 Arabidopsis thaliana HOM05D007737 ORTHO05D009754 3.1e-18 95.9 100 53.0
AagrBONN_evm.TU.Sc2ySwM_344.418 Anthoceros agrestis HOM05D007737 ORTHO05D009754 2.6e-17 92.8 97 42.3
BcaB04g20827 Brassica carinata HOM05D001802 ORTHO05D001788 4.5e-17 92.0 131 45.0
Pp3c17_5190 Physcomitrium patens HOM05D007737 ORTHO05D009754 1.7e-16 90.1 91 57.1
ClCG06G000750 Citrullus lanatus HOM05D007737 ORTHO05D009754 3.8e-16 89.0 81 59.3
Pp3c8_23020 Physcomitrium patens HOM05D007737 ORTHO05D009754 4.9e-16 88.6 91 58.2
Aqoxy3G02490 Aquilegia oxysepala HOM05D007737 ORTHO05D009754 6.4e-16 88.2 106 48.1
vmacro13551 Vaccinium macrocarpon HOM05D007737 ORTHO05D009754 1.6e-14 83.6 190 31.6
FAN06G2876 Fragaria x ananassa HOM05D007737 ORTHO05D009754 4.6e-14 82.0 81 53.1
HPP92_007269 Vanilla planifolia HOM05D007737 ORTHO05D009754 1.4e-10 70.5 76 46.1
MELO3C022466.2 Cucumis melo HOM05D007737 ORTHO05D009754 2.9e-08 62.8 139 32.4
Cre02.g091193 Chlamydomonas reinhardtii HOM05D007737 ORTHO05D009754 1.1e-07 60.8 121 33.9
A01p36650 Brassica napus HOM05D007737 ORTHO05D009754 2.7e-06 56.2 46 50.0


User provided reference genes

Program Settings