Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib116G0900 Durio zibethinus HOM05D005921 ORTHO05D007374 2.3e-259 898.3 427 100.0
Thecc.08G159700 Theobroma cacao HOM05D005921 ORTHO05D007374 2.4e-232 808.5 427 89.5
Gohir.A05G270866 Gossypium hirsutum HOM05D005921 ORTHO05D007374 4.4e-218 761.1 425 84.7
COL.COLO4_13778 Corchorus olitorius HOM05D005921 ORTHO05D007374 9.9e-218 760.0 498 75.1
Gorai.009G286300 Gossypium raimondii HOM05D005921 ORTHO05D007374 2.9e-217 758.4 425 84.5
Atru.chr13.2001 Acer truncatum HOM05D005921 ORTHO05D007374 6.9e-203 710.7 425 77.6
Ciclev10003457m.g Citrus clementina HOM05D005921 ORTHO05D007374 5.8e-202 707.6 427 77.8
GSVIVG01001409001 Vitis vinifera HOM05D005921 ORTHO05D007374 5.8e-202 707.6 429 77.9
Potri.005G197000 Populus trichocarpa HOM05D005921 ORTHO05D007374 2.2e-201 705.7 427 77.0
TWI32G1095 Tripterygium wilfordii HOM05D005921 ORTHO05D007374 2.8e-196 688.7 446 73.1
Gohir.D05G273101 Gossypium hirsutum HOM05D005921 ORTHO05D007374 7.6e-194 680.6 425 77.9
CANSAT25G0895 Cannabis sativa HOM05D005921 ORTHO05D007374 1.3e-193 679.9 428 73.6
Cfa018279 Carpinus fangiana HOM05D005921 ORTHO05D007374 2.2e-193 679.1 416 76.2
Ca_10662_v3 Cicer arietinum L. HOM05D005921 ORTHO05D007374 2.2e-193 679.1 429 72.7
Medtr1g097955 Medicago truncatula HOM05D005921 ORTHO05D007374 5.4e-192 674.5 427 72.4
Hma1.2p1_0358F.1_g134840 Hydrangea macrophylla HOM05D005921 ORTHO05D007374 7.9e-191 670.6 419 73.7
AT1G71696 Arabidopsis thaliana HOM05D005921 ORTHO05D007374 6.7e-190 667.5 427 71.4
Lalb_Chr06g0161731 Lupinus albus HOM05D005921 ORTHO05D007374 8.7e-190 667.2 409 73.3
MD05G1033700 Malus domestica HOM05D005921 ORTHO05D007374 8.7e-190 667.2 425 74.6
Lj5g0014499 Lotus japonicus HOM05D005921 ORTHO05D007374 1.1e-189 666.8 410 73.2
Rhsim11G0087800 Rhododendron simsii HOM05D005921 ORTHO05D007374 1.1e-189 666.8 425 75.1
Aa31LG4G8950 Aethionema arabicum HOM05D005921 ORTHO05D007374 2.5e-189 665.6 425 71.1
Glyma.10G221400 Glycine max HOM05D005921 ORTHO05D007374 5.6e-189 664.5 429 69.9
Eucgr.F04188 Eucalyptus grandis HOM05D005921 ORTHO05D007374 1.3e-188 663.3 420 73.1
RcHm_v2.0_Chr6g0274201 Rosa chinensis HOM05D005921 ORTHO05D007374 1.3e-188 663.3 418 75.6
Manes.02G183400 Manihot esculenta HOM05D005921 ORTHO05D007374 2.1e-188 662.5 423 74.5
vmacro01494 Vaccinium macrocarpon HOM05D005921 ORTHO05D007374 2.1e-188 662.5 438 72.1
Sp5g26720 Schrenkiella parvula HOM05D005921 ORTHO05D007374 6.2e-188 661.0 427 71.7
Lalb_Chr02g0141581 Lupinus albus HOM05D005921 ORTHO05D007374 8.1e-188 660.6 410 72.2
AL2G31250 Arabidopsis lyrata HOM05D005921 ORTHO05D007374 1.8e-187 659.4 427 70.3
Thhalv10018610m.g Eutrema salsugineum HOM05D005921 ORTHO05D007374 3.1e-187 658.7 427 71.0
Psat0s899g0040 Pisum sativum HOM05D005921 ORTHO05D007374 3.1e-187 658.7 413 72.4
arahy.Tifrunner.gnm1.ann1.9JVG50 Arachis hypogaea HOM05D005921 ORTHO05D007374 5.3e-187 657.9 420 70.2
arahy.Tifrunner.gnm1.ann1.TV90AE Arachis hypogaea HOM05D005921 ORTHO05D007374 5.3e-187 657.9 420 70.2
TPR.G17011 Trifolium pratense HOM05D005921 ORTHO05D007374 5.3e-187 657.9 428 71.0
CiPaw.15G012300 Carya illinoinensis HOM05D005921 ORTHO05D007374 9.0e-187 657.1 429 73.0
Prupe.8G040700 Prunus persica HOM05D005921 ORTHO05D007374 9.0e-187 657.1 429 72.5
Glyma.20G170200 Glycine max HOM05D005921 ORTHO05D007374 1.7e-185 652.9 429 69.0
CsaV3_6G004990 Cucumis sativus L. HOM05D005921 ORTHO05D007374 6.4e-185 651.0 426 70.9
TAR381G0629 Trochodendron aralioides HOM05D005921 ORTHO05D007374 2.7e-183 645.6 419 72.1
ClCG08G007340 Citrullus lanatus HOM05D005921 ORTHO05D007374 3.5e-183 645.2 429 70.6
Carub.0002s1845 Capsella rubella HOM05D005921 ORTHO05D007374 7.9e-183 644.0 427 68.6
VMungo0720G0456 Vigna mungo HOM05D005921 ORTHO05D007374 1.3e-182 643.3 414 71.0
CSS0006668 Camellia sinensis var. sinensis HOM05D005921 ORTHO05D007374 3.9e-182 641.7 377 78.0
A02p17260 Brassica napus HOM05D005921 ORTHO05D007374 1.1e-181 640.2 427 70.5
BcaB05g24658 Brassica carinata HOM05D005921 ORTHO05D007374 1.5e-181 639.8 427 70.0
BcaC03g15284 Brassica carinata HOM05D005921 ORTHO05D007374 3.3e-181 638.6 427 70.5
Cc10_g15280 Coffea canephora HOM05D005921 ORTHO05D007374 6.2e-180 634.4 419 70.2
EL10Ac1g01606 Beta vulgaris HOM05D005921 ORTHO05D007374 1.4e-179 633.3 418 69.9
C02p28900 Brassica napus HOM05D005921 ORTHO05D007374 9.0e-179 630.6 443 68.2
MBI01_g34168_MAGBIO Magnolia biondii HOM05D005921 ORTHO05D007374 2.6e-178 629.0 418 69.6
Migut.N02950 Erythranthe guttata HOM05D005921 ORTHO05D007374 3.4e-178 628.6 420 69.5
Eucgr.L02800 Eucalyptus grandis HOM05D005921 ORTHO05D007374 3.4e-178 628.6 470 64.7
PGR044G0568 Punica granatum HOM05D005921 ORTHO05D007374 5.8e-178 627.9 430 67.9
FAN24G0054 Fragaria x ananassa HOM05D005921 ORTHO05D007374 7.6e-178 627.5 408 73.3
CAN.G1252.3 Capsicum annuum HOM05D005921 ORTHO05D007374 2.9e-177 625.5 429 67.1
Phvul.007G083600 Phaseolus vulgaris HOM05D005921 ORTHO05D007374 4.9e-177 624.8 405 69.9
CDE04G2034 Ceratophyllum demersum HOM05D005921 ORTHO05D007374 2.5e-176 622.5 422 67.8
Sed0007537 Sechium edule HOM05D005921 ORTHO05D007374 2.5e-176 622.5 426 68.1
Sopen04g027990 Solanum pennellii HOM05D005921 ORTHO05D007374 2.1e-175 619.4 429 66.9
Solyc04g072010.3 Solanum lycopersicum HOM05D005921 ORTHO05D007374 2.7e-175 619.0 429 66.7
FvH4_2g13020 Fragaria vesca HOM05D005921 ORTHO05D007374 3.5e-175 618.6 408 72.1
Aqoxy6G00427 Aquilegia oxysepala HOM05D005921 ORTHO05D007374 1.3e-174 616.7 432 66.4
CARHR291100 Cardamine hirsuta HOM05D005921 ORTHO05D007374 5.1e-174 614.8 399 69.9
Sc02g0003820 Simmondsia chinensis HOM05D005921 ORTHO05D007374 5.1e-174 614.8 396 73.2
HanXRQChr02g0042431 Helianthus annuus HOM05D005921 ORTHO05D007374 5.7e-173 611.3 415 69.6
Peaxi162Scf00360g00056 Petunia axillaris HOM05D005921 ORTHO05D007374 7.4e-173 610.9 447 64.4
FAN27G2380 Fragaria x ananassa HOM05D005921 ORTHO05D007374 5.3e-171 604.7 430 67.9
Ah.05g168190 Amaranthus hybridus HOM05D005921 ORTHO05D007374 6.9e-171 604.4 395 71.1
Hund26678 Selenicereus undatus HOM05D005921 ORTHO05D007374 3.4e-170 602.1 467 62.5
PSO675G2388 Papaver somniferum HOM05D005921 ORTHO05D007374 6.5e-169 597.8 412 67.2
MELO3C019977.2 Cucumis melo HOM05D005921 ORTHO05D007374 1.9e-168 596.3 389 71.5
MSTRG.24492 Avicennia marina HOM05D005921 ORTHO05D007374 9.4e-168 594.0 427 67.4
MSTRG.22109 Avicennia marina HOM05D005921 ORTHO05D007374 3.9e-166 588.6 420 65.5
Lsat_1_v5_gn_1_5181 Lactuca sativa HOM05D005921 ORTHO05D007374 1.1e-165 587.0 429 64.3
Lj7A383T42 Lonicera japonica HOM05D005921 ORTHO05D007374 1.3e-164 583.6 431 67.3
unitig_578.g16229 Utricularia gibba HOM05D005921 ORTHO05D007374 8.2e-164 580.9 411 65.9
SalBow6G1744 Salvia bowleyana HOM05D005921 ORTHO05D007374 3.4e-162 575.5 439 62.4
Sabra05G0149900 Salix brachista HOM05D005921 ORTHO05D007374 2.2e-161 572.8 427 66.7
Zm00001eb377250 Zea mays HOM05D005921 ORTHO05D007374 2.9e-161 572.4 463 59.8
ECA247G3881 Erigeron canadensis HOM05D005921 ORTHO05D007374 3.8e-161 572.0 346 74.3
FAN15G3525 Fragaria x ananassa HOM05D005921 ORTHO05D007374 3.8e-161 572.0 432 65.3
Lj4A704G63 Lonicera japonica HOM05D005921 ORTHO05D007374 1.4e-155 553.5 349 73.4
AUR62034891 Chenopodium quinoa HOM05D005921 ORTHO05D007374 7.0e-155 551.2 393 65.9
ATR1120G060 Amborella trichopoda HOM05D004165 ORTHO05D005063 2.6e-154 549.3 394 65.0
FAN20G2564 Fragaria x ananassa HOM05D005921 ORTHO05D007374 2.9e-145 519.2 432 61.1
AUR62026635 Chenopodium quinoa HOM05D005921 ORTHO05D007374 4.2e-144 515.4 383 64.2
Cpa.g.sc26.80 Carica papaya HOM05D005921 ORTHO05D007374 9.4e-144 514.2 327 72.8
Hma1.2p1_0358F.1_g134830 Hydrangea macrophylla HOM05D005921 ORTHO05D007374 8.8e-142 507.7 280 81.4
DCAR_001188 Daucus carota HOM05D005921 ORTHO05D007374 3.7e-140 502.3 296 77.4
Nn5g28835 Nelumbo nucifera HOM05D005921 ORTHO05D007374 7.0e-139 498.0 329 69.9
SGA_v2.0_scaffold54G19682 Striga asiatica HOM05D005921 ORTHO05D007374 4.5e-138 495.4 395 61.0
Nitab4.5_0013157g0020 Nicotiana tabacum HOM05D005921 ORTHO05D007374 3.2e-136 489.2 354 65.8
Nitab4.5_0000099g0240 Nicotiana tabacum HOM05D005921 ORTHO05D007374 2.3e-134 483.0 509 50.7
Mapoly0096s0032 Marchantia polymorpha HOM05D005921 ORTHO05D007374 2.9e-129 466.1 362 58.8
Ciclev10003529m.g Citrus clementina HOM05D005921 ORTHO05D007374 5.0e-129 465.3 374 64.4
SMO116G0063 Selaginella moellendorffii HOM05D005921 ORTHO05D007374 5.0e-129 465.3 428 54.7
HPP92_000681 Vanilla planifolia HOM05D005921 ORTHO05D007374 1.6e-122 443.7 332 63.3
AagrBONN_evm.TU.Sc2ySwM_344.3190 Anthoceros agrestis HOM05D005921 ORTHO05D007374 1.0e-121 441.0 368 56.0
Pp3c16_14030 Physcomitrium patens HOM05D005921 ORTHO05D007374 2.5e-120 436.4 328 58.8
Haze_17806 Corylus avellana HOM05D005921 ORTHO05D007374 6.2e-111 405.2 268 72.0
QL02p037446 Quercus lobata HOM05D005921 ORTHO05D007374 1.4e-102 377.5 249 70.3
QL02p037946 Quercus lobata HOM05D005921 ORTHO05D007374 1.4e-102 377.5 249 70.3
HPP92_000638 Vanilla planifolia HOM05D005921 ORTHO05D007374 6.8e-94 348.6 325 54.2
SHI09099 Sapria himalayana HOM05D005921 ORTHO05D007374 1.2e-93 347.8 297 57.9
Pp3c6_12100 Physcomitrium patens HOM05D005921 ORTHO05D007374 1.5e-93 347.4 367 47.4
CBR_g30849 Chara braunii HOM05D005921 ORTHO05D007374 4.6e-90 335.9 337 47.2
QL02p037958 Quercus lobata HOM05D005921 ORTHO05D007374 3.6e-87 326.2 178 83.1
QL02p037460 Quercus lobata HOM05D005921 ORTHO05D007374 1.8e-86 323.9 178 82.6
Oeu017621.1 Olea europaea HOM05D005921 ORTHO05D007374 2.4e-86 323.6 179 80.4
BraA02t06774Z Brassica rapa HOM05D005921 ORTHO05D007374 1.6e-82 310.8 178 79.8
BolC2t08937H Brassica oleracea HOM05D005921 ORTHO05D007374 2.7e-82 310.1 178 79.8
BolC2t08936H Brassica oleracea HOM05D005921 ORTHO05D007374 2.4e-75 287.0 240 59.6
BraA02t06773Z Brassica rapa HOM05D005921 ORTHO05D007374 1.6e-74 284.3 233 60.1
MCO15G195 Micromonas commoda HOM05D005921 ORTHO05D007374 3.9e-65 253.1 370 37.0
PRCOL_00005633 Prasinoderma coloniale HOM05D005921 ORTHO05D007374 1.9e-64 250.8 312 42.0
SEGI_33860 Sequoiadendron giganteum HOM05D005921 ORTHO05D007374 9.0e-54 215.3 162 63.6
Os06g0144600 Oryza sativa ssp. japonica HOM05D005921 ORTHO05D007374 7.7e-53 212.2 127 76.4
Zm00001eb035610 Zea mays HOM05D005921 ORTHO05D007374 1.3e-52 211.5 127 75.6
Zm00001eb246880 Zea mays HOM05D005921 ORTHO05D007374 3.2e-43 180.3 106 75.5
SEGI_16149 Sequoiadendron giganteum HOM05D005921 ORTHO05D007374 2.0e-37 161.0 98 69.4
Cre07.g335900 Chlamydomonas reinhardtii HOM05D005921 ORTHO05D007374 3.5e-37 160.2 340 33.8
Duzib093G1718 Durio zibethinus HOM05D005921 ORTHO05D007374 3.9e-33 146.7 73 91.8
SHI09097 Sapria himalayana HOM05D005921 ORTHO05D007374 1.7e-31 141.4 74 81.1
Cre06.g309450 Chlamydomonas reinhardtii HOM05D005921 ORTHO05D007374 1.8e-30 137.9 340 30.6
MD10G1034600 Malus domestica HOM05D005921 ORTHO05D007374 2.6e-29 134.0 128 53.9
Zm00001eb035620 Zea mays HOM05D005921 ORTHO05D007374 4.5e-21 106.7 55 80.0
Sabra02G0051300 Salix brachista HOM05D005921 ORTHO05D007374 2.2e-20 104.4 112 55.4
Pp3c27_7150 Physcomitrium patens HOM05D005921 ORTHO05D007374 1.2e-18 98.6 377 25.2
Prupe.8G040900 Prunus persica HOM05D005921 ORTHO05D007374 3.5e-13 80.5 101 45.5


User provided reference genes

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