Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib116G0889 Durio zibethinus HOM05D005090 ORTHO05D006142 5.3e-93 344.4 174 100.0
Duzib093G0455 Durio zibethinus HOM05D005090 ORTHO05D006142 1.5e-76 289.7 174 84.5
Duzib041G0676 Durio zibethinus HOM05D005090 ORTHO05D006142 2.7e-73 278.9 174 82.8
Gorai.010G022500 Gossypium raimondii HOM05D005090 ORTHO05D006142 1.0e-72 276.9 177 82.5
Gohir.D06G019036 Gossypium hirsutum HOM05D005090 ORTHO05D006142 6.3e-70 267.7 179 79.3
Thecc.08G002400 Theobroma cacao HOM05D005090 ORTHO05D006142 4.6e-65 251.5 174 76.4
COL.COLO4_10129 Corchorus olitorius HOM05D005090 ORTHO05D006142 6.1e-65 251.1 206 67.5
FAN15G0851 Fragaria x ananassa HOM05D005090 ORTHO05D006142 6.5e-59 231.1 175 69.1
FAN27G2315 Fragaria x ananassa HOM05D005090 ORTHO05D006142 3.2e-58 228.8 175 68.6
Cpa.g.sc21.163 Carica papaya HOM05D005090 ORTHO05D006142 7.2e-58 227.6 171 69.6
FvH4_2g33950 Fragaria vesca HOM05D005090 ORTHO05D006142 9.4e-58 227.3 175 68.0
FAN24G0633 Fragaria x ananassa HOM05D005090 ORTHO05D006142 9.4e-58 227.3 175 68.0
TWI36G0811 Tripterygium wilfordii HOM05D005090 ORTHO05D006142 9.4e-58 227.3 181 66.9
RcHm_v2.0_Chr6g0308461 Rosa chinensis HOM05D005090 ORTHO05D006142 1.2e-57 226.9 175 66.9
FAN20G1047 Fragaria x ananassa HOM05D005090 ORTHO05D006142 1.6e-57 226.5 175 68.0
Prupe.1G431400 Prunus persica HOM05D005090 ORTHO05D006142 6.7e-56 221.1 174 67.8
Cfa009959 Carpinus fangiana HOM05D005090 ORTHO05D006142 1.5e-55 219.9 170 65.9
Ciclev10002608m.g Citrus clementina HOM05D005090 ORTHO05D006142 1.5e-55 219.9 175 67.4
MD08G1095400 Malus domestica HOM05D005090 ORTHO05D006142 2.6e-55 219.2 175 68.6
Atru.chr13.741 Acer truncatum HOM05D005090 ORTHO05D006142 4.4e-55 218.4 174 66.7
CiPaw.15G053600 Carya illinoinensis HOM05D005090 ORTHO05D006142 2.8e-54 215.7 171 68.4
VMungo0647G1453 Vigna mungo HOM05D005090 ORTHO05D006142 2.8e-54 215.7 171 67.3
Phvul.001G024300 Phaseolus vulgaris HOM05D005090 ORTHO05D006142 8.2e-54 214.2 173 67.1
Manes.18G040700 Manihot esculenta HOM05D005090 ORTHO05D006142 1.1e-53 213.8 169 68.6
GSVIVG01009445001 Vitis vinifera HOM05D005090 ORTHO05D006142 1.4e-53 213.4 162 69.8
Potri.014G024500 Populus trichocarpa HOM05D005090 ORTHO05D006142 3.1e-53 212.2 175 66.3
Sabra14G0016700 Salix brachista HOM05D005090 ORTHO05D006142 3.4e-52 208.8 178 63.5
arahy.Tifrunner.gnm1.ann1.LLUM42 Arachis hypogaea HOM05D005090 ORTHO05D006142 7.7e-52 207.6 176 62.5
arahy.Tifrunner.gnm1.ann1.Q1327U Arachis hypogaea HOM05D005090 ORTHO05D006142 7.7e-52 207.6 176 62.5
Lalb_Chr22g0354971 Lupinus albus HOM05D005090 ORTHO05D006142 1.0e-51 207.2 167 64.7
MD15G1077900 Malus domestica HOM05D005090 ORTHO05D006142 1.3e-51 206.8 174 64.9
TAR376G0388 Trochodendron aralioides HOM05D005090 ORTHO05D006142 2.2e-51 206.1 168 64.3
Glyma.14G085300 Glycine max HOM05D005090 ORTHO05D006142 5.0e-51 204.9 148 71.6
PGR031G1041 Punica granatum HOM05D005090 ORTHO05D006142 6.5e-51 204.5 171 63.7
Actinidia22653 Actinidia chinensis HOM05D005090 ORTHO05D006142 1.1e-50 203.8 172 61.6
Medtr1g018930 Medicago truncatula HOM05D005090 ORTHO05D006142 1.1e-50 203.8 167 62.3
Potri.002G123400 Populus trichocarpa HOM05D005090 ORTHO05D006142 1.4e-50 203.4 173 63.0
Glyma.17G239400 Glycine max HOM05D005090 ORTHO05D006142 1.9e-50 203.0 170 64.7
CSS0005413 Camellia sinensis var. sinensis HOM05D005090 ORTHO05D006142 2.5e-50 202.6 178 62.4
Lj5g0006850 Lotus japonicus HOM05D005090 ORTHO05D006142 7.2e-50 201.1 167 64.7
ClCG05G020140 Citrullus lanatus HOM05D005090 ORTHO05D006142 9.4e-50 200.7 175 62.3
Rhsim06G0054600 Rhododendron simsii HOM05D005090 ORTHO05D006142 9.4e-50 200.7 179 59.8
Ca_13273_v3 Cicer arietinum L. HOM05D005090 ORTHO05D006142 3.6e-49 198.7 169 60.9
Actinidia01086 Actinidia chinensis HOM05D005090 ORTHO05D006142 4.7e-49 198.4 175 61.1
Eucgr.F02314 Eucalyptus grandis HOM05D005090 ORTHO05D006142 6.1e-49 198.0 142 69.0
Aqoxy6G01237 Aquilegia oxysepala HOM05D005090 ORTHO05D006142 1.0e-48 197.2 147 68.7
THA.LOC104807114 Tarenaya hassleriana HOM05D005090 ORTHO05D006142 2.3e-48 196.1 173 61.3
Oeu009772.1 Olea europaea HOM05D005090 ORTHO05D006142 3.9e-48 195.3 170 62.9
Sed0019095 Sechium edule HOM05D005090 ORTHO05D006142 3.9e-48 195.3 174 59.8
CANSAT25G3428 Cannabis sativa HOM05D005090 ORTHO05D006142 8.8e-48 194.1 139 73.4
MELO3C016776.2 Cucumis melo HOM05D005090 ORTHO05D006142 8.8e-48 194.1 177 62.1
Nitab4.5_0004730g0030 Nicotiana tabacum HOM05D005090 ORTHO05D006142 1.1e-47 193.7 181 59.1
Nn1g04760 Nelumbo nucifera HOM05D005090 ORTHO05D006142 9.7e-47 190.7 174 60.3
Nitab4.5_0002548g0010 Nicotiana tabacum HOM05D005090 ORTHO05D006142 2.2e-46 189.5 179 56.4
Peaxi162Scf00121g00414 Petunia axillaris HOM05D005090 ORTHO05D006142 2.2e-46 189.5 170 57.1
Hma1.2p1_0634F.1_g193080 Hydrangea macrophylla HOM05D005090 ORTHO05D006142 2.8e-46 189.1 175 57.7
MBI16_g23060_MAGBIO Magnolia biondii HOM05D005090 ORTHO05D006142 2.8e-46 189.1 146 65.8
Sed0001046 Sechium edule HOM05D005090 ORTHO05D006142 3.7e-46 188.7 147 66.7
CANSAT56G0556 Cannabis sativa HOM05D005090 ORTHO05D006142 8.2e-46 187.6 166 63.9
Nn5g30374 Nelumbo nucifera HOM05D005090 ORTHO05D006142 8.2e-46 187.6 171 60.2
Hund05334 Selenicereus undatus HOM05D005090 ORTHO05D006142 1.4e-45 186.8 187 55.1
Aa31LG3G14010 Aethionema arabicum HOM05D005090 ORTHO05D006142 5.3e-45 184.9 145 64.1
AUR62036618 Chenopodium quinoa HOM05D005090 ORTHO05D006142 9.1e-45 184.1 156 63.5
Haze_18058 Corylus avellana HOM05D005090 ORTHO05D006142 9.1e-45 184.1 235 45.5
MSTRG.1060 Avicennia marina HOM05D005090 ORTHO05D006142 1.6e-44 183.3 168 58.9
Psat6g014640 Pisum sativum HOM05D005090 ORTHO05D006142 1.6e-44 183.3 169 58.6
Sc15g0005920 Simmondsia chinensis HOM05D005090 ORTHO05D006142 4.5e-44 181.8 168 58.9
PGSC0003DMG400007949 Solanum tuberosum HOM05D005090 ORTHO05D006142 4.5e-44 181.8 177 56.5
SalBow7G1773 Salvia bowleyana HOM05D005090 ORTHO05D006142 7.7e-44 181.0 169 56.8
Carub.0008s0737 Capsella rubella HOM05D005090 ORTHO05D006142 1.0e-43 180.6 173 54.9
Manes.05G176500 Manihot esculenta HOM05D005090 ORTHO05D006142 1.3e-43 180.3 118 76.3
Hma1.2p1_0360F.1_g135840 Hydrangea macrophylla HOM05D005090 ORTHO05D006142 1.7e-43 179.9 180 56.7
Sopen04g032180 Solanum pennellii HOM05D005090 ORTHO05D006142 2.9e-43 179.1 179 53.1
CAN.G1030.34 Capsicum annuum HOM05D005090 ORTHO05D006142 5.0e-43 178.3 148 59.5
Thhalv10005720m.g Eutrema salsugineum HOM05D005090 ORTHO05D006142 6.5e-43 177.9 171 55.0
Cc10_g04780 Coffea canephora HOM05D005090 ORTHO05D006142 8.5e-43 177.6 172 57.0
EL10As7g23773 Beta vulgaris HOM05D005090 ORTHO05D006142 4.2e-42 175.3 149 62.4
Solyc04g078600.3 Solanum lycopersicum HOM05D005090 ORTHO05D006142 4.2e-42 175.3 183 51.9
BcaC03g17615 Brassica carinata HOM05D005090 ORTHO05D006142 7.2e-42 174.5 172 54.7
BraA02t08700Z Brassica rapa HOM05D005090 ORTHO05D006142 7.2e-42 174.5 156 59.6
BolC2t11671H Brassica oleracea HOM05D005090 ORTHO05D006142 9.4e-42 174.1 173 54.3
HanXRQChr05g0150671 Helianthus annuus HOM05D005090 ORTHO05D006142 9.4e-42 174.1 171 55.6
A06p39530 Brassica napus HOM05D005090 ORTHO05D006142 1.2e-41 173.7 171 53.8
HanXRQChr04g0103471 Helianthus annuus HOM05D005090 ORTHO05D006142 1.2e-41 173.7 170 57.6
AUR62038807 Chenopodium quinoa HOM05D005090 ORTHO05D006142 2.1e-41 172.9 154 60.4
AT5G47830 Arabidopsis thaliana HOM05D005090 ORTHO05D006142 2.7e-41 172.6 169 52.7
A02p37140 Brassica napus HOM05D005090 ORTHO05D006142 2.7e-41 172.6 156 59.0
BraA06t26868Z Brassica rapa HOM05D005090 ORTHO05D006142 2.7e-41 172.6 171 53.8
C02p56140 Brassica napus HOM05D005090 ORTHO05D006142 3.6e-41 172.2 172 54.1
C07p38740 Brassica napus HOM05D005090 ORTHO05D006142 4.7e-41 171.8 171 53.2
BolC7t44393H Brassica oleracea HOM05D005090 ORTHO05D006142 4.7e-41 171.8 171 53.2
DCAR_019423 Daucus carota HOM05D005090 ORTHO05D006142 4.7e-41 171.8 174 55.2
Haze_18064 Corylus avellana HOM05D005090 ORTHO05D006142 8.0e-41 171.0 272 39.7
Lsat_1_v5_gn_1_22101 Lactuca sativa HOM05D005090 ORTHO05D006142 8.0e-41 171.0 185 51.9
Sp2g18330 Schrenkiella parvula HOM05D005090 ORTHO05D006142 8.0e-41 171.0 146 58.2
CARHR184350 Cardamine hirsuta HOM05D005090 ORTHO05D006142 1.8e-40 169.9 173 53.2
ECA246G0692 Erigeron canadensis HOM05D005090 ORTHO05D006142 1.8e-40 169.9 172 52.9
AL8G19800 Arabidopsis lyrata HOM05D005090 ORTHO05D006142 2.3e-40 169.5 168 53.0
PSO541G4295 Papaver somniferum HOM05D005090 ORTHO05D006142 6.7e-40 167.9 180 55.6
MD17G1062600 Malus domestica HOM05D005090 ORTHO05D006142 1.2e-39 167.2 154 64.3
PSO675G4571 Papaver somniferum HOM05D005090 ORTHO05D006142 9.7e-39 164.1 180 53.9
BcaB07g30052 Brassica carinata HOM05D005090 ORTHO05D006142 2.2e-38 162.9 169 52.1
CDE06G1995 Ceratophyllum demersum HOM05D005090 ORTHO05D006142 3.7e-38 162.2 145 56.6
unitig_26.g9810 Utricularia gibba HOM05D005090 ORTHO05D006142 1.1e-37 160.6 165 53.3
ECA247G1795 Erigeron canadensis HOM05D005090 ORTHO05D006142 3.1e-37 159.1 133 60.9
ATR0762G034 Amborella trichopoda HOM05D005090 ORTHO05D006142 4.1e-37 158.7 144 59.0
SEGI_34157 Sequoiadendron giganteum HOM05D005090 ORTHO05D006142 2.0e-36 156.4 142 57.0
Lj4C63T3 Lonicera japonica HOM05D005090 ORTHO05D006142 4.5e-36 155.2 121 66.1
Oeu037620.1 Olea europaea HOM05D005090 ORTHO05D006142 7.7e-36 154.5 118 62.7
Migut.C00536 Erythranthe guttata HOM05D005090 ORTHO05D006142 1.7e-35 153.3 169 50.9
Zm00001eb232600 Zea mays HOM05D005090 ORTHO05D006142 5.0e-35 151.8 142 54.2
Os02g0158600 Oryza sativa ssp. japonica HOM05D005090 ORTHO05D006142 1.1e-34 150.6 142 52.8
SGA_v2.0_scaffold197G41030 Striga asiatica HOM05D005090 ORTHO05D006142 1.2e-31 140.6 234 41.5
TAR628G0694 Trochodendron aralioides HOM05D005090 ORTHO05D006142 1.5e-31 140.2 115 63.5
EL10As7g23770 Beta vulgaris HOM05D005090 ORTHO05D006142 7.5e-31 137.9 151 52.3
BcaB05g23208 Brassica carinata HOM05D005090 ORTHO05D006142 1.7e-30 136.7 124 56.5
CsaV3_4G034590 Cucumis sativus L. HOM05D005090 ORTHO05D006142 8.3e-30 134.4 177 48.6
Pp3c14_4680 Physcomitrium patens HOM05D005090 ORTHO05D006142 1.4e-29 133.7 175 44.6
Pp3c14_4740 Physcomitrium patens HOM05D005090 ORTHO05D006142 1.4e-29 133.7 175 44.6
BcaB04g18280 Brassica carinata HOM05D005090 ORTHO05D006142 7.0e-29 131.3 117 57.3
Nitab4.5_0012973g0030 Nicotiana tabacum HOM05D005090 ORTHO05D006142 2.7e-28 129.4 120 55.0
Pp3c10_3910 Physcomitrium patens HOM05D005090 ORTHO05D006142 1.0e-27 127.5 145 48.3
Mapoly0121s0046 Marchantia polymorpha HOM05D005090 ORTHO05D006142 3.8e-27 125.6 179 41.9
AagrBONN_evm.TU.Sc2ySwM_340.334 Anthoceros agrestis HOM05D005090 ORTHO05D006142 1.5e-26 123.6 138 48.6
EL10As7g23766 Beta vulgaris HOM05D005090 ORTHO05D006142 2.1e-25 119.8 128 54.7
EL10As7g23771 Beta vulgaris HOM05D005090 ORTHO05D006142 2.1e-25 119.8 128 54.7
vmacro04554 Vaccinium macrocarpon HOM05D005090 ORTHO05D006142 3.4e-23 112.5 267 30.7
Sc02g0007470 Simmondsia chinensis HOM05D005090 ORTHO05D006142 1.7e-22 110.2 166 38.6
SMO140G0004 Selaginella moellendorffii HOM05D002426 ORTHO05D002873 1.1e-21 107.5 179 39.7
Nitab4.5_0005621g0060 Nicotiana tabacum HOM05D005090 ORTHO05D006142 1.2e-20 104.0 100 53.0
AUR62044449 Chenopodium quinoa HOM05D005090 ORTHO05D006142 4.5e-20 102.1 119 52.1
BcaB01g00393 Brassica carinata HOM05D005090 ORTHO05D006142 2.8e-17 92.8 103 49.5
MD06G1210300 Malus domestica HOM05D005090 ORTHO05D006142 2.8e-17 92.8 86 58.1
EL10As7g23765 Beta vulgaris HOM05D005090 ORTHO05D006142 2.3e-16 89.7 117 47.9
CBR_g12766 Chara braunii HOM05D005090 ORTHO05D006142 2.6e-15 86.3 168 35.1
BcaC02g09103 Brassica carinata HOM05D005090 ORTHO05D006142 3.6e-09 65.9 83 47.0
Sabra02G0096900 Salix brachista HOM05D005090 ORTHO05D006142 6.2e-09 65.1 58 58.6
C04p38460 Brassica napus HOM05D005090 ORTHO05D006142 8.0e-09 64.7 83 47.0
Sabra02G0096800 Salix brachista HOM05D005090 ORTHO05D006142 1.1e-08 64.3 48 64.6
C02p38970 Brassica napus HOM05D005090 ORTHO05D006142 3.1e-08 62.8 122 38.5
BolC2t09908H Brassica oleracea HOM05D005090 ORTHO05D006142 3.1e-08 62.8 122 38.5
BolC6t37479H Brassica oleracea HOM05D005090 ORTHO05D006142 4.0e-08 62.4 83 45.8
BcaC03g17171 Brassica carinata HOM05D005090 ORTHO05D006142 6.8e-08 61.6 83 45.8
BolC2t11185H Brassica oleracea HOM05D005090 ORTHO05D006142 6.8e-08 61.6 83 45.8


User provided reference genes

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