Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib116G0131 Durio zibethinus HOM05D007581 ORTHO05D009250 1.1e-68 263.5 159 100.0
Gohir.D08G248900 Gossypium hirsutum HOM05D007581 ORTHO05D009250 1.7e-37 159.8 155 69.7
Gorai.004G265500 Gossypium raimondii HOM05D007581 ORTHO05D009250 1.1e-33 147.1 155 65.2
Gohir.A08G228600 Gossypium hirsutum HOM05D007581 ORTHO05D009250 7.3e-33 144.4 155 64.5
CSS0015328 Camellia sinensis var. sinensis HOM05D007581 ORTHO05D009250 1.9e-28 129.8 142 63.4
Peaxi162Scf00078g01222 Petunia axillaris HOM05D007581 ORTHO05D009250 4.6e-27 125.2 142 62.0
EL10Ac1g01297 Beta vulgaris HOM05D007581 ORTHO05D009250 1.9e-25 119.8 154 59.7
GSVIVG01037110001 Vitis vinifera HOM05D007581 ORTHO05D009250 1.9e-25 119.8 138 60.9
Nitab4.5_0000079g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 4.3e-25 118.6 141 60.3
Nitab4.5_0006526g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 5.6e-25 118.2 141 59.6
Aqoxy6G00030 Aquilegia oxysepala HOM05D007581 ORTHO05D009250 1.6e-24 116.7 138 63.0
TWI18G0093 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 1.6e-24 116.7 137 66.4
SGA_v2.0_scaffold118G32651 Striga asiatica HOM05D007581 ORTHO05D009250 2.1e-24 116.3 136 58.8
Phvul.004G128300 Phaseolus vulgaris HOM05D007581 ORTHO05D009250 3.6e-24 115.5 137 62.0
ECA247G3877 Erigeron canadensis HOM05D007581 ORTHO05D009250 1.1e-23 114.0 137 64.2
Sc26g0002080 Simmondsia chinensis HOM05D007581 ORTHO05D009250 2.4e-23 112.8 137 60.6
Thhalv10029062m.g Eutrema salsugineum HOM05D007581 ORTHO05D009250 4.0e-23 112.1 143 60.8
Eucgr.F04100 Eucalyptus grandis HOM05D007581 ORTHO05D009250 5.2e-23 111.7 137 57.7
Aa31LG9G11680 Aethionema arabicum HOM05D007581 ORTHO05D009250 1.5e-22 110.2 136 61.0
FAN19G1324 Fragaria x ananassa HOM05D007581 ORTHO05D009250 3.4e-22 109.0 142 59.2
Manes.15G183800 Manihot esculenta HOM05D007581 ORTHO05D009250 3.4e-22 109.0 137 55.5
Haze_14032 Corylus avellana HOM05D007581 ORTHO05D009250 4.4e-22 108.6 143 60.1
COL.COLO4_25109 Corchorus olitorius HOM05D007581 ORTHO05D009250 5.8e-22 108.2 119 67.2
AT4G10330 Arabidopsis thaliana HOM05D007581 ORTHO05D009250 9.9e-22 107.5 143 57.3
CAN.G630.61 Capsicum annuum HOM05D007581 ORTHO05D009250 9.9e-22 107.5 142 59.2
Potri.019G063300 Populus trichocarpa HOM05D007581 ORTHO05D009250 9.9e-22 107.5 151 55.6
Sp6g07100 Schrenkiella parvula HOM05D007581 ORTHO05D009250 9.9e-22 107.5 144 60.4
Glyma.16G205300 Glycine max HOM05D007581 ORTHO05D009250 1.3e-21 107.1 137 59.9
Dinv37395 Davidia involucrata HOM05D007581 ORTHO05D009250 2.2e-21 106.3 136 64.0
Atru.chr13.2628 Acer truncatum HOM05D007581 ORTHO05D009250 2.9e-21 105.9 153 52.3
CiPaw.04G007300 Carya illinoinensis HOM05D007581 ORTHO05D009250 2.9e-21 105.9 136 58.1
FAN24G1736 Fragaria x ananassa HOM05D007581 ORTHO05D009250 3.8e-21 105.5 143 60.1
Medtr6g060172 Medicago truncatula HOM05D007581 ORTHO05D009250 3.8e-21 105.5 143 53.1
PSO210G2853 Papaver somniferum HOM05D007581 ORTHO05D009250 3.8e-21 105.5 152 53.9
FvH4_2g00130 Fragaria vesca HOM05D007581 ORTHO05D009250 4.9e-21 105.1 164 55.5
BolC2t10277H Brassica oleracea HOM05D007581 ORTHO05D009250 6.4e-21 104.8 147 54.4
Lj2g0009073 Lotus japonicus HOM05D007581 ORTHO05D009250 6.4e-21 104.8 142 59.9
ClCG08G001940 Citrullus lanatus HOM05D007581 ORTHO05D009250 4.2e-20 102.1 152 51.3
BcaB05g23909 Brassica carinata HOM05D007581 ORTHO05D009250 5.4e-20 101.7 143 51.7
Prupe.8G001100 Prunus persica HOM05D007581 ORTHO05D009250 5.4e-20 101.7 164 49.4
PGSC0003DMG400016228 Solanum tuberosum HOM05D007581 ORTHO05D009250 7.1e-20 101.3 136 57.4
MD00G1103300 Malus domestica HOM05D007581 ORTHO05D009250 6.0e-19 98.2 144 49.3
Sed0022412 Sechium edule HOM05D007581 ORTHO05D009250 1.3e-18 97.1 151 51.0
Sopen11g004800 Solanum pennellii HOM05D007581 ORTHO05D009250 1.7e-18 96.7 136 55.9
Sabra19G0076500 Salix brachista HOM05D007581 ORTHO05D009250 2.3e-18 96.3 151 51.0
Sabra19G0080300 Salix brachista HOM05D007581 ORTHO05D009250 2.3e-18 96.3 151 51.0
Lalb_Chr02g0149891 Lupinus albus HOM05D007581 ORTHO05D009250 3.0e-18 95.9 136 60.3
Cc10_g16220 Coffea canephora HOM05D007581 ORTHO05D009250 3.9e-18 95.5 134 59.7
TAR628G1203 Trochodendron aralioides HOM05D007581 ORTHO05D009250 5.1e-18 95.1 151 54.3
CANSAT25G1375 Cannabis sativa HOM05D007581 ORTHO05D009250 6.6e-18 94.7 142 50.0
CANSAT25G2017 Cannabis sativa HOM05D007581 ORTHO05D009250 6.6e-18 94.7 142 50.0
BcaC03g16403 Brassica carinata HOM05D007581 ORTHO05D009250 1.5e-17 93.6 147 51.7
C02p42350 Brassica napus HOM05D007581 ORTHO05D009250 1.5e-17 93.6 147 51.7
A02p26660 Brassica napus HOM05D007581 ORTHO05D009250 1.9e-17 93.2 143 51.0
BraA02t07670Z Brassica rapa HOM05D007581 ORTHO05D009250 1.9e-17 93.2 143 51.0
Solyc11g009030.1 Solanum lycopersicum HOM05D007581 ORTHO05D009250 1.9e-17 93.2 135 56.3
Glyma.09G154800 Glycine max HOM05D007581 ORTHO05D009250 2.5e-17 92.8 137 53.3
Cpa.g.sc21.238 Carica papaya HOM05D007581 ORTHO05D009250 3.3e-17 92.4 94 70.2
DCAR_014049 Daucus carota HOM05D000133 ORTHO05D000259 3.3e-17 92.4 157 53.5
Migut.C01409 Erythranthe guttata HOM05D007581 ORTHO05D009250 2.8e-16 89.4 143 49.7
MELO3C022112.2 Cucumis melo HOM05D007581 ORTHO05D009250 3.6e-16 89.0 153 49.7
MBI06_g43033_MAGBIO Magnolia biondii HOM05D007581 ORTHO05D009250 3.6e-16 89.0 137 54.0
Lsat_1_v5_gn_1_24761 Lactuca sativa HOM05D007581 ORTHO05D009250 6.2e-16 88.2 136 52.2
QL09p000889 Quercus lobata HOM05D007581 ORTHO05D009250 1.4e-15 87.0 136 52.2
MSTRG.25512 Avicennia marina HOM05D007581 ORTHO05D009250 1.8e-15 86.7 136 50.0
Psat1g111920 Pisum sativum HOM05D007581 ORTHO05D009250 2.4e-15 86.3 127 53.5
Carub.0006s2893 Capsella rubella HOM05D007581 ORTHO05D009250 3.1e-15 85.9 140 47.9
CsaV3_5G039340 Cucumis sativus L. HOM05D007581 ORTHO05D009250 3.1e-15 85.9 153 47.7
Lalb_Chr01g0008751 Lupinus albus HOM05D007581 ORTHO05D009250 3.1e-15 85.9 138 50.7
Hund16921 Selenicereus undatus HOM05D007581 ORTHO05D009250 3.1e-15 85.9 151 49.7
THA.LOC104815611 Tarenaya hassleriana HOM05D007581 ORTHO05D009250 3.1e-15 85.9 142 47.9
CARHR256310 Cardamine hirsuta HOM05D007581 ORTHO05D009250 9.0e-15 84.3 151 48.3
Ciclev10022815m.g Citrus clementina HOM05D007581 ORTHO05D009250 1.2e-14 84.0 143 50.3
Nn5g27166 Nelumbo nucifera HOM05D007581 ORTHO05D009250 1.2e-14 84.0 138 50.7
Ca_02136_v3 Cicer arietinum L. HOM05D007581 ORTHO05D009250 1.5e-14 83.6 143 50.3
AL6G44200 Arabidopsis lyrata HOM05D007581 ORTHO05D009250 2.6e-14 82.8 140 47.9
ATR1089G122 Amborella trichopoda HOM05D007581 ORTHO05D009250 9.9e-14 80.9 137 50.4
RcHm_v2.0_Chr6g0249391 Rosa chinensis HOM05D007581 ORTHO05D009250 2.2e-13 79.7 142 50.0
Os01g0886500 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 2.9e-13 79.3 131 48.9
HPP92_009197 Vanilla planifolia HOM05D007581 ORTHO05D009250 3.8e-13 79.0 136 52.2
TPR.G20128 Trifolium pratense HOM05D007581 ORTHO05D009250 4.2e-12 75.5 138 50.0
MD05G1000400 Malus domestica HOM05D007581 ORTHO05D009250 2.1e-11 73.2 109 57.8
AUR62013400 Chenopodium quinoa HOM05D007581 ORTHO05D009250 2.7e-11 72.8 170 38.2
PSO761G0508 Papaver somniferum HOM05D007581 ORTHO05D009250 6.0e-11 71.6 110 52.7
Os11g0242700 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 1.0e-10 70.9 147 43.5
VMungo0464G1076 Vigna mungo HOM05D007581 ORTHO05D009250 3.9e-10 68.9 125 55.2
Thecc.08G167500 Theobroma cacao HOM05D007581 ORTHO05D009250 6.6e-10 68.2 77 54.5
TWI75G0477 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 1.9e-09 66.6 106 62.3
Zm00001eb145430 Zea mays HOM05D007581 ORTHO05D009250 2.5e-09 66.2 135 44.4
Zm00001eb168090 Zea mays HOM05D007581 ORTHO05D009250 7.3e-09 64.7 154 41.6
Oeu028611.1 Olea europaea HOM05D007581 ORTHO05D009250 4.8e-08 62.0 104 51.0
MD02G1202800 Malus domestica HOM05D007581 ORTHO05D009250 1.8e-07 60.1 110 49.1
AUR62038551 Chenopodium quinoa HOM05D007581 ORTHO05D009250 4.0e-07 58.9 138 33.3
HanXRQChr04g0102981 Helianthus annuus HOM05D007581 ORTHO05D009250 9.0e-07 57.8 98 53.1
unitig_578.g16109 Utricularia gibba HOM05D007581 ORTHO05D009250 2.6e-06 56.2 137 43.1
Cfa008025 Carpinus fangiana HOM05D007581 ORTHO05D009250 7.6e-06 54.7 33 72.7
Dinv25473 Davidia involucrata HOM05D007581 ORTHO05D009250 9.9e-06 54.3 59 45.8


User provided reference genes

Program Settings