Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib093G2129 Durio zibethinus HOM05D004402 ORTHO05D005314 7.7e-302 1039.6 509 100.0
Gorai.009G414300 Gossypium raimondii HOM05D004402 ORTHO05D005314 7.2e-276 953.4 509 91.2
Gohir.D04G110200 Gossypium hirsutum HOM05D004402 ORTHO05D005314 6.1e-275 950.3 509 91.0
Thecc.05G068900 Theobroma cacao HOM05D004402 ORTHO05D005314 3.0e-274 948.0 509 91.4
COL.COLO4_09330 Corchorus olitorius HOM05D004402 ORTHO05D005314 1.0e-266 922.9 506 89.5
COL.COLO4_26944 Corchorus olitorius HOM05D004402 ORTHO05D005314 1.2e-254 882.9 477 90.1
Dinv35795 Davidia involucrata HOM05D004402 ORTHO05D005314 1.2e-246 856.3 514 82.7
QL07p043056 Quercus lobata HOM05D004402 ORTHO05D005314 5.1e-245 850.9 509 81.7
Potri.006G123000 Populus trichocarpa HOM05D004402 ORTHO05D005314 6.6e-245 850.5 509 82.3
Sabra06G0097300 Salix brachista HOM05D004402 ORTHO05D005314 6.6e-245 850.5 509 81.9
GSVIVG01033653001 Vitis vinifera HOM05D004402 ORTHO05D005314 1.5e-244 849.4 515 81.2
Atru.chr8.1786 Acer truncatum HOM05D004402 ORTHO05D005314 2.8e-243 845.1 507 81.7
Cfa017631 Carpinus fangiana HOM05D004402 ORTHO05D005314 7.6e-241 837.0 510 80.4
CSS0044786 Camellia sinensis var. sinensis HOM05D004402 ORTHO05D005314 2.9e-240 835.1 514 80.7
Prupe.7G128300 Prunus persica HOM05D004402 ORTHO05D005314 4.9e-240 834.3 509 80.9
Ciclev10011527m.g Citrus clementina HOM05D004402 ORTHO05D005314 2.7e-238 828.6 509 81.1
CiPaw.10G128900 Carya illinoinensis HOM05D004402 ORTHO05D005314 3.0e-237 825.1 509 79.4
CANSAT80G1177 Cannabis sativa HOM05D004402 ORTHO05D005314 2.1e-235 818.9 509 78.4
vmacro01673 Vaccinium macrocarpon HOM05D004402 ORTHO05D005314 4.7e-235 817.8 548 74.6
FvH4_6g16530 Fragaria vesca HOM05D004402 ORTHO05D005314 6.2e-235 817.4 509 79.2
RcHm_v2.0_Chr3g0470441 Rosa chinensis HOM05D004402 ORTHO05D005314 8.1e-235 817.0 509 79.4
THA.LOC104823232 Tarenaya hassleriana HOM05D004402 ORTHO05D005314 2.6e-233 812.0 509 77.4
Glyma.19G184800 Glycine max HOM05D004402 ORTHO05D005314 5.8e-233 810.8 509 77.8
Nn6g35264 Nelumbo nucifera HOM05D004402 ORTHO05D005314 2.9e-232 808.5 513 78.0
Phvul.001G179700 Phaseolus vulgaris HOM05D004402 ORTHO05D005314 1.1e-231 806.6 509 77.0
Lj1g0000599 Lotus japonicus HOM05D004402 ORTHO05D005314 1.9e-231 805.8 509 77.0
Lalb_Chr20g0112571 Lupinus albus HOM05D004402 ORTHO05D005314 4.2e-231 804.7 509 77.2
TAR633G1938 Trochodendron aralioides HOM05D004402 ORTHO05D005314 1.2e-230 803.1 513 77.8
Glyma.03G184200 Glycine max HOM05D004402 ORTHO05D005314 4.6e-230 801.2 509 76.4
TWI74G0242 Tripterygium wilfordii HOM05D004402 ORTHO05D005314 4.6e-230 801.2 511 78.7
Cc06_g04350 Coffea canephora HOM05D004402 ORTHO05D005314 6.0e-230 800.8 514 76.3
Lalb_Chr25g0288951 Lupinus albus HOM05D004402 ORTHO05D005314 5.1e-229 797.7 509 76.0
ClCG10G020050 Citrullus lanatus HOM05D004402 ORTHO05D005314 1.9e-228 795.8 509 75.6
CsaV3_3G036050 Cucumis sativus L. HOM05D004402 ORTHO05D005314 3.3e-228 795.0 509 75.6
Ca_08910_v3 Cicer arietinum L. HOM05D004402 ORTHO05D005314 3.6e-227 791.6 509 76.4
BraA10t45293Z Brassica rapa HOM05D004402 ORTHO05D005314 4.8e-227 791.2 509 76.2
TWI77G0706 Tripterygium wilfordii HOM05D004402 ORTHO05D005314 6.2e-227 790.8 508 77.4
Aa31LG1G21720 Aethionema arabicum HOM05D004402 ORTHO05D005314 4.0e-226 788.1 504 76.6
BcaB01g05821 Brassica carinata HOM05D004402 ORTHO05D005314 4.0e-226 788.1 509 75.8
A10p32580 Brassica napus HOM05D004402 ORTHO05D005314 5.3e-226 787.7 509 75.6
BcaC06g32061 Brassica carinata HOM05D004402 ORTHO05D005314 6.9e-226 787.3 510 75.7
BolC9t60074H Brassica oleracea HOM05D004402 ORTHO05D005314 6.9e-226 787.3 510 75.7
THA.LOC104826918 Tarenaya hassleriana HOM05D004402 ORTHO05D005314 2.0e-225 785.8 510 75.7
Medtr7g102180 Medicago truncatula HOM05D004402 ORTHO05D005314 2.6e-225 785.4 509 75.6
C09p73380 Brassica napus HOM05D004402 ORTHO05D005314 4.5e-225 784.6 510 75.7
Carub.0006s0224 Capsella rubella HOM05D004402 ORTHO05D005314 5.8e-225 784.3 509 75.6
Thhalv10013303m.g Eutrema salsugineum HOM05D004402 ORTHO05D005314 5.8e-225 784.3 517 74.7
Oeu041487.1 Olea europaea HOM05D004402 ORTHO05D005314 7.6e-225 783.9 514 76.1
Manes.12G084800 Manihot esculenta HOM05D004402 ORTHO05D005314 9.9e-225 783.5 510 76.3
BcaC06g32058 Brassica carinata HOM05D004402 ORTHO05D005314 2.2e-224 782.3 509 75.2
TAR636G0918 Trochodendron aralioides HOM05D004402 ORTHO05D005314 2.9e-224 781.9 489 79.1
AL6G12780 Arabidopsis lyrata HOM05D004402 ORTHO05D005314 8.4e-224 780.4 509 75.4
AT5G03430 Arabidopsis thaliana HOM05D004402 ORTHO05D005314 1.1e-223 780.0 509 75.4
BolC2t06097H Brassica oleracea HOM05D004402 ORTHO05D005314 1.1e-223 780.0 511 75.7
Nitab4.5_0000578g0080 Nicotiana tabacum HOM05D004402 ORTHO05D005314 1.1e-223 780.0 514 74.7
BraA02t04760Z Brassica rapa HOM05D004402 ORTHO05D005314 1.9e-223 779.2 513 75.0
BcaB01g05839 Brassica carinata HOM05D004402 ORTHO05D005314 2.4e-223 778.9 509 75.6
C03p01510 Brassica napus HOM05D004402 ORTHO05D005314 2.4e-223 778.9 509 75.8
MD12G1109700 Malus domestica HOM05D004402 ORTHO05D005314 2.4e-223 778.9 476 80.3
arahy.Tifrunner.gnm1.ann1.DYK8MJ Arachis hypogaea HOM05D004402 ORTHO05D005314 3.2e-223 778.5 547 70.7
arahy.Tifrunner.gnm1.ann1.ZWC5L9 Arachis hypogaea HOM05D004402 ORTHO05D005314 7.1e-223 777.3 547 70.6
vmacro07301 Vaccinium macrocarpon HOM05D004402 ORTHO05D005314 7.1e-223 777.3 601 67.4
Sopen10g033410 Solanum pennellii HOM05D004402 ORTHO05D005314 1.2e-222 776.5 513 75.4
A03p01170 Brassica napus HOM05D004402 ORTHO05D005314 1.6e-222 776.2 509 75.0
CARHR209910 Cardamine hirsuta HOM05D004402 ORTHO05D005314 1.6e-222 776.2 509 74.7
C02p01070 Brassica napus HOM05D004402 ORTHO05D005314 2.1e-222 775.8 511 75.3
BolC3t12705H Brassica oleracea HOM05D004402 ORTHO05D005314 2.1e-222 775.8 509 75.4
Sp6g39310 Schrenkiella parvula HOM05D004402 ORTHO05D005314 3.5e-222 775.0 507 75.3
Lj2C120T4 Lonicera japonica HOM05D004402 ORTHO05D005314 7.9e-222 773.9 472 81.4
MSTRG.10328 Avicennia marina HOM05D004402 ORTHO05D005314 3.0e-221 771.9 514 75.7
MD04G1091700 Malus domestica HOM05D004402 ORTHO05D005314 3.9e-221 771.5 474 79.3
PGR004G2373 Punica granatum HOM05D004402 ORTHO05D005314 5.1e-221 771.2 506 75.1
Sopen09g003130 Solanum pennellii HOM05D004402 ORTHO05D005314 8.7e-221 770.4 514 73.9
Sed0020729 Sechium edule HOM05D004402 ORTHO05D005314 1.1e-220 770.0 509 74.3
Solyc09g008310.3 Solanum lycopersicum HOM05D004402 ORTHO05D005314 2.5e-220 768.8 514 73.5
DCAR_015004 Daucus carota HOM05D004402 ORTHO05D005314 5.6e-220 767.7 514 74.7
Peaxi162Scf00311g01314 Petunia axillaris HOM05D004402 ORTHO05D005314 9.6e-220 766.9 510 74.5
Nn2g13812 Nelumbo nucifera HOM05D004402 ORTHO05D005314 3.7e-219 765.0 514 74.5
Sc20g0005590 Simmondsia chinensis HOM05D004402 ORTHO05D005314 6.2e-219 764.2 514 72.8
HanXRQChr14g0454821 Helianthus annuus HOM05D004402 ORTHO05D005314 9.0e-218 760.4 507 73.4
CAN.G488.15 Capsicum annuum HOM05D004402 ORTHO05D005314 1.2e-217 760.0 514 73.5
PSO801G0054 Papaver somniferum HOM05D004402 ORTHO05D005314 1.5e-217 759.6 513 72.5
FAN14G0478 Fragaria x ananassa HOM05D004402 ORTHO05D005314 2.6e-217 758.8 509 75.0
Migut.L01711 Erythranthe guttata HOM05D004402 ORTHO05D005314 8.4e-216 753.8 511 74.4
PSO339G5499 Papaver somniferum HOM05D004402 ORTHO05D005314 8.4e-216 753.8 514 72.2
FAN09G4748 Fragaria x ananassa HOM05D004402 ORTHO05D005314 1.1e-215 753.4 509 74.7
SalBow2G1223 Salvia bowleyana HOM05D004402 ORTHO05D005314 1.4e-215 753.1 504 74.6
SalBow3G3127 Salvia bowleyana HOM05D004402 ORTHO05D005314 3.2e-215 751.9 504 74.6
BraA03t09499Z Brassica rapa HOM05D004402 ORTHO05D005314 3.5e-214 748.4 483 76.2
DCAR_017670 Daucus carota HOM05D004402 ORTHO05D005314 1.8e-213 746.1 508 73.8
Dinv37323 Davidia involucrata HOM05D004402 ORTHO05D005314 5.1e-213 744.6 452 82.5
Solyc10g083960.2 Solanum lycopersicum HOM05D004402 ORTHO05D005314 1.9e-212 742.7 513 73.1
MBI17_g34762_MAGBIO Magnolia biondii HOM05D004402 ORTHO05D005314 9.6e-212 740.3 527 70.2
MELO3C009365.2 Cucumis melo HOM05D004402 ORTHO05D005314 1.3e-211 740.0 509 72.1
Eucgr.K02925 Eucalyptus grandis HOM05D004402 ORTHO05D005314 1.3e-211 740.0 510 72.2
ATR0910G004 Amborella trichopoda HOM05D004402 ORTHO05D005314 4.8e-211 738.0 513 70.8
AUR62026916 Chenopodium quinoa HOM05D004402 ORTHO05D005314 2.6e-209 732.3 513 70.6
Rhsim03G0090600 Rhododendron simsii HOM05D004402 ORTHO05D005314 4.5e-209 731.5 567 67.4
ECA238G0572 Erigeron canadensis HOM05D004402 ORTHO05D005314 1.7e-208 729.6 507 71.2
VMungo1383G0058 Vigna mungo HOM05D004402 ORTHO05D005314 2.5e-207 725.7 460 76.7
FAN05G1679 Fragaria x ananassa HOM05D004402 ORTHO05D005314 1.2e-206 723.4 509 72.7
FAN05G2520 Fragaria x ananassa HOM05D004402 ORTHO05D005314 1.6e-206 723.0 509 72.7
BcaB05g21840 Brassica carinata HOM05D004402 ORTHO05D005314 4.6e-206 721.5 499 71.1
FAN02G2572 Fragaria x ananassa HOM05D004402 ORTHO05D005314 2.4e-202 709.1 535 69.3
CDE10G0806 Ceratophyllum demersum HOM05D004402 ORTHO05D005314 3.1e-202 708.8 512 68.8
Oeu005028.1 Olea europaea HOM05D004402 ORTHO05D005314 1.2e-201 706.8 526 69.8
EL10Ac7g16646 Beta vulgaris HOM05D004402 ORTHO05D005314 1.3e-200 703.4 588 62.4
Actinidia28911 Actinidia chinensis HOM05D004402 ORTHO05D005314 1.6e-198 696.4 473 73.8
AUR62042064 Chenopodium quinoa HOM05D004402 ORTHO05D005314 2.1e-198 696.0 513 68.2
Nitab4.5_0000063g0160 Nicotiana tabacum HOM05D004402 ORTHO05D005314 6.7e-197 691.0 512 68.9
Nitab4.5_0000814g0100 Nicotiana tabacum HOM05D004402 ORTHO05D005314 1.1e-196 690.3 513 69.0
BcaC03g13007 Brassica carinata HOM05D004402 ORTHO05D005314 1.5e-196 689.9 452 75.2
Psat3g041880 Pisum sativum HOM05D004402 ORTHO05D005314 1.9e-196 689.5 449 75.9
Peaxi162Scf00722g00015 Petunia axillaris HOM05D004402 ORTHO05D005314 4.3e-196 688.3 514 68.3
Nitab4.5_0010955g0010 Nicotiana tabacum HOM05D004402 ORTHO05D005314 1.4e-194 683.3 528 66.9
Ah.08g211550 Amaranthus hybridus HOM05D004402 ORTHO05D005314 4.1e-194 681.8 512 66.8
SGA_v2.0_scaffold75G24834 Striga asiatica HOM05D004402 ORTHO05D005314 6.9e-194 681.0 513 69.2
Zm00001eb333440 Zea mays HOM05D004402 ORTHO05D005314 9.1e-194 680.6 510 65.1
Lsat_1_v5_gn_1_51600 Lactuca sativa HOM05D004402 ORTHO05D005314 3.4e-193 678.7 499 68.7
ECA248G3038 Erigeron canadensis HOM05D004402 ORTHO05D005314 1.0e-192 677.2 502 67.5
HPP92_025807 Vanilla planifolia HOM05D004402 ORTHO05D005314 7.9e-190 667.5 512 66.0
unitig_60.g25815 Utricularia gibba HOM05D004402 ORTHO05D005314 2.2e-184 649.4 509 65.4
CAN.G900.21 Capsicum annuum HOM05D004402 ORTHO05D005314 1.9e-175 619.8 404 74.5
Migut.J00646 Erythranthe guttata HOM05D004402 ORTHO05D005314 6.7e-173 611.3 404 74.8
Haze_20522 Corylus avellana HOM05D004402 ORTHO05D005314 2.6e-164 582.8 479 64.3
Hund20335 Selenicereus undatus HOM05D004402 ORTHO05D005314 1.6e-161 573.5 664 49.8
Mapoly0054s0056 Marchantia polymorpha HOM05D004402 ORTHO05D005314 1.2e-158 563.9 546 54.2
AagrBONN_evm.TU.Sc2ySwM_362.2690 Anthoceros agrestis HOM05D004402 ORTHO05D005314 4.7e-158 562.0 533 55.0
SHI12325 Sapria himalayana HOM05D004402 ORTHO05D005314 4.1e-146 522.3 453 60.9
SMO146G0130 Selaginella moellendorffii HOM05D004402 ORTHO05D005314 1.2e-145 520.8 417 61.9
Gohir.A04G071600 Gossypium hirsutum HOM05D004402 ORTHO05D005314 4.6e-145 518.8 270 93.7
TPR.G32815 Trifolium pratense HOM05D004402 ORTHO05D005314 2.7e-137 493.0 341 71.6
SGA_v2.0_scaffold224G42938 Striga asiatica HOM05D004402 ORTHO05D005314 2.3e-133 479.9 509 53.2
PGSC0003DMG401028184 Solanum tuberosum HOM05D004402 ORTHO05D005314 1.3e-120 437.6 273 78.8
Aqoxy3G01670 Aquilegia oxysepala HOM05D004402 ORTHO05D005314 1.1e-111 407.9 279 73.1
Gohir.A04G071700 Gossypium hirsutum HOM05D004402 ORTHO05D005314 2.4e-106 390.2 214 88.3
SEGI_14784 Sequoiadendron giganteum HOM05D004402 ORTHO05D005314 2.3e-88 330.5 243 69.1
Zm00001eb128460 Zea mays HOM05D004402 ORTHO05D005314 3.7e-86 323.2 241 65.1
Hma1.2p1_0828F.1_g225130 Hydrangea macrophylla HOM05D004402 ORTHO05D005314 1.5e-84 317.8 219 74.0
Zm00001eb127890 Zea mays HOM05D004402 ORTHO05D005314 5.0e-83 312.8 257 61.5
HanXRQChr07g0194721 Helianthus annuus HOM05D004402 ORTHO05D005314 8.5e-75 285.4 503 39.2
Cre13.g592500 Chlamydomonas reinhardtii HOM05D004402 ORTHO05D005314 2.0e-68 264.2 566 31.6
PRCOL_00001257 Prasinoderma coloniale HOM05D004402 ORTHO05D005314 7.2e-58 229.2 392 36.7
TAR636G0069 Trochodendron aralioides HOM05D004402 ORTHO05D005314 1.1e-45 188.7 188 53.2
Os01g0259600 Oryza sativa ssp. japonica HOM05D004402 ORTHO05D005314 2.3e-43 181.0 135 63.7
TAR636G0130 Trochodendron aralioides HOM05D004402 ORTHO05D005314 1.6e-41 174.9 121 72.7
VMungo1383G2351 Vigna mungo HOM05D004402 ORTHO05D005314 1.0e-40 172.2 106 80.2
PGSC0003DMG400003892 Solanum tuberosum HOM05D004402 ORTHO05D005314 2.8e-38 164.1 114 65.8
PRCOL_00006213 Prasinoderma coloniale HOM05D004402 ORTHO05D005314 2.3e-35 154.5 211 39.8
SalBow3G0082 Salvia bowleyana HOM05D004402 ORTHO05D005314 9.8e-31 139.0 249 39.8
SalBow3G2408 Salvia bowleyana HOM05D004402 ORTHO05D005314 2.9e-30 137.5 249 39.4
TPR.G11110 Trifolium pratense HOM05D004402 ORTHO05D005314 5.4e-29 133.3 68 89.7
SalBow3G1023 Salvia bowleyana HOM05D004402 ORTHO05D005314 6.8e-24 116.3 63 87.3
HanXRQChr13g0396631 Helianthus annuus HOM05D004402 ORTHO05D005314 1.6e-17 95.1 73 65.8
Cfa022272 Carpinus fangiana HOM05D004402 ORTHO05D005314 1.1e-16 92.4 166 28.9
CBR_g4033 Chara braunii HOM05D004402 ORTHO05D005314 8.3e-14 82.8 114 44.7
Lsat_1_v5_gn_6_17200 Lactuca sativa HOM05D004402 ORTHO05D005314 1.0e-11 75.9 86 47.7
CAN.G900.20 Capsicum annuum HOM05D004402 ORTHO05D005314 1.3e-11 75.5 61 63.9
Cre01.g026650 Chlamydomonas reinhardtii HOM05D004402 ORTHO05D007141 8.6e-11 72.8 240 26.2
SEGI_37303 Sequoiadendron giganteum HOM05D004402 ORTHO05D005314 3.6e-09 67.4 74 47.3
Cfa025539 Carpinus fangiana HOM05D003439 ORTHO05D004062 1.1e-08 65.9 133 27.8
TAR636G1582 Trochodendron aralioides HOM05D004402 ORTHO05D005314 1.1e-08 65.9 36 86.1
CBR_g4032 Chara braunii HOM05D004402 ORTHO05D043925 3.4e-07 60.8 36 75.0
ECA233G2956 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.4e-07 60.8 105 41.0


User provided reference genes

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