Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib093G2110 Durio zibethinus HOM05D007221 ORTHO05D009204 3.7e-64 248.1 127 100.0
Thecc.08G027100 Theobroma cacao HOM05D007221 ORTHO05D009204 3.1e-34 148.7 91 85.7
Gohir.D01G104000 Gossypium hirsutum HOM05D007221 ORTHO05D009204 6.9e-34 147.5 91 85.7
Gohir.A01G115700 Gossypium hirsutum HOM05D007221 ORTHO05D009204 9.9e-33 143.7 91 84.6
COL.COLO4_26312 Corchorus olitorius HOM05D007221 ORTHO05D009204 3.8e-32 141.7 91 81.3
Gorai.002G127900 Gossypium raimondii HOM05D007221 ORTHO05D009204 1.4e-31 139.8 100 78.0
TAR625G0916 Trochodendron aralioides HOM05D007221 ORTHO05D009204 3.5e-30 135.2 126 59.5
Prupe.1G379100 Prunus persica HOM05D007221 ORTHO05D009204 8.7e-29 130.6 91 72.5
MD08G1031600 Malus domestica HOM05D007221 ORTHO05D009204 2.5e-28 129.0 91 71.4
Potri.014G196800 Populus trichocarpa HOM05D007221 ORTHO05D009204 4.3e-28 128.3 91 72.5
GSVIVG01009712001 Vitis vinifera HOM05D007221 ORTHO05D009204 4.3e-28 128.3 91 70.3
RcHm_v2.0_Chr6g0301081 Rosa chinensis HOM05D007221 ORTHO05D009204 5.6e-28 127.9 91 70.3
MD15G1027300 Malus domestica HOM05D007221 ORTHO05D009204 7.4e-28 127.5 91 69.2
FvH4_2g39780 Fragaria vesca HOM05D007221 ORTHO05D009204 3.7e-27 125.2 91 70.3
CiPaw.15G078400 Carya illinoinensis HOM05D007221 ORTHO05D009204 8.2e-27 124.0 91 70.3
PSO675G7833 Papaver somniferum HOM05D007221 ORTHO05D009204 2.4e-26 122.5 89 67.4
Aqoxy6G01112 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 3.1e-26 122.1 91 67.0
FAN27G1052 Fragaria x ananassa HOM05D007221 ORTHO05D009204 3.1e-26 122.1 91 69.2
Sabra14G0145300 Salix brachista HOM05D007221 ORTHO05D009204 3.1e-26 122.1 91 70.3
MELO3C010945.2 Cucumis melo HOM05D007221 ORTHO05D009204 4.0e-26 121.7 88 70.5
MBI16_g31006_MAGBIO Magnolia biondii HOM05D007221 ORTHO05D009204 4.0e-26 121.7 92 68.5
QL02p008631 Quercus lobata HOM05D007221 ORTHO05D009204 4.0e-26 121.7 89 69.7
Rhsim07G0239500 Rhododendron simsii HOM05D007221 ORTHO05D009204 4.0e-26 121.7 88 68.2
Sopen04g033980 Solanum pennellii HOM05D007221 ORTHO05D009204 9.0e-26 120.6 82 74.4
CsaV3_2G028730 Cucumis sativus L. HOM05D007221 ORTHO05D009204 1.2e-25 120.2 88 68.2
Hma1.2p1_0203F.1_g086350 Hydrangea macrophylla HOM05D007221 ORTHO05D009204 1.2e-25 120.2 128 55.5
Lj4A39T64 Lonicera japonica HOM05D007221 ORTHO05D009204 1.2e-25 120.2 80 73.8
Solyc04g080390.4 Solanum lycopersicum HOM05D007221 ORTHO05D009204 1.2e-25 120.2 82 74.4
PGSC0003DMG400003731 Solanum tuberosum HOM05D007221 ORTHO05D009204 1.2e-25 120.2 82 73.2
Ciclev10002305m.g Citrus clementina HOM05D007221 ORTHO05D009204 1.5e-25 119.8 91 65.9
Eucgr.F01893 Eucalyptus grandis HOM05D007221 ORTHO05D009204 2.0e-25 119.4 89 69.7
PGR031G1076 Punica granatum HOM05D007221 ORTHO05D009204 3.4e-25 118.6 91 69.2
unitig_26.g9834 Utricularia gibba HOM05D007221 ORTHO05D009204 4.5e-25 118.2 91 67.0
FAN20G2979 Fragaria x ananassa HOM05D007221 ORTHO05D009204 5.8e-25 117.9 91 68.1
Ca_15515_v3 Cicer arietinum L. HOM05D007221 ORTHO05D009204 7.6e-25 117.5 89 65.2
Nitab4.5_0006280g0040 Nicotiana tabacum HOM05D007221 ORTHO05D009204 7.6e-25 117.5 90 67.8
Nitab4.5_0010510g0010 Nicotiana tabacum HOM05D007221 ORTHO05D009204 7.6e-25 117.5 90 67.8
CANSAT25G0501 Cannabis sativa HOM05D007221 ORTHO05D009204 1.0e-24 117.1 89 67.4
CAN.G1226.17 Capsicum annuum HOM05D007221 ORTHO05D009204 1.0e-24 117.1 82 69.5
Peaxi162Scf00417g01337 Petunia axillaris HOM05D007221 ORTHO05D009204 1.3e-24 116.7 90 65.6
Sed0005529 Sechium edule HOM05D007221 ORTHO05D009204 1.3e-24 116.7 88 68.2
Medtr3g111850 Medicago truncatula HOM05D007221 ORTHO05D009204 3.8e-24 115.2 89 64.0
Glyma.06G032000 Glycine max HOM05D007221 ORTHO05D009204 4.9e-24 114.8 82 67.1
HanXRQChr16g0508501 Helianthus annuus HOM05D007221 ORTHO05D009204 4.9e-24 114.8 88 65.9
TPR.G12470 Trifolium pratense HOM05D007221 ORTHO05D009204 4.9e-24 114.8 89 62.9
Sc02g0006170 Simmondsia chinensis HOM05D007221 ORTHO05D009204 6.5e-24 114.4 91 62.6
Migut.C00733 Erythranthe guttata HOM05D007221 ORTHO05D009204 8.4e-24 114.0 88 64.8
Lj1g0002842 Lotus japonicus HOM05D007221 ORTHO05D009204 8.4e-24 114.0 89 62.9
Cc10_g02840 Coffea canephora HOM05D007221 ORTHO05D009204 1.1e-23 113.6 89 66.3
Psat5g017120 Pisum sativum HOM05D007221 ORTHO05D009204 1.1e-23 113.6 89 61.8
Lalb_Chr11g0062321 Lupinus albus HOM05D007221 ORTHO05D009204 2.5e-23 112.5 88 61.4
Actinidia38006 Actinidia chinensis HOM05D007221 ORTHO05D009204 7.1e-23 110.9 85 67.1
Glyma.04G031900 Glycine max HOM05D007221 ORTHO05D009204 9.3e-23 110.5 90 60.0
Phvul.009G057900 Phaseolus vulgaris HOM05D007221 ORTHO05D009204 1.2e-22 110.2 82 62.2
VMungo1309G3139 Vigna mungo HOM05D007221 ORTHO05D009204 1.2e-22 110.2 82 62.2
arahy.Tifrunner.gnm1.ann1.50YYNM Arachis hypogaea HOM05D007221 ORTHO05D009204 2.1e-22 109.4 88 60.2
Dinv36085 Davidia involucrata HOM05D007221 ORTHO05D009204 2.1e-22 109.4 81 70.4
arahy.Tifrunner.gnm1.ann1.647QNX Arachis hypogaea HOM05D007221 ORTHO05D009204 3.5e-22 108.6 88 60.2
THA.LOC104812558 Tarenaya hassleriana HOM05D007221 ORTHO05D009204 4.6e-22 108.2 88 61.4
vmacro04529 Vaccinium macrocarpon HOM05D007221 ORTHO05D009204 7.9e-22 107.5 107 56.1
Aa31LG9G12820 Aethionema arabicum HOM05D007221 ORTHO05D009204 1.0e-21 107.1 88 60.2
SGA_v2.0_scaffold111G31495 Striga asiatica HOM05D007221 ORTHO05D009204 1.3e-21 106.7 90 56.7
ECA232G4972 Erigeron canadensis HOM05D007221 ORTHO05D009204 2.3e-21 105.9 88 59.1
CARHR181710 Cardamine hirsuta HOM05D007221 ORTHO05D009204 3.9e-21 105.1 88 59.1
AUR62035445 Chenopodium quinoa HOM05D007221 ORTHO05D009204 6.7e-21 104.4 91 57.1
ClCG08G015050 Citrullus lanatus HOM05D007221 ORTHO05D009204 6.7e-21 104.4 81 67.9
SalBow7G4300 Salvia bowleyana HOM05D007221 ORTHO05D009204 6.7e-21 104.4 91 59.3
AT5G42765 Arabidopsis thaliana HOM05D007221 ORTHO05D009204 1.1e-20 103.6 80 63.8
AL8G18350 Arabidopsis lyrata HOM05D007221 ORTHO05D009204 1.9e-20 102.8 80 63.8
AUR62039548 Chenopodium quinoa HOM05D007221 ORTHO05D009204 3.3e-20 102.1 89 56.2
Sp2g07400 Schrenkiella parvula HOM05D007221 ORTHO05D009204 3.3e-20 102.1 90 57.8
Thhalv10003376m.g Eutrema salsugineum HOM05D007221 ORTHO05D009204 4.8e-19 98.2 88 55.7
Carub.0008s0617 Capsella rubella HOM05D007221 ORTHO05D009204 1.1e-18 97.1 80 58.8
BcaB07g31048 Brassica carinata HOM05D007221 ORTHO05D009204 1.4e-18 96.7 88 54.5
BcaC04g21975 Brassica carinata HOM05D007221 ORTHO05D009204 1.4e-18 96.7 88 55.7
BolC9t55425H Brassica oleracea HOM05D007221 ORTHO05D009204 1.4e-18 96.7 88 55.7
Lsat_1_v5_gn_4_119280 Lactuca sativa HOM05D007221 ORTHO05D009204 1.8e-18 96.3 85 57.6
BraA09t37604Z Brassica rapa HOM05D007221 ORTHO05D009204 2.4e-18 95.9 88 54.5
A09p19950 Brassica napus HOM05D007221 ORTHO05D009204 6.9e-18 94.4 88 54.5
C09p25270 Brassica napus HOM05D007221 ORTHO05D009204 1.2e-17 93.6 88 55.7
Os03g0774400 Oryza sativa ssp. japonica HOM05D007221 ORTHO05D009204 2.6e-17 92.4 79 51.9
Zm00001eb059140 Zea mays HOM05D007221 ORTHO05D009204 6.5e-16 87.8 79 49.4
Haze_17964 Corylus avellana HOM05D007221 ORTHO05D009204 8.5e-16 87.4 63 71.4
Pp3c15_4620 Physcomitrium patens HOM05D007221 ORTHO05D009204 2.7e-14 82.4 88 46.6
Atru.chr13.477 Acer truncatum HOM05D007221 ORTHO05D009204 1.8e-13 79.7 62 64.5
CSS0008817 Camellia sinensis var. sinensis HOM05D007221 ORTHO05D009204 3.0e-13 79.0 61 63.9
Nn1g04985 Nelumbo nucifera HOM05D007221 ORTHO05D009204 3.0e-13 79.0 64 65.6
EL10Ac1g01796 Beta vulgaris HOM05D007221 ORTHO05D009204 3.9e-13 78.6 89 49.4
FAN15G0707 Fragaria x ananassa HOM05D007221 ORTHO05D009204 3.9e-13 78.6 64 65.6
Manes.05G159500 Manihot esculenta HOM05D007221 ORTHO05D009204 5.1e-13 78.2 63 66.7
HPP92_018805 Vanilla planifolia HOM05D007221 ORTHO05D009204 5.1e-13 78.2 73 52.1
HPP92_018706 Vanilla planifolia HOM05D007221 ORTHO05D009204 6.7e-13 77.8 73 52.1
HPP92_018787 Vanilla planifolia HOM05D007221 ORTHO05D009204 6.7e-13 77.8 73 52.1
Oeu063754.1 Olea europaea HOM05D007221 ORTHO05D009204 1.9e-12 76.3 62 62.9
Mapoly0024s0117 Marchantia polymorpha HOM05D007221 ORTHO05D009204 2.0e-09 66.2 87 42.5
Manes.18G026801 Manihot esculenta HOM05D007221 ORTHO05D009204 2.6e-09 65.9 91 46.2
AagrBONN_evm.TU.Sc2ySwM_368.2172 Anthoceros agrestis HOM05D007221 ORTHO05D009204 4.5e-09 65.1 79 43.0
SMO356G0611 Selaginella moellendorffii HOM05D007221 ORTHO05D009204 1.3e-08 63.5 79 43.0
Hund26574 Selenicereus undatus HOM05D007221 ORTHO05D009204 2.5e-07 59.3 47 66.0
RcHm_v2.0_Chr1g0350071 Rosa chinensis HOM05D007221 ORTHO05D009204 1.2e-06 57.0 42 66.7
Ah.05g167420 Amaranthus hybridus HOM05D007221 ORTHO05D009204 1.6e-06 56.6 42 59.5


User provided reference genes

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