Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib093G2051 Durio zibethinus HOM05D005945 ORTHO05D006749 0.0e+00 1740.3 874 100.0
Thecc.08G024700 Theobroma cacao HOM05D005945 ORTHO05D006749 0.0e+00 1244.6 873 75.7
COL.COLO4_26338 Corchorus olitorius HOM05D005945 ORTHO05D006749 0.0e+00 1109.0 909 67.5
Gorai.010G010800 Gossypium raimondii HOM05D005945 ORTHO05D006749 2.8e-291 1005.4 878 64.9
Gohir.D06G008100 Gossypium hirsutum HOM05D005945 ORTHO05D006749 8.0e-291 1003.8 883 64.8
Gohir.A06G010700 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.5e-284 983.0 869 63.3
Gorai.005G107400 Gossypium raimondii HOM05D005945 ORTHO05D006749 5.2e-205 718.8 869 51.6
Gohir.D02G094500 Gossypium hirsutum HOM05D005945 ORTHO05D006749 6.3e-203 711.8 869 51.2
Gohir.A03G078400 Gossypium hirsutum HOM05D005945 ORTHO05D006749 5.0e-160 569.3 698 51.1
QL02p007988 Quercus lobata HOM05D005945 ORTHO05D006749 1.9e-119 434.5 956 36.6
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 1.9e-114 417.9 891 37.6
Potri.014G181200 Populus trichocarpa HOM05D005945 ORTHO05D006749 2.5e-111 407.5 1000 35.0
Cfa018140 Carpinus fangiana HOM05D005945 ORTHO05D006749 2.2e-110 404.4 923 35.2
Cpa.g.sc64.76 Carica papaya HOM05D005945 ORTHO05D006749 1.3e-107 395.2 998 33.9
Actinidia15315 Actinidia chinensis HOM05D005945 ORTHO05D006749 6.5e-107 392.9 891 35.0
Haze_17984 Corylus avellana HOM05D005945 ORTHO05D006749 5.7e-103 379.8 922 34.1
Sabra14G0141200 Salix brachista HOM05D005945 ORTHO05D006749 2.8e-102 377.5 981 33.2
CSS0001698 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 3.1e-101 374.0 889 34.2
CSS0038834 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 3.1e-101 374.0 884 34.4
Prupe.1G381200 Prunus persica HOM05D005945 ORTHO05D006749 3.4e-100 370.5 882 34.4
RcHm_v2.0_Chr6g0300761 Rosa chinensis HOM05D005945 ORTHO05D006749 2.0e-92 344.7 902 34.3
Manes.05G161400 Manihot esculenta HOM05D005945 ORTHO05D006749 5.9e-92 343.2 877 32.6
Manes.18G028200 Manihot esculenta HOM05D005945 ORTHO05D006749 2.2e-91 341.3 875 33.3
TAR376G0838 Trochodendron aralioides HOM05D005945 ORTHO05D006749 2.7e-89 334.3 880 34.4
FvH4_2g39990 Fragaria vesca HOM05D005945 ORTHO05D006749 4.7e-89 333.6 895 33.9
MD08G1033800 Malus domestica HOM05D005945 ORTHO05D006749 6.7e-88 329.7 940 32.4
FAN20G0334 Fragaria x ananassa HOM05D005945 ORTHO05D006749 2.0e-87 328.2 894 33.8
FAN27G1966 Fragaria x ananassa HOM05D005945 ORTHO05D006749 8.2e-86 322.8 895 33.5
CiPaw.15G076000 Carya illinoinensis HOM05D005945 ORTHO05D006749 7.0e-85 319.7 1070 29.7
FAN15G0837 Fragaria x ananassa HOM05D005945 ORTHO05D006749 1.2e-84 318.9 896 33.4
MD15G1030400 Malus domestica HOM05D005945 ORTHO05D006749 7.7e-84 316.2 825 33.0
Nn5g29549 Nelumbo nucifera HOM05D005945 ORTHO05D006749 2.0e-79 301.6 902 33.6
THA.LOC104803244 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 2.7e-76 291.2 896 32.6
Cc10_g03040 Coffea canephora HOM05D005945 ORTHO05D006749 3.5e-76 290.8 895 32.1
Rhsim06G0034700 Rhododendron simsii HOM05D005945 ORTHO05D006749 4.2e-74 283.9 898 30.3
CANSAT25G3494 Cannabis sativa HOM05D005945 ORTHO05D006749 1.6e-73 282.0 905 30.9
MELO3C010931.2 Cucumis melo HOM05D005945 ORTHO05D006749 4.8e-70 270.4 878 31.4
TWI12G1232 Tripterygium wilfordii HOM05D005945 ORTHO05D006749 1.8e-69 268.5 877 29.4
ClCG08G015230 Citrullus lanatus HOM05D005945 ORTHO05D006749 2.4e-69 268.1 874 31.0
Nitab4.5_0000110g0520 Nicotiana tabacum HOM05D005945 ORTHO05D006749 1.0e-67 262.7 886 30.0
CsaV3_2G028570 Cucumis sativus L. HOM05D005945 ORTHO05D006749 2.3e-67 261.5 871 31.8
Oeu056183.1 Olea europaea HOM05D005945 ORTHO05D006749 1.8e-64 251.9 916 31.9
MSTRG.25161 Avicennia marina HOM05D005945 ORTHO05D006749 8.9e-64 249.6 893 30.5
Nitab4.5_0003783g0040 Nicotiana tabacum HOM05D005945 ORTHO05D006749 3.4e-63 247.7 890 29.1
Peaxi162Scf00690g00118 Petunia axillaris HOM05D005945 ORTHO05D006749 3.7e-62 244.2 908 28.4
Sed0009733 Sechium edule HOM05D005945 ORTHO05D006749 8.3e-62 243.0 893 29.1
Oeu036192.1 Olea europaea HOM05D005945 ORTHO05D006749 7.0e-61 240.0 906 29.7
Sc15g0006890 Simmondsia chinensis HOM05D005945 ORTHO05D006749 9.2e-61 239.6 901 29.6
Ca_03064_v3 Cicer arietinum L. HOM05D005945 ORTHO05D006749 1.6e-60 238.8 901 28.5
PGSC0003DMG400005162 Solanum tuberosum HOM05D005945 ORTHO05D006749 2.7e-60 238.0 903 29.9
PGR031G1506 Punica granatum HOM05D005945 ORTHO05D006749 2.5e-58 231.5 865 30.9
AT3G56870 Arabidopsis thaliana HOM05D005945 ORTHO05D006749 1.0e-56 226.1 884 29.3
Eucgr.F01555 Eucalyptus grandis HOM05D005945 ORTHO05D006749 1.0e-56 226.1 916 29.9
arahy.Tifrunner.gnm1.ann1.Q0ZVI3 Arachis hypogaea HOM05D005945 ORTHO05D006749 1.8e-56 225.3 871 29.5
Lj3g0003314 Lotus japonicus HOM05D005945 ORTHO05D006749 1.8e-56 225.3 884 28.7
GSVIVG01009690001 Vitis vinifera HOM05D005945 ORTHO05D006749 3.1e-56 224.6 270 51.5
TPR.G32532 Trifolium pratense HOM05D005945 ORTHO05D006749 4.0e-56 224.2 1028 28.0
arahy.Tifrunner.gnm1.ann1.01TKSZ Arachis hypogaea HOM05D005945 ORTHO05D006749 6.8e-56 223.4 904 29.1
Sed0010063 Sechium edule HOM05D005945 ORTHO05D006749 6.8e-56 223.4 875 27.9
Migut.C00710 Erythranthe guttata HOM05D005945 ORTHO05D006749 2.6e-55 221.5 882 29.4
Glyma.03G071500 Glycine max HOM05D005945 ORTHO05D006749 2.6e-55 221.5 916 27.8
MBI16_g17464_MAGBIO Magnolia biondii HOM05D005945 ORTHO05D006749 4.4e-55 220.7 937 29.1
DCAR_008766 Daucus carota HOM05D005945 ORTHO05D006749 5.8e-55 220.3 896 29.5
Psat7g242000 Pisum sativum HOM05D005945 ORTHO05D006749 2.2e-54 218.4 910 27.7
Carub.0005s2360 Capsella rubella HOM05D005945 ORTHO05D006749 3.7e-54 217.6 886 27.0
AL5G38260 Arabidopsis lyrata HOM05D005945 ORTHO05D006749 6.4e-54 216.9 875 27.4
Thhalv10005811m.g Eutrema salsugineum HOM05D005945 ORTHO05D006749 1.1e-53 216.1 889 27.9
Sp5g05720 Schrenkiella parvula HOM05D005945 ORTHO05D006749 3.2e-53 214.5 916 27.2
Atru.chr13.502 Acer truncatum HOM05D005945 ORTHO05D006749 1.6e-52 212.2 216 54.2
Medtr4g019490 Medicago truncatula HOM05D005945 ORTHO05D006749 2.7e-52 211.5 1079 26.5
Phvul.010G012000 Phaseolus vulgaris HOM05D005945 ORTHO05D006749 8.6e-51 206.5 871 28.1
BcaC07g39998 Brassica carinata HOM05D005945 ORTHO05D006749 1.1e-50 206.1 918 27.2
C08p32110 Brassica napus HOM05D005945 ORTHO05D006749 1.1e-50 206.1 918 27.2
VMungo0331G0095 Vigna mungo HOM05D005945 ORTHO05D006749 1.5e-50 205.7 870 28.2
A09p49740 Brassica napus HOM05D005945 ORTHO05D006749 2.5e-50 204.9 911 26.2
BraA09t40427Z Brassica rapa HOM05D005945 ORTHO05D006749 2.5e-50 204.9 911 26.2
ECA247G0868 Erigeron canadensis HOM05D005945 ORTHO05D006749 3.3e-50 204.5 970 27.4
BolC8t50829H Brassica oleracea HOM05D005945 ORTHO05D006749 5.6e-50 203.8 910 26.6
Glyma.01G104600 Glycine max HOM05D005945 ORTHO05D006749 1.4e-48 199.1 921 27.7
Hund26580 Selenicereus undatus HOM05D005945 ORTHO05D006749 1.5e-47 195.7 894 27.1
Sopen04g033790 Solanum pennellii HOM05D005945 ORTHO05D006749 1.7e-46 192.2 822 28.8
Lj4A42T73 Lonicera japonica HOM05D005945 ORTHO05D006749 2.2e-46 191.8 177 59.3
Atru.chr13.504 Acer truncatum HOM05D005945 ORTHO05D006749 8.3e-46 189.9 430 34.0
Lj2g0002553 Lotus japonicus HOM05D005945 ORTHO05D006749 1.9e-45 188.7 869 26.2
Actinidia22556 Actinidia chinensis HOM05D005945 ORTHO05D006749 2.4e-45 188.3 561 30.3
Dinv36067 Davidia involucrata HOM05D005945 ORTHO05D006749 3.2e-45 188.0 230 51.7
Lsat_1_v5_gn_1_17620 Lactuca sativa HOM05D005945 ORTHO05D006749 1.2e-44 186.0 370 38.4
Lalb_Chr03g0042671 Lupinus albus HOM05D005945 ORTHO05D006749 7.8e-44 183.3 873 26.6
HanXRQChr04g0105591 Helianthus annuus HOM05D005945 ORTHO05D006749 3.0e-43 181.4 900 26.3
BcaC07g40112 Brassica carinata HOM05D005945 ORTHO05D006749 3.9e-43 181.0 909 26.3
AUR62038825 Chenopodium quinoa HOM05D005945 ORTHO05D006749 5.1e-43 180.6 867 27.1
Solyc04g080200.4 Solanum lycopersicum HOM05D005945 ORTHO05D006749 5.1e-43 180.6 817 28.9
EL10Ac1g01817 Beta vulgaris HOM05D005945 ORTHO05D006749 1.5e-42 179.1 934 27.5
Aa31LG10G11720 Aethionema arabicum HOM05D005945 ORTHO05D006749 3.3e-42 177.9 294 40.8
AUR62043686 Chenopodium quinoa HOM05D005945 ORTHO05D006749 3.3e-42 177.9 921 27.6
vmacro21630 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 1.6e-41 175.6 691 28.8
TAR628G0886 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.1e-40 172.9 317 42.3
CARHR167020 Cardamine hirsuta HOM05D005945 ORTHO05D006749 1.5e-39 169.1 302 37.1
Ah.11g043130 Amaranthus hybridus HOM05D005945 ORTHO05D006749 2.0e-39 168.7 984 24.8
SGA_v2.0_scaffold326G48709 Striga asiatica HOM05D005945 ORTHO05D006749 1.3e-38 166.0 897 27.0
PSO675G9049 Papaver somniferum HOM05D005945 ORTHO05D006749 6.4e-38 163.7 387 35.7
PSO541G4169 Papaver somniferum HOM05D005945 ORTHO05D006749 4.1e-37 161.0 388 35.3
Aqoxy6G01057 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 2.3e-35 155.2 1053 25.3
TAR628G0416 Trochodendron aralioides HOM05D005945 ORTHO05D006749 2.1e-33 148.7 175 53.7
HanXRQChr04g0105581 Helianthus annuus HOM05D005945 ORTHO05D006749 4.7e-33 147.5 354 34.7
Os03g0594700 Oryza sativa ssp. japonica HOM05D005945 ORTHO05D006749 5.8e-31 140.6 305 36.1
Zm00001eb021170 Zea mays HOM05D005945 ORTHO05D006749 2.1e-28 132.1 301 37.2
Aqoxy4G01586 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 2.7e-28 131.7 964 24.6
Zm00001eb404680 Zea mays HOM05D005945 ORTHO05D006749 6.0e-28 130.6 291 36.8
ATR0618G067 Amborella trichopoda HOM05D005945 ORTHO05D006749 1.9e-26 125.6 273 35.9
vmacro21631 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 1.9e-26 125.6 145 49.0
Sc18g0006320 Simmondsia chinensis HOM05D005945 ORTHO05D006749 2.4e-24 118.6 312 33.0
Lalb_Chr19g0125071 Lupinus albus HOM05D005945 ORTHO05D006749 4.0e-24 117.9 214 38.8
Aqoxy4G01559 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 3.4e-23 114.8 940 23.6
Ah.05g167400 Amaranthus hybridus HOM05D005945 ORTHO05D006749 2.2e-22 112.1 895 24.1
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 2.7e-20 105.1 140 44.3
HPP92_021270 Vanilla planifolia HOM05D005945 ORTHO05D006749 2.7e-20 105.1 250 35.6
Sabra02G0199400 Salix brachista HOM05D005945 ORTHO05D006749 2.3e-11 75.5 91 48.4
Potri.002G262601 Populus trichocarpa HOM05D005945 ORTHO05D006749 5.1e-11 74.3 107 41.1
THA.LOC104803300 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 1.5e-10 72.8 284 30.3
SEGI_18222 Sequoiadendron giganteum HOM05D007138 ORTHO05D009148 2.4e-08 65.5 135 31.9
CDE02G0146 Ceratophyllum demersum HOM05D060868 ORTHO05D006749 3.1e-08 65.1 159 33.3
CDE04G3738 Ceratophyllum demersum HOM05D060868 ORTHO05D006749 4.0e-08 64.7 121 33.1
AagrBONN_evm.TU.Sc2ySwM_344.3266 Anthoceros agrestis HOM05D005945 ORTHO05D006749 1.2e-07 63.2 155 32.9
TAR381G0602 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.2e-07 63.2 137 40.1
Lalb_Chr19g0125061 Lupinus albus HOM05D005945 ORTHO05D006749 2.0e-07 62.4 246 28.9
Lj4P42T20 Lonicera japonica HOM05D005945 ORTHO05D006749 3.4e-07 61.6 266 27.4
Mapoly0005s0138 Marchantia polymorpha HOM05D036654 ORTHO05D006749 1.0e-06 60.1 153 32.0
HPP92_021280 Vanilla planifolia HOM05D050438 ORTHO05D006749 1.3e-06 59.7 250 30.0
CBR_g25863 Chara braunii HOM05D005945 ORTHO05D006749 3.8e-06 58.2 157 30.6
Pp3c7_23790 Physcomitrium patens HOM05D036654 ORTHO05D050357 4.9e-06 57.8 171 27.5


User provided reference genes

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