Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib093G1977 Durio zibethinus HOM05D007372 ORTHO05D009318 3.3e-159 565.1 303 100.0
Gohir.A02G062200 Gossypium hirsutum HOM05D007372 ORTHO05D009318 8.6e-83 311.2 312 58.7
Gohir.D02G067900 Gossypium hirsutum HOM05D007372 ORTHO05D009318 6.8e-80 301.6 320 57.2
Gorai.005G076700 Gossypium raimondii HOM05D007372 ORTHO05D009318 6.8e-80 301.6 320 57.2
COL.COLO4_24577 Corchorus olitorius HOM05D007372 ORTHO05D009318 9.0e-56 221.5 266 50.4
Cfa018264 Carpinus fangiana HOM05D007372 ORTHO05D009318 2.0e-47 193.7 306 41.2
Actinidia17763 Actinidia chinensis HOM05D007372 ORTHO05D009318 6.4e-46 188.7 334 38.9
CiPaw.15G011400 Carya illinoinensis HOM05D007372 ORTHO05D009318 1.9e-45 187.2 318 41.8
Potri.002G062800 Populus trichocarpa HOM05D007372 ORTHO05D009318 5.4e-45 185.7 306 42.2
arahy.Tifrunner.gnm1.ann1.CL5RXG Arachis hypogaea HOM05D007372 ORTHO05D009318 2.1e-44 183.7 304 40.5
Nitab4.5_0007403g0010 Nicotiana tabacum HOM05D007372 ORTHO05D009318 4.6e-44 182.6 338 38.2
Sabra02G0050700 Salix brachista HOM05D007372 ORTHO05D009318 6.0e-44 182.2 296 42.9
arahy.Tifrunner.gnm1.ann1.1F4W04 Arachis hypogaea HOM05D007372 ORTHO05D009318 1.3e-43 181.0 304 39.8
Dinv02471 Davidia involucrata HOM05D007372 ORTHO05D009318 1.5e-42 177.6 394 34.5
Manes.02G185100 Manihot esculenta HOM05D007372 ORTHO05D009318 9.6e-42 174.9 302 39.4
Eucgr.F02675 Eucalyptus grandis HOM05D007372 ORTHO05D009318 4.8e-41 172.6 305 40.0
Lj2g0008181 Lotus japonicus HOM05D007372 ORTHO05D009318 3.4e-39 166.4 312 37.8
Nn5g28866 Nelumbo nucifera HOM05D007372 ORTHO05D009318 4.5e-39 166.0 306 40.5
Cpa.g.sc26.120 Carica papaya HOM05D007372 ORTHO05D009318 5.8e-39 165.6 309 39.8
THA.LOC104809747 Tarenaya hassleriana HOM05D007372 ORTHO05D009318 6.4e-38 162.2 310 35.5
TAR381G1194 Trochodendron aralioides HOM05D007372 ORTHO05D009318 1.1e-37 161.4 287 37.3
Sopen04g028150 Solanum pennellii HOM05D007372 ORTHO05D009318 2.4e-37 160.2 320 37.5
Solyc04g072040.1 Solanum lycopersicum HOM05D007372 ORTHO05D009318 3.2e-37 159.8 317 37.2
Aa31LG4G8880 Aethionema arabicum HOM05D007372 ORTHO05D009318 5.5e-37 159.1 322 35.7
Haze_17824 Corylus avellana HOM05D007372 ORTHO05D009318 1.2e-36 157.9 306 36.6
Glyma.02G077500 Glycine max HOM05D007372 ORTHO05D009318 2.1e-36 157.1 303 38.3
Carub.0002s1852 Capsella rubella HOM05D007372 ORTHO05D009318 2.7e-36 156.8 320 36.9
PSO675G2246 Papaver somniferum HOM05D007372 ORTHO05D009318 2.7e-36 156.8 317 37.5
AT1G71760 Arabidopsis thaliana HOM05D007372 ORTHO05D009318 7.9e-36 155.2 323 36.2
PGR042G0625 Punica granatum HOM05D007372 ORTHO05D009318 1.0e-35 154.8 315 38.1
BolC6t39633H Brassica oleracea HOM05D007372 ORTHO05D009318 1.3e-35 154.5 312 36.5
C06p45810 Brassica napus HOM05D007372 ORTHO05D009318 1.8e-35 154.1 309 36.9
CAN.G1183.23 Capsicum annuum HOM05D007372 ORTHO05D009318 2.3e-35 153.7 314 37.6
CANSAT25G1084 Cannabis sativa HOM05D007372 ORTHO05D009318 3.9e-35 152.9 313 38.3
AL2G31330 Arabidopsis lyrata HOM05D007372 ORTHO05D009318 8.7e-35 151.8 318 37.4
BcaC08g46602 Brassica carinata HOM05D007372 ORTHO05D009318 8.7e-35 151.8 305 37.4
Sp5g26780 Schrenkiella parvula HOM05D007372 ORTHO05D009318 8.7e-35 151.8 314 36.0
Migut.C00154 Erythranthe guttata HOM05D007372 ORTHO05D009318 1.5e-34 151.0 345 35.9
Phvul.004G088900 Phaseolus vulgaris HOM05D007372 ORTHO05D009318 5.6e-34 149.1 307 37.8
A07p37910 Brassica napus HOM05D007372 ORTHO05D009318 7.4e-34 148.7 311 36.7
QL02p037053 Quercus lobata HOM05D007372 ORTHO05D009318 7.4e-34 148.7 307 36.2
TPR.G19684 Trifolium pratense HOM05D007372 ORTHO05D009318 7.4e-34 148.7 305 38.4
ClCG08G007220 Citrullus lanatus HOM05D007372 ORTHO05D009318 3.7e-33 146.4 345 33.3
Lalb_Chr19g0129991 Lupinus albus HOM05D007372 ORTHO05D009318 3.7e-33 146.4 311 36.3
BraA07t31356Z Brassica rapa HOM05D007372 ORTHO05D009318 8.2e-33 145.2 309 37.9
MD05G1035800 Malus domestica HOM05D007372 ORTHO05D009318 8.2e-33 145.2 299 36.8
Psat0ss32450g0040 Pisum sativum HOM05D007372 ORTHO05D009318 8.2e-33 145.2 308 35.7
Prupe.8G043800 Prunus persica HOM05D007372 ORTHO05D009318 1.1e-32 144.8 320 36.9
AUR62034913 Chenopodium quinoa HOM05D007372 ORTHO05D009318 3.1e-32 143.3 322 34.8
Cc10_g06440 Coffea canephora HOM05D007372 ORTHO05D009318 3.1e-32 143.3 182 50.5
Sed0016879 Sechium edule HOM05D007372 ORTHO05D009318 5.3e-32 142.5 333 34.5
unitig_46.g18009 Utricularia gibba HOM05D007372 ORTHO05D009318 5.3e-32 142.5 304 36.2
vmacro22649 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 5.3e-32 142.5 354 33.6
Nitab4.5_0004252g0050 Nicotiana tabacum HOM05D007372 ORTHO05D009318 1.2e-31 141.4 301 33.6
VMungo0464G0612 Vigna mungo HOM05D007372 ORTHO05D009318 1.5e-31 141.0 303 36.0
Rhsim06G0093000 Rhododendron simsii HOM05D007372 ORTHO05D009318 7.6e-31 138.7 327 33.3
PSO541G3596 Papaver somniferum HOM05D007372 ORTHO05D009318 2.2e-30 137.1 331 35.3
Aqoxy6G00438 Aquilegia oxysepala HOM05D007372 ORTHO05D009318 2.9e-30 136.7 294 33.7
Peaxi162Scf00360g00916 Petunia axillaris HOM05D007372 ORTHO05D009318 2.9e-30 136.7 322 33.9
CsaV3_6G004890 Cucumis sativus L. HOM05D007372 ORTHO05D009318 8.4e-30 135.2 344 34.3
TPR.G19681 Trifolium pratense HOM05D007372 ORTHO05D009318 8.4e-30 135.2 308 34.7
Hma1.2p1_0678F.1_g202150 Hydrangea macrophylla HOM05D007372 ORTHO05D009318 5.5e-29 132.5 107 65.4
vmacro22532 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 1.6e-28 131.0 349 32.4
Sc26g0002770 Simmondsia chinensis HOM05D007372 ORTHO05D009318 1.8e-27 127.5 299 37.8
SalBow7G3614 Salvia bowleyana HOM05D007372 ORTHO05D009318 3.0e-27 126.7 296 34.8
Ah.05g168260 Amaranthus hybridus HOM05D007372 ORTHO05D009318 1.9e-26 124.0 317 33.8
ECA232G4628 Erigeron canadensis HOM05D007372 ORTHO05D009318 1.9e-26 124.0 335 31.9
RcHm_v2.0_Chr6g0273891 Rosa chinensis HOM05D007372 ORTHO05D009318 1.9e-26 124.0 106 63.2
Ca_04659_v3 Cicer arietinum L. HOM05D007372 ORTHO05D009318 2.5e-26 123.6 294 33.7
Lsat_1_v5_gn_9_42440 Lactuca sativa HOM05D007372 ORTHO05D009318 4.3e-26 122.9 301 34.2
TWI60G0690 Tripterygium wilfordii HOM05D007372 ORTHO05D009318 5.7e-26 122.5 250 39.6
MBI01_g29001_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 9.7e-26 121.7 299 32.4
QL02p036533 Quercus lobata HOM05D007372 ORTHO05D009318 3.7e-25 119.8 282 35.1
Hund17499 Selenicereus undatus HOM05D007372 ORTHO05D009318 1.1e-24 118.2 299 31.1
FvH4_2g12850 Fragaria vesca HOM05D007372 ORTHO05D009318 1.4e-24 117.9 108 59.3
Thhalv10019840m.g Eutrema salsugineum HOM05D007372 ORTHO05D009318 1.5e-23 114.4 108 59.3
EL10Ac1g01626 Beta vulgaris HOM05D007372 ORTHO05D009318 2.6e-23 113.6 322 30.7
MSTRG.969 Avicennia marina HOM05D007372 ORTHO05D009318 4.5e-23 112.8 101 59.4
MELO3C019965.2 Cucumis melo HOM05D007372 ORTHO05D009318 7.6e-23 112.1 330 30.9
SGA_v2.0_scaffold82G26208 Striga asiatica HOM05D007372 ORTHO05D009318 7.6e-23 112.1 333 29.4
Medtr1191s0010 Medicago truncatula HOM05D007372 ORTHO05D009318 1.1e-21 108.2 116 51.7
FAN24G0386 Fragaria x ananassa HOM05D023021 ORTHO05D025344 7.2e-21 105.5 317 29.3
Ciclev10001857m.g Citrus clementina HOM05D007372 ORTHO05D009318 1.0e-19 101.7 63 76.2
GSVIVG01013700001 Vitis vinifera HOM05D007372 ORTHO05D009318 3.0e-19 100.1 92 57.6
MBI01_g42373_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 5.1e-19 99.4 217 35.9
Os01g0716300 Oryza sativa ssp. japonica HOM05D007372 ORTHO05D009318 1.1e-18 98.2 113 50.4
Psat6g060160 Pisum sativum HOM05D007372 ORTHO05D009318 1.5e-18 97.8 176 38.6
HPP92_004582 Vanilla planifolia HOM05D007372 ORTHO05D009318 1.5e-18 97.8 108 50.9
Zm00001eb361480 Zea mays HOM05D007372 ORTHO05D009318 9.7e-18 95.1 106 49.1
CARHR291030 Cardamine hirsuta HOM05D007372 ORTHO05D009318 4.8e-17 92.8 210 35.2
ATR1120G103 Amborella trichopoda HOM05D007372 ORTHO05D009318 4.1e-16 89.7 215 36.7
Medtr0571s0030 Medicago truncatula HOM05D007372 ORTHO05D009318 1.2e-15 88.2 100 49.0
AagrBONN_evm.TU.Sc2ySwM_117.786 Anthoceros agrestis HOM05D007372 ORTHO05D009318 1.6e-12 77.8 121 39.7
Oeu046069.1 Olea europaea HOM05D007372 ORTHO05D009318 1.6e-12 77.8 311 28.3
Mapoly0147s0022 Marchantia polymorpha HOM05D007372 ORTHO05D009318 1.4e-11 74.7 114 38.6
SMO304G0033 Selaginella moellendorffii HOM05D007372 ORTHO05D009318 1.8e-11 74.3 108 41.7
Rhsim04G0161000 Rhododendron simsii HOM05D007372 ORTHO05D009318 2.6e-10 70.5 62 61.3
PGSC0003DMG400025053 Solanum tuberosum HOM05D007372 ORTHO05D009318 9.7e-10 68.6 271 27.3
HanXRQChr11g0343631 Helianthus annuus HOM05D007372 ORTHO05D009318 2.2e-09 67.4 157 35.0
Rhsim06G0189600 Rhododendron simsii HOM05D007372 ORTHO05D009318 2.8e-09 67.0 83 48.2
Ah.05g168300 Amaranthus hybridus HOM05D007372 ORTHO05D009318 5.3e-08 62.8 255 27.8
FAN20G1411 Fragaria x ananassa HOM05D023021 ORTHO05D025344 1.2e-07 61.6 131 31.3
FvH4_2g12851 Fragaria vesca HOM05D023021 ORTHO05D025344 1.5e-07 61.2 131 31.3
SpUn0095_0010 Schrenkiella parvula HOM05D007372 ORTHO05D009318 1.5e-07 61.2 218 27.1


User provided reference genes

Program Settings