Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib093G1486 Durio zibethinus HOM05D009119 ORTHO05D003655 4.4e-78 295.0 211 100.0
Thecc.08G065300 Theobroma cacao HOM05D009119 ORTHO05D003655 6.1e-35 151.8 114 68.4
COL.COLO4_11973 Corchorus olitorius HOM05D009119 ORTHO05D003655 1.1e-25 120.9 140 57.9
QL09p016238 Quercus lobata HOM05D009119 ORTHO05D028574 8.8e-18 94.7 95 69.5
THA.LOC104827412 Tarenaya hassleriana HOM05D009119 ORTHO05D003655 2.8e-16 89.7 113 50.4
Cfa013717 Carpinus fangiana HOM05D009119 ORTHO05D003655 8.2e-16 88.2 104 51.0
Haze_22364 Corylus avellana HOM05D009119 ORTHO05D003655 1.4e-15 87.4 97 53.6
QL09p016294 Quercus lobata HOM05D009119 ORTHO05D003655 1.1e-12 77.8 79 55.7
PGR042G3889 Punica granatum HOM05D009119 ORTHO05D003655 1.5e-12 77.4 72 56.9
QL09p016276 Quercus lobata HOM05D009119 ORTHO05D003655 2.5e-12 76.6 75 57.3
Cpa.g.sc36.192 Carica papaya HOM05D009119 ORTHO05D003655 2.1e-11 73.6 81 54.3
AUR62017911 Chenopodium quinoa HOM05D003899 ORTHO05D003655 8.0e-11 71.6 107 38.3
AUR62003600 Chenopodium quinoa HOM05D003899 ORTHO05D003655 1.8e-10 70.5 109 38.5
Potri.005G160500 Populus trichocarpa HOM05D009119 ORTHO05D003655 4.0e-10 69.3 92 45.7
Gohir.A02G066500 Gossypium hirsutum HOM05D003899 ORTHO05D003655 2.0e-09 67.0 84 45.2
Gorai.005G081600 Gossypium raimondii HOM05D003899 ORTHO05D003655 3.4e-09 66.2 85 50.6
Manes.12G153900 Manihot esculenta HOM05D003899 ORTHO05D003655 4.4e-09 65.9 107 40.2
PSO017G4320 Papaver somniferum HOM05D003899 ORTHO05D003655 4.4e-09 65.9 85 48.2
EL10Ac7g17632 Beta vulgaris HOM05D003899 ORTHO05D003655 5.7e-09 65.5 85 40.0
EL10Ac6g15278 Beta vulgaris HOM05D003899 ORTHO05D003655 9.8e-09 64.7 85 40.0
CAN.G375.87 Capsicum annuum HOM05D003899 ORTHO05D003655 1.3e-08 64.3 108 38.0
Cfa013720 Carpinus fangiana HOM05D009119 ORTHO05D028574 2.2e-08 63.5 65 49.2
PSO170G2020 Papaver somniferum HOM05D003899 ORTHO05D003655 2.8e-08 63.2 85 50.6
arahy.Tifrunner.gnm1.ann1.UE47UQ Arachis hypogaea HOM05D003899 ORTHO05D003655 4.8e-08 62.4 102 37.3
SGA_v2.0_scaffold73G24343 Striga asiatica HOM05D003899 ORTHO05D003655 4.8e-08 62.4 88 52.3
Thecc.08G144600 Theobroma cacao HOM05D003899 ORTHO05D003655 8.3e-08 61.6 79 44.3
PGR031G0996 Punica granatum HOM05D009119 ORTHO05D003655 1.4e-07 60.8 75 68.0
Ciclev10003780m.g Citrus clementina HOM05D003899 ORTHO05D003655 1.8e-07 60.5 113 38.9
AUR62043709 Chenopodium quinoa HOM05D003899 ORTHO05D003655 2.4e-07 60.1 95 37.9
Dinv24330 Davidia involucrata HOM05D003899 ORTHO05D003655 2.4e-07 60.1 84 42.9
Gohir.A11G224804 Gossypium hirsutum HOM05D003899 ORTHO05D003655 3.1e-07 59.7 78 42.3
Manes.18G062666 Manihot esculenta HOM05D009119 ORTHO05D003655 3.1e-07 59.7 55 49.1
MD05G1014900 Malus domestica HOM05D003899 ORTHO05D003655 4.1e-07 59.3 85 41.2
Nn5g29958 Nelumbo nucifera HOM05D009119 ORTHO05D003655 5.4e-07 58.9 45 68.9
Actinidia06640 Actinidia chinensis HOM05D003899 ORTHO05D003655 7.0e-07 58.5 93 38.7
Lj1g0026176 Lotus japonicus HOM05D003899 ORTHO05D003655 7.0e-07 58.5 84 38.1
Atru.chr4.839 Acer truncatum HOM05D003899 ORTHO05D003655 9.1e-07 58.2 108 38.9
Haze_17704 Corylus avellana HOM05D003899 ORTHO05D003655 9.1e-07 58.2 85 40.0
MBI06_g43012_MAGBIO Magnolia biondii HOM05D003899 ORTHO05D003655 9.1e-07 58.2 118 43.2
Nn5g28623 Nelumbo nucifera HOM05D003899 ORTHO05D003655 1.2e-06 57.8 87 41.4
TWI32G0122 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 1.6e-06 57.4 115 36.5
QL06p029227 Quercus lobata HOM05D003899 ORTHO05D003655 2.0e-06 57.0 81 42.0
PGSC0003DMG400027629 Solanum tuberosum HOM05D003899 ORTHO05D003655 2.0e-06 57.0 86 50.0
CiPaw.16G017800 Carya illinoinensis HOM05D003899 ORTHO05D003655 2.7e-06 56.6 120 39.2
Duzib264G1053 Durio zibethinus HOM05D003899 ORTHO05D003655 2.7e-06 56.6 127 36.2
PSO126G0001 Papaver somniferum HOM05D003899 ORTHO05D003655 2.7e-06 56.6 75 52.0
DCAR_007049 Daucus carota HOM05D003899 ORTHO05D003655 3.5e-06 56.2 110 37.3
FAN20G0153 Fragaria x ananassa HOM05D003899 ORTHO05D003655 3.5e-06 56.2 79 41.8
FvH4_2g14670 Fragaria vesca HOM05D003899 ORTHO05D003655 4.5e-06 55.8 111 36.0
FAN24G0119 Fragaria x ananassa HOM05D003899 ORTHO05D003655 4.5e-06 55.8 111 36.0
Thecc.01G128000 Theobroma cacao HOM05D003899 ORTHO05D003655 4.5e-06 55.8 85 40.0
Cfa013718 Carpinus fangiana HOM05D009119 ORTHO05D028574 5.9e-06 55.5 71 39.4
FAN15G3500 Fragaria x ananassa HOM05D003899 ORTHO05D003655 5.9e-06 55.5 79 41.8
Prupe.8G018800 Prunus persica HOM05D003899 ORTHO05D003655 5.9e-06 55.5 78 42.3


User provided reference genes

Program Settings