Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib093G1301 Durio zibethinus HOM05D007476 ORTHO05D006998 1.4e-85 320.1 222 100.0
Thecc.05G050900 Theobroma cacao HOM05D007476 ORTHO05D006998 9.2e-58 227.6 221 79.2
Gohir.A13G076000 Gossypium hirsutum HOM05D007476 ORTHO05D006998 2.7e-49 199.5 220 64.5
Gohir.D04G116600 Gossypium hirsutum HOM05D007476 ORTHO05D006998 7.8e-49 198.0 223 66.4
Gorai.009G421500 Gossypium raimondii HOM05D007476 ORTHO05D006998 2.3e-48 196.4 223 65.9
Gorai.001G248500 Gossypium raimondii HOM05D007476 ORTHO05D006998 5.0e-48 195.3 220 64.1
Duzib128G0759 Durio zibethinus HOM05D007476 ORTHO05D006998 4.3e-47 192.2 192 72.9
Gohir.A04G077400 Gossypium hirsutum HOM05D007476 ORTHO05D006998 1.2e-44 184.1 194 70.1
Gohir.A09G160400 Gossypium hirsutum HOM05D007476 ORTHO05D006998 1.0e-40 171.0 169 65.1
Gohir.D13G096300 Gossypium hirsutum HOM05D007476 ORTHO05D006998 3.9e-40 169.1 220 60.0
COL.COLO4_10302 Corchorus olitorius HOM05D007476 ORTHO05D006998 3.0e-32 142.9 133 75.2
Prupe.6G244900 Prunus persica HOM05D007476 ORTHO05D006998 2.5e-31 139.8 205 56.1
Gorai.006G177500 Gossypium raimondii HOM05D007476 ORTHO05D006998 9.5e-31 137.9 106 72.6
RcHm_v2.0_Chr3g0468131 Rosa chinensis HOM05D007476 ORTHO05D006998 5.8e-28 128.6 193 51.3
Cfa017474 Carpinus fangiana HOM05D007476 ORTHO05D006998 1.3e-27 127.5 200 45.5
Atru.chr8.2515 Acer truncatum HOM05D007476 ORTHO05D006998 5.4e-26 122.1 227 48.5
QL07p045831 Quercus lobata HOM05D007476 ORTHO05D006998 1.3e-24 117.5 146 61.0
Ciclev10012743m.g Citrus clementina HOM05D007476 ORTHO05D006998 3.9e-24 115.9 195 53.3
Haze_20680 Corylus avellana HOM05D007476 ORTHO05D006998 7.3e-23 111.7 276 38.8
Gohir.D09G156000 Gossypium hirsutum HOM05D007476 ORTHO05D006998 1.4e-21 107.5 86 69.8
GSVIVG01025570001 Vitis vinifera HOM05D007476 ORTHO05D006998 1.4e-21 107.5 119 70.6
VMungo1383G2744 Vigna mungo HOM05D007476 ORTHO05D006998 1.2e-20 104.4 187 53.5
Dinv37238 Davidia involucrata HOM05D007476 ORTHO05D006998 2.6e-20 103.2 158 59.5
MD12G1129600 Malus domestica HOM05D007476 ORTHO05D006998 1.3e-19 100.9 199 43.2
Potri.016G082900 Populus trichocarpa HOM05D007476 ORTHO05D006998 1.9e-18 97.1 202 44.1
FAN02G2102 Fragaria x ananassa HOM05D007476 ORTHO05D006998 7.1e-18 95.1 175 50.9
CiPaw.10G138800 Carya illinoinensis HOM05D007476 ORTHO05D006998 9.3e-18 94.7 210 48.6
CiPaw.09G184800 Carya illinoinensis HOM05D007476 ORTHO05D006998 1.2e-17 94.4 239 43.5
THA.LOC104823246 Tarenaya hassleriana HOM05D010138 ORTHO05D006998 1.2e-17 94.4 191 48.2
Phvul.001G173200 Phaseolus vulgaris HOM05D007476 ORTHO05D006998 1.6e-17 94.0 190 48.4
CANSAT80G1705 Cannabis sativa HOM05D007476 ORTHO05D006998 6.0e-17 92.0 180 41.1
Hund12067 Selenicereus undatus HOM05D007476 ORTHO05D006998 1.0e-16 91.3 233 37.8
FAN05G2812 Fragaria x ananassa HOM05D007476 ORTHO05D006998 1.3e-16 90.9 175 51.4
Dinv35685 Davidia involucrata HOM05D007476 ORTHO05D006998 2.3e-16 90.1 215 48.8
COL.COLO4_03678 Corchorus olitorius HOM05D001978 ORTHO05D003036 5.1e-16 89.0 146 45.2
Sopen10g035340 Solanum pennellii HOM05D007476 ORTHO05D006998 5.1e-16 89.0 193 46.6
Eucgr.A01204 Eucalyptus grandis HOM05D007476 ORTHO05D006998 6.6e-16 88.6 207 47.3
vmacro20080 Vaccinium macrocarpon HOM05D007476 ORTHO05D006998 6.6e-16 88.6 137 59.9
MD04G1111200 Malus domestica HOM05D007476 ORTHO05D006998 8.7e-16 88.2 118 54.2
Cc06_g03350 Coffea canephora HOM05D007476 ORTHO05D006998 1.9e-15 87.0 131 62.6
arahy.Tifrunner.gnm1.ann1.UZX3W4 Arachis hypogaea HOM05D007476 ORTHO05D006998 2.5e-15 86.7 134 56.7
ECA238G2167 Erigeron canadensis HOM05D007476 ORTHO05D006998 5.6e-15 85.5 188 50.5
Lalb_Chr20g0113001 Lupinus albus HOM05D007476 ORTHO05D006998 9.6e-15 84.7 194 45.4
AUR62040509 Chenopodium quinoa HOM05D007476 ORTHO05D006998 2.1e-14 83.6 200 46.5
Eucgr.K03190 Eucalyptus grandis HOM05D007476 ORTHO05D006998 2.1e-14 83.6 142 53.5
Solyc10g085970.3 Solanum lycopersicum HOM05D007476 ORTHO05D006998 3.6e-14 82.8 181 43.6
Potri.006G134000 Populus trichocarpa HOM05D007476 ORTHO05D006998 8.1e-14 81.6 153 52.3
Glyma.03G176200 Glycine max HOM05D007476 ORTHO05D006998 1.1e-13 81.3 190 46.8
Sc20g0004220 Simmondsia chinensis HOM05D007476 ORTHO05D006998 1.1e-13 81.3 92 72.8
PGSC0003DMG400002015 Solanum tuberosum HOM05D007476 ORTHO05D006998 3.1e-13 79.7 191 46.6
EL10Ac7g17261 Beta vulgaris HOM05D007476 ORTHO05D006998 6.9e-13 78.6 159 47.8
arahy.Tifrunner.gnm1.ann1.KRM1EW Arachis hypogaea HOM05D007476 ORTHO05D006998 9.0e-13 78.2 135 54.8
AL6G12020 Arabidopsis lyrata HOM05D010138 ORTHO05D006998 1.2e-12 77.8 226 44.7
Oeu026075.1 Olea europaea HOM05D007476 ORTHO05D006998 1.5e-12 77.4 198 44.9
AT5G02770 Arabidopsis thaliana HOM05D010138 ORTHO05D006998 2.0e-12 77.0 140 44.3
CSS0046323 Camellia sinensis var. sinensis HOM05D007476 ORTHO05D006998 2.0e-12 77.0 191 47.6
Nitab4.5_0000754g0030 Nicotiana tabacum HOM05D007476 ORTHO05D006998 2.0e-12 77.0 190 48.4
Sopen09g001950 Solanum pennellii HOM05D007476 ORTHO05D006998 4.5e-12 75.9 190 45.8
TWI74G1466 Tripterygium wilfordii HOM05D007476 ORTHO05D006998 4.5e-12 75.9 160 48.8
FvH4_6g14930 Fragaria vesca HOM05D007476 ORTHO05D006998 5.8e-12 75.5 177 48.6
HanXRQChr14g0453431 Helianthus annuus HOM05D007476 ORTHO05D006998 7.6e-12 75.1 160 49.4
Glyma.19G176700 Glycine max HOM05D007476 ORTHO05D006998 9.9e-12 74.7 140 52.9
Lj1g0005274 Lotus japonicus HOM05D007476 ORTHO05D006998 9.9e-12 74.7 138 54.3
Carub.0006s0153 Capsella rubella HOM05D010138 ORTHO05D006998 2.2e-11 73.6 198 45.5
CARHR210610 Cardamine hirsuta HOM05D010138 ORTHO05D006998 2.2e-11 73.6 196 48.5
AUR62042912 Chenopodium quinoa HOM05D007476 ORTHO05D006998 2.9e-11 73.2 199 44.7
Solyc09g007090.4 Solanum lycopersicum HOM05D007476 ORTHO05D006998 2.9e-11 73.2 194 45.9
Hma1.2p1_0111F.1_g053570 Hydrangea macrophylla HOM05D007476 ORTHO05D006998 3.8e-11 72.8 201 48.8
Actinidia05282 Actinidia chinensis HOM05D007476 ORTHO05D006998 6.4e-11 72.0 196 48.5
Migut.J00397 Erythranthe guttata HOM05D020465 ORTHO05D006998 6.4e-11 72.0 155 49.7
Sc01g0003710 Simmondsia chinensis HOM05D007476 ORTHO05D006998 1.1e-10 71.2 194 45.4
TAR375G0914 Trochodendron aralioides HOM05D000137 ORTHO05D000382 1.1e-10 71.2 76 57.9
Thhalv10014656m.g Eutrema salsugineum HOM05D010138 ORTHO05D006998 1.4e-10 70.9 108 45.4
BcaB05g21871 Brassica carinata HOM05D010138 ORTHO05D006998 1.9e-10 70.5 192 42.2
FAN14G0122 Fragaria x ananassa HOM05D007476 ORTHO05D006998 1.9e-10 70.5 190 46.3
MELO3C003078.2 Cucumis melo HOM05D023083 ORTHO05D006998 4.2e-10 69.3 188 45.2
TWI53G1272 Tripterygium wilfordii HOM05D007476 ORTHO05D006998 7.1e-10 68.6 130 48.5
Lalb_Chr25g0289331 Lupinus albus HOM05D007476 ORTHO05D006998 9.3e-10 68.2 147 48.3
PGR004G1949 Punica granatum HOM05D007476 ORTHO05D006998 9.3e-10 68.2 196 43.9
BraA02t04729Z Brassica rapa HOM05D010138 ORTHO05D006998 1.6e-09 67.4 156 47.4
CsaV3_4G024450 Cucumis sativus L. HOM05D023083 ORTHO05D006998 2.1e-09 67.0 166 44.6
ClCG04G008710 Citrullus lanatus HOM05D023083 ORTHO05D006998 2.7e-09 66.6 189 43.9
Nitab4.5_0002073g0060 Nicotiana tabacum HOM05D000217 ORTHO05D000121 3.5e-09 66.2 157 51.6
Aa31LG1G22120 Aethionema arabicum HOM05D010138 ORTHO05D006998 4.6e-09 65.9 197 42.6
Sp6g39810 Schrenkiella parvula HOM05D010138 ORTHO05D006998 6.0e-09 65.5 195 39.0
PGSC0003DMG400017597 Solanum tuberosum HOM05D000217 ORTHO05D000121 7.9e-09 65.1 161 42.2
BolC7t43445H Brassica oleracea HOM05D001366 ORTHO05D008529 1.0e-08 64.7 49 65.3
FAN09G1326 Fragaria x ananassa HOM05D007476 ORTHO05D006998 1.0e-08 64.7 175 46.3
HanXRQChr07g0195971 Helianthus annuus HOM05D007476 ORTHO05D006998 1.0e-08 64.7 119 52.1
BcaNung03275 Brassica carinata HOM05D010138 ORTHO05D006998 1.3e-08 64.3 150 46.7
C09p73910 Brassica napus HOM05D010138 ORTHO05D006998 1.3e-08 64.3 171 45.0
PSO384G1224 Papaver somniferum HOM05D052811 ORTHO05D006998 1.8e-08 63.9 166 45.2
PSO699G0016 Papaver somniferum HOM05D052811 ORTHO05D006998 1.8e-08 63.9 166 45.2
Nn2g12939 Nelumbo nucifera HOM05D007476 ORTHO05D006998 2.3e-08 63.5 190 44.7
TPR.G21469 Trifolium pratense HOM05D007476 ORTHO05D006998 2.3e-08 63.5 161 44.1
CDE02G0064 Ceratophyllum demersum HOM05D007476 ORTHO05D006998 3.0e-08 63.2 61 57.4
Peaxi162Scf00597g00826 Petunia axillaris HOM05D007476 ORTHO05D006998 3.0e-08 63.2 195 43.6
Ah.08g212030 Amaranthus hybridus HOM05D007476 ORTHO05D006998 3.9e-08 62.8 115 49.6
Ca_08810_v3 Cicer arietinum L. HOM05D007476 ORTHO05D006998 3.9e-08 62.8 189 41.8
Cpa.g.sc114.33 Carica papaya HOM05D007476 ORTHO05D006998 8.7e-08 61.6 195 42.1
Sabra06G0105300 Salix brachista HOM05D007476 ORTHO05D006998 1.1e-07 61.2 273 27.8
CDE09G0878 Ceratophyllum demersum HOM05D007476 ORTHO05D006998 1.9e-07 60.5 79 68.4
BcaC03g13046 Brassica carinata HOM05D010138 ORTHO05D006998 5.6e-07 58.9 157 47.1
BolC2t06059H Brassica oleracea HOM05D010138 ORTHO05D006998 5.6e-07 58.9 157 47.1
ClCG10G020700 Citrullus lanatus HOM05D029433 ORTHO05D028973 9.6e-07 58.2 144 40.3
DCAR_020869 Daucus carota HOM05D007476 ORTHO05D006998 1.3e-06 57.8 44 65.9
Nn2g10585 Nelumbo nucifera HOM05D007476 ORTHO05D006998 1.6e-06 57.4 187 44.9
Oeu060068.2 Olea europaea HOM05D007476 ORTHO05D025237 1.6e-06 57.4 177 37.9
Psat3g047760 Pisum sativum HOM05D007476 ORTHO05D006998 2.1e-06 57.0 189 41.3
TAR623G1098 Trochodendron aralioides HOM05D007476 ORTHO05D006998 2.8e-06 56.6 180 46.1
ATR0594G200 Amborella trichopoda HOM05D007476 ORTHO05D006998 4.8e-06 55.8 55 58.2
COL.COLO4_21973 Corchorus olitorius HOM05D007476 ORTHO05D006998 4.8e-06 55.8 147 34.7
Actinidia19729 Actinidia chinensis HOM05D007476 ORTHO05D006998 6.2e-06 55.5 71 53.5
C07p29060 Brassica napus HOM05D001366 ORTHO05D008529 6.2e-06 55.5 49 57.1


User provided reference genes

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