Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib093G0910 Durio zibethinus HOM05D003899 ORTHO05D003655 3.9e-65 251.9 190 100.0
Duzib041G0166 Durio zibethinus HOM05D003899 ORTHO05D003655 6.7e-33 144.8 191 56.0
Thecc.08G144600 Theobroma cacao HOM05D003899 ORTHO05D003655 4.8e-31 138.7 191 56.0
Gohir.A02G066500 Gossypium hirsutum HOM05D003899 ORTHO05D003655 6.7e-25 118.2 196 52.6
Gorai.005G081600 Gossypium raimondii HOM05D003899 ORTHO05D003655 1.9e-24 116.7 205 54.1
Gohir.D02G072400 Gossypium hirsutum HOM05D003899 ORTHO05D003655 8.2e-23 111.3 206 57.3
COL.COLO4_08943 Corchorus olitorius HOM05D003899 ORTHO05D003655 2.4e-22 109.8 96 67.7
Dinv24330 Davidia involucrata HOM05D003899 ORTHO05D003655 1.4e-17 94.0 85 51.8
Dinv25809 Davidia involucrata HOM05D003899 ORTHO05D003655 3.3e-16 89.4 73 58.9
Nn1g06205 Nelumbo nucifera HOM05D003899 ORTHO05D003655 4.3e-16 89.0 85 52.9
Nn5g28622 Nelumbo nucifera HOM05D003899 ORTHO05D003655 9.7e-16 87.8 78 55.1
TAR381G0487 Trochodendron aralioides HOM05D003899 ORTHO05D003655 1.3e-15 87.4 85 54.1
Cfa018365 Carpinus fangiana HOM05D003899 ORTHO05D003655 2.8e-15 86.3 87 52.9
Dinv41123 Davidia involucrata HOM05D000043 ORTHO05D002577 1.8e-14 83.6 84 50.0
Manes.18G087500 Manihot esculenta HOM05D003899 ORTHO05D003655 1.8e-14 83.6 85 51.8
Haze_17704 Corylus avellana HOM05D003899 ORTHO05D003655 6.9e-14 81.6 87 50.6
ClCG08G006450 Citrullus lanatus HOM05D000058 ORTHO05D000077 3.4e-13 79.3 82 48.8
Thecc.01G128000 Theobroma cacao HOM05D003899 ORTHO05D003655 3.4e-13 79.3 86 43.0
CANSAT11G1227 Cannabis sativa HOM05D003899 ORTHO05D003655 4.5e-13 79.0 74 48.6
Oeu030532.1 Olea europaea HOM05D003899 ORTHO05D003655 4.5e-13 79.0 79 46.8
DCAR_001362 Daucus carota HOM05D003899 ORTHO05D003655 1.0e-12 77.8 86 47.7
Dinv03732 Davidia involucrata HOM05D000043 ORTHO05D002577 1.3e-12 77.4 88 44.3
Actinidia06640 Actinidia chinensis HOM05D003899 ORTHO05D003655 2.2e-12 76.6 85 47.1
Lj2C604T4 Lonicera japonica HOM05D003899 ORTHO05D003655 2.9e-12 76.3 77 45.5
CiPaw.15G021500 Carya illinoinensis HOM05D003899 ORTHO05D003655 3.8e-12 75.9 84 53.6
Lj2C604T3 Lonicera japonica HOM05D003899 ORTHO05D003655 3.8e-12 75.9 79 43.0
MBI06_g43012_MAGBIO Magnolia biondii HOM05D003899 ORTHO05D003655 3.8e-12 75.9 75 49.3
Atru.chr13.1710 Acer truncatum HOM05D003899 ORTHO05D003655 5.0e-12 75.5 89 49.4
CSS0023777 Camellia sinensis var. sinensis HOM05D003899 ORTHO05D003655 5.0e-12 75.5 79 50.6
Phvul.001G052300 Phaseolus vulgaris HOM05D003899 ORTHO05D003655 5.0e-12 75.5 96 42.7
TWI32G0122 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 6.5e-12 75.1 184 40.2
Nitab4.5_0015327g0010 Nicotiana tabacum HOM05D003899 ORTHO05D003655 8.5e-12 74.7 81 50.6
Cpa.g.sc42.130 Carica papaya HOM05D003899 ORTHO05D003655 1.4e-11 73.9 86 46.5
Potri.007G108100 Populus trichocarpa HOM05D003899 ORTHO05D003655 1.4e-11 73.9 86 45.3
CiPaw.16G017800 Carya illinoinensis HOM05D003899 ORTHO05D003655 1.9e-11 73.6 88 44.3
Aqoxy3G00817 Aquilegia oxysepala HOM05D003899 ORTHO05D003655 3.2e-11 72.8 89 43.8
CANSAT25G0207 Cannabis sativa HOM05D003899 ORTHO05D003655 3.2e-11 72.8 87 42.5
Cpa.g.sc49.66 Carica papaya HOM05D003899 ORTHO05D003655 3.2e-11 72.8 88 44.3
Potri.005G060700 Populus trichocarpa HOM05D003899 ORTHO05D003655 3.2e-11 72.8 87 46.0
CsaV3_6G030980 Cucumis sativus L. HOM05D003899 ORTHO05D003655 4.2e-11 72.4 71 47.9
FvH4_2g14670 Fragaria vesca HOM05D003899 ORTHO05D003655 4.2e-11 72.4 53 64.2
FAN24G0119 Fragaria x ananassa HOM05D003899 ORTHO05D003655 4.2e-11 72.4 53 64.2
MELO3C027328.2 Cucumis melo HOM05D003899 ORTHO05D003655 5.5e-11 72.0 63 50.8
Nitab4.5_0002974g0030 Nicotiana tabacum HOM05D003899 ORTHO05D003655 5.5e-11 72.0 79 45.6
QL02p025320 Quercus lobata HOM05D003899 ORTHO05D003655 7.2e-11 71.6 85 45.9
TWI60G1060 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 7.2e-11 71.6 86 51.2
Peaxi162Scf00263g00033 Petunia axillaris HOM05D003899 ORTHO05D003655 9.4e-11 71.2 77 49.4
Sed0026893 Sechium edule HOM05D003899 ORTHO05D003655 1.2e-10 70.9 91 40.7
RcHm_v2.0_Chr6g0277141 Rosa chinensis HOM05D003899 ORTHO05D003655 1.6e-10 70.5 52 61.5
QL02p025328 Quercus lobata HOM05D003899 ORTHO05D003655 2.1e-10 70.1 83 45.8
Gorai.003G068900 Gossypium raimondii HOM05D003899 ORTHO05D003655 2.7e-10 69.7 73 47.9
Gohir.D11G228940 Gossypium hirsutum HOM05D003899 ORTHO05D003655 3.6e-10 69.3 73 46.6
FAN20G0153 Fragaria x ananassa HOM05D003899 ORTHO05D003655 4.7e-10 68.9 64 53.1
Hma1.2p1_0528F.1_g173010 Hydrangea macrophylla HOM05D003899 ORTHO05D003655 4.7e-10 68.9 69 46.4
Ca_12820_v3 Cicer arietinum L. HOM05D003899 ORTHO05D003655 6.1e-10 68.6 91 47.3
Gohir.A11G224804 Gossypium hirsutum HOM05D003899 ORTHO05D003655 7.9e-10 68.2 73 45.2
Manes.12G153900 Manihot esculenta HOM05D003899 ORTHO05D003655 7.9e-10 68.2 88 45.5
COL.COLO4_14024 Corchorus olitorius HOM05D003899 ORTHO05D003655 1.0e-09 67.8 88 43.2
Prupe.8G018800 Prunus persica HOM05D003899 ORTHO05D003655 1.0e-09 67.8 51 56.9
Rhsim10G0136200 Rhododendron simsii HOM05D003899 ORTHO05D003655 1.0e-09 67.8 90 40.0
RhsimUnG0132700 Rhododendron simsii HOM05D003899 ORTHO05D003655 1.0e-09 67.8 90 40.0
THA.LOC104806849 Tarenaya hassleriana HOM05D003899 ORTHO05D003655 1.0e-09 67.8 75 42.7
TWI79G1413 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 1.0e-09 67.8 77 41.6
Nn5g28623 Nelumbo nucifera HOM05D003899 ORTHO05D003655 1.4e-09 67.4 80 42.5
Sabra07G0088500 Salix brachista HOM05D000850 ORTHO05D000266 1.4e-09 67.4 87 44.8
MD05G1014900 Malus domestica HOM05D003899 ORTHO05D003655 1.8e-09 67.0 51 58.8
Glyma.14G121800 Glycine max HOM05D003899 ORTHO05D003655 3.0e-09 66.2 64 54.7
Atru.chr4.839 Acer truncatum HOM05D003899 ORTHO05D003655 3.9e-09 65.9 87 39.1
MD10G1014900 Malus domestica HOM05D003899 ORTHO05D003655 3.9e-09 65.9 51 56.9
Nitab4.5_0000299g0020 Nicotiana tabacum HOM05D003899 ORTHO05D003655 3.9e-09 65.9 78 47.4
FAN15G3500 Fragaria x ananassa HOM05D003899 ORTHO05D003655 5.1e-09 65.5 48 64.6
Nitab4.5_0008388g0020 Nicotiana tabacum HOM05D003899 ORTHO05D003655 5.1e-09 65.5 80 47.5
Nitab4.5_0004770g0030 Nicotiana tabacum HOM05D003899 ORTHO05D003655 6.7e-09 65.1 84 45.2
Phvul.001G073300 Phaseolus vulgaris HOM05D003899 ORTHO05D003655 6.7e-09 65.1 61 50.8
THA.LOC104800071 Tarenaya hassleriana HOM05D003899 ORTHO05D003655 6.7e-09 65.1 85 40.0
Lalb_Chr23g0271351 Lupinus albus HOM05D003899 ORTHO05D003655 8.8e-09 64.7 83 42.2
Nitab4.5_0001140g0230 Nicotiana tabacum HOM05D003899 ORTHO05D003655 8.8e-09 64.7 78 46.2
Glyma.14G122000 Glycine max HOM05D003899 ORTHO05D003655 1.1e-08 64.3 63 50.8
Lalb_Chr25g0281721 Lupinus albus HOM05D003899 ORTHO05D003655 1.1e-08 64.3 60 50.0
Psat6g039960 Pisum sativum HOM05D003899 ORTHO05D003655 1.1e-08 64.3 76 43.4
Lj1g0026176 Lotus japonicus HOM05D003899 ORTHO05D003655 1.5e-08 63.9 72 45.8
C07p00500 Brassica napus HOM05D003899 ORTHO05D003655 2.0e-08 63.5 58 51.7
PGSC0003DMG400030777 Solanum tuberosum HOM05D003899 ORTHO05D003655 2.0e-08 63.5 72 45.8
TPR.G33315 Trifolium pratense HOM05D003899 ORTHO05D003655 3.3e-08 62.8 81 44.4
CAN.G375.87 Capsicum annuum HOM05D003899 ORTHO05D003655 4.4e-08 62.4 55 54.5
BcaC06g36741 Brassica carinata HOM05D003899 ORTHO05D003655 5.7e-08 62.0 58 50.0
BolC7t40496H Brassica oleracea HOM05D003899 ORTHO05D003655 5.7e-08 62.0 58 50.0
QL06p029227 Quercus lobata HOM05D003899 ORTHO05D003655 5.7e-08 62.0 86 38.4
CAN.G833.2 Capsicum annuum HOM05D003899 ORTHO05D003655 7.4e-08 61.6 60 46.7
Medtr1g029140 Medicago truncatula HOM05D003899 ORTHO05D003655 9.7e-08 61.2 99 38.4
HanXRQChr04g0125201 Helianthus annuus HOM05D003899 ORTHO05D003655 1.3e-07 60.8 83 43.4
Migut.M00600 Erythranthe guttata HOM05D003899 ORTHO05D003655 1.7e-07 60.5 84 38.1
Aqoxy5G02188 Aquilegia oxysepala HOM05D003899 ORTHO05D003655 2.8e-07 59.7 54 50.0
MSTRG.1375 Avicennia marina HOM05D003899 ORTHO05D003655 2.8e-07 59.7 88 38.6
CSS0000461 Camellia sinensis var. sinensis HOM05D003899 ORTHO05D003655 3.7e-07 59.3 70 51.4
Migut.N03236 Erythranthe guttata HOM05D003899 ORTHO05D003655 3.7e-07 59.3 77 44.2
Sopen07g030130 Solanum pennellii HOM05D003899 ORTHO05D003655 3.7e-07 59.3 76 43.4
arahy.Tifrunner.gnm1.ann1.UE47UQ Arachis hypogaea HOM05D003899 ORTHO05D003655 4.8e-07 58.9 81 39.5
BcaB07g33974 Brassica carinata HOM05D003899 ORTHO05D003655 4.8e-07 58.9 50 52.0
CAN.G833.1 Capsicum annuum HOM05D003899 ORTHO05D003655 4.8e-07 58.9 60 43.3
ECA238G1798 Erigeron canadensis HOM05D003899 ORTHO05D003655 6.3e-07 58.5 82 42.7
Thhalv10012331m.g Eutrema salsugineum HOM05D003899 ORTHO05D003655 6.3e-07 58.5 50 50.0
Potri.002G072000 Populus trichocarpa HOM05D003899 ORTHO05D003655 6.3e-07 58.5 88 42.0
Sc02g0004420 Simmondsia chinensis HOM05D003899 ORTHO05D003655 6.3e-07 58.5 59 42.4
VMungo0647G2071 Vigna mungo HOM05D003899 ORTHO05D003655 6.3e-07 58.5 62 43.5
BcaB03g16849 Brassica carinata HOM05D003899 ORTHO05D003655 8.2e-07 58.2 57 45.6
PGSC0003DMG400030778 Solanum tuberosum HOM05D003899 ORTHO05D003655 8.2e-07 58.2 63 42.9
Ciclev10003780m.g Citrus clementina HOM05D003899 ORTHO05D003655 1.1e-06 57.8 87 36.8
ECA246G5022 Erigeron canadensis HOM05D003899 ORTHO05D003655 1.1e-06 57.8 58 46.6
Medtr1g008620 Medicago truncatula HOM05D003899 ORTHO05D003655 1.1e-06 57.8 75 40.0
Medtr1g008675 Medicago truncatula HOM05D003899 ORTHO05D003655 1.4e-06 57.4 85 40.0
BcaC08g42822 Brassica carinata HOM05D003899 ORTHO05D003655 1.8e-06 57.0 50 50.0
A10p07750 Brassica napus HOM05D003899 ORTHO05D003655 1.8e-06 57.0 50 50.0
C06p00330 Brassica napus HOM05D003899 ORTHO05D003655 1.8e-06 57.0 50 50.0
BolC6t35162H Brassica oleracea HOM05D003899 ORTHO05D003655 1.8e-06 57.0 50 50.0
BraSC36t46027Z Brassica rapa HOM05D003899 ORTHO05D003655 1.8e-06 57.0 50 50.0
DCAR_007049 Daucus carota HOM05D003899 ORTHO05D003655 1.8e-06 57.0 87 42.5
PGSC0003DMG400027629 Solanum tuberosum HOM05D003899 ORTHO05D003655 1.8e-06 57.0 69 47.8
TPR.G12083 Trifolium pratense HOM05D003899 ORTHO05D003655 1.8e-06 57.0 86 43.0
Nn1g06203 Nelumbo nucifera HOM05D003899 ORTHO05D003655 3.1e-06 56.2 51 54.9
BraA07t27814Z Brassica rapa HOM05D003899 ORTHO05D003655 5.3e-06 55.5 56 42.9
PSO170G2020 Papaver somniferum HOM05D003899 ORTHO05D003655 5.3e-06 55.5 93 36.6
PGR002G0009 Punica granatum HOM05D003899 ORTHO05D003655 5.3e-06 55.5 38 65.8
PGR044G0858 Punica granatum HOM05D003899 ORTHO05D003655 5.3e-06 55.5 38 65.8
PGSC0003DMG400024810 Solanum tuberosum HOM05D003899 ORTHO05D003655 7.0e-06 55.1 75 40.0
Thhalv10012251m.g Eutrema salsugineum HOM05D003899 ORTHO05D003655 9.1e-06 54.7 67 40.3
PGSC0003DMG400001039 Solanum tuberosum HOM05D003899 ORTHO05D003655 9.1e-06 54.7 51 52.9


User provided reference genes

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