Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 4.1e-173 611.3 306 100.0
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 3.3e-143 511.9 304 86.2
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 1.0e-139 500.4 304 84.5
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 3.8e-139 498.4 304 84.2
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 1.9e-138 496.1 304 84.2
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 2.7e-137 492.3 304 81.9
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 1.8e-112 409.8 301 71.1
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 1.2e-105 387.1 307 68.1
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 4.4e-103 378.6 305 69.8
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 2.1e-100 369.8 305 67.9
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 2.1e-97 359.8 312 67.3
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 8.9e-96 354.4 305 67.2
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 3.4e-95 352.4 311 66.2
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 1.3e-94 350.5 304 65.5
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 2.2e-94 349.7 301 64.5
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 3.8e-94 349.0 315 61.3
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 1.1e-93 347.4 309 64.4
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 1.2e-92 344.0 308 61.0
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 1.2e-92 344.0 306 63.7
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 1.6e-92 343.6 312 65.7
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 4.6e-92 342.0 302 63.2
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 4.6e-92 342.0 313 62.9
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 3.9e-91 339.0 297 64.0
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 3.9e-91 339.0 301 65.1
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 6.6e-91 338.2 312 61.9
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 8.7e-91 337.8 308 62.0
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 1.1e-90 337.4 297 62.6
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 9.6e-90 334.3 305 62.3
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 2.8e-89 332.8 306 63.4
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 1.1e-88 330.9 303 61.1
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 2.4e-88 329.7 309 60.2
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 2.4e-88 329.7 305 63.9
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 2.0e-87 326.6 312 61.2
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 9.9e-87 324.3 317 59.6
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 1.3e-86 323.9 308 58.4
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 4.9e-86 322.0 295 61.7
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 1.4e-85 320.5 313 59.7
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 1.9e-85 320.1 320 60.3
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 1.9e-85 320.1 295 64.1
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 2.4e-85 319.7 301 60.5
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 4.2e-85 318.9 351 54.4
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 4.2e-85 318.9 312 60.3
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 7.1e-85 318.2 357 53.8
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 2.7e-84 316.2 312 59.3
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 2.7e-84 316.2 312 59.9
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 2.7e-84 316.2 312 59.6
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 4.6e-84 315.5 318 59.1
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 7.8e-84 314.7 312 60.9
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 7.8e-84 314.7 311 59.5
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 1.3e-83 313.9 315 60.3
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 2.3e-83 313.2 323 58.2
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 1.1e-82 310.8 307 59.6
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 5.6e-82 308.5 308 57.1
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 2.1e-81 306.6 298 60.7
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 2.1e-81 306.6 298 60.7
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 3.6e-81 305.8 288 62.2
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 4.8e-81 305.4 359 52.4
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 6.2e-81 305.1 298 60.4
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 4.0e-80 302.4 299 60.9
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 1.2e-79 300.8 314 55.4
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 1.2e-79 300.8 286 60.8
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 3.4e-79 299.3 326 57.1
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 5.8e-79 298.5 334 53.9
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 5.8e-79 298.5 304 56.9
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 2.2e-78 296.6 298 59.4
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 2.2e-78 296.6 298 59.4
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 3.8e-78 295.8 401 47.1
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 6.4e-78 295.0 340 54.7
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 1.9e-77 293.5 307 54.7
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 2.7e-76 289.7 306 56.9
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 6.0e-76 288.5 303 55.1
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 6.0e-76 288.5 330 54.8
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 7.9e-76 288.1 291 57.4
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 1.8e-75 287.0 290 59.0
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 3.9e-75 285.8 323 55.1
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 8.7e-75 284.6 305 52.8
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 1.6e-73 280.4 314 57.0
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 4.8e-73 278.9 300 56.7
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 6.2e-73 278.5 299 54.8
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 8.1e-73 278.1 300 53.7
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 6.9e-72 275.0 282 58.9
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 2.0e-71 273.5 288 56.2
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 4.5e-71 272.3 250 61.2
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 7.6e-71 271.6 301 54.5
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 2.2e-62 243.4 294 48.0
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 1.9e-61 240.4 128 88.3
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 4.3e-58 229.2 312 49.7
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 8.2e-57 224.9 255 54.9
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 1.1e-56 224.6 324 46.9
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.0e-54 218.0 109 90.8
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 6.1e-52 208.8 109 89.9
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 2.3e-51 206.8 289 49.5
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 7.4e-50 201.8 280 43.9
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 1.3e-49 201.1 111 83.8
Cpa.g.sc188.15 Carica papaya HOM05D006626 ORTHO05D007352 3.4e-47 193.0 207 58.0
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 3.4e-47 193.0 98 90.8
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 1.4e-45 187.6 291 44.0
Dinv35614 Davidia involucrata HOM05D006626 ORTHO05D007352 2.5e-45 186.8 214 56.5
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 1.6e-44 184.1 98 88.8
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 3.6e-44 183.0 98 88.8
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 7.9e-44 181.8 137 62.0
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 6.3e-41 172.2 92 85.9
AL614U10010 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 2.0e-39 167.2 209 53.1
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 2.6e-39 166.8 130 70.8
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 2.2e-38 163.7 124 61.3
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 9.4e-37 158.3 98 79.6
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 3.9e-35 152.9 98 72.4
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 2.0e-31 140.6 200 52.0
Psat3g141480 Pisum sativum HOM05D006626 ORTHO05D007352 5.0e-30 136.0 226 45.6
Aa31sc161G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 1.3e-25 121.3 197 42.6
Nitab4.5_0027058g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 5.0e-22 109.4 207 44.0
MD02G1131100 Malus domestica HOM05D006626 ORTHO05D007352 1.3e-17 94.7 107 52.3
AUR62042107 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.7e-17 94.4 200 37.0
MD05G1218700 Malus domestica HOM05D006626 ORTHO05D007352 1.7e-17 94.4 107 52.3
MD16G1182100 Malus domestica HOM05D006626 ORTHO05D007352 1.7e-17 94.4 107 52.3
MD15G1437500 Malus domestica HOM05D006626 ORTHO05D007352 3.7e-17 93.2 104 51.0
AUR62040983 Chenopodium quinoa HOM05D006626 ORTHO05D007352 2.3e-14 84.0 205 34.6
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 2.5e-13 80.5 82 53.7
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 7.2e-13 79.0 41 87.8
arahy.Tifrunner.gnm1.ann1.9RDP1W Arachis hypogaea HOM05D003961 ORTHO05D007352 3.4e-10 70.1 109 48.6
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 2.9e-09 67.0 44 68.2
arahy.Tifrunner.gnm1.ann1.MM579M Arachis hypogaea HOM05D001890 ORTHO05D003442 5.4e-08 62.8 110 43.6


User provided reference genes

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