Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib093G0843 Durio zibethinus HOM05D006207 ORTHO05D007868 2.7e-172 608.6 311 100.0
Thecc.05G007100 Theobroma cacao HOM05D006207 ORTHO05D007868 1.5e-146 523.1 311 86.8
Gohir.A09G167800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 1.5e-143 513.1 311 86.5
Gorai.006G185200 Gossypium raimondii HOM05D006207 ORTHO05D007868 9.9e-143 510.4 311 85.5
Gohir.D01G219700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 2.9e-142 508.8 311 84.6
Gorai.002G266400 Gossypium raimondii HOM05D006207 ORTHO05D007868 1.9e-141 506.1 311 84.2
Gohir.A01G229800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 5.4e-141 504.6 311 83.9
Gohir.D09G163700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 3.5e-140 501.9 311 85.2
Duzib106G1231 Durio zibethinus HOM05D006207 ORTHO05D007868 9.6e-138 493.8 293 86.3
COL.COLO4_14454 Corchorus olitorius HOM05D006207 ORTHO05D007868 4.8e-137 491.5 313 83.7
Manes.09G111300 Manihot esculenta HOM05D006207 ORTHO05D007868 2.2e-105 386.3 311 66.9
Ciclev10012309m.g Citrus clementina HOM05D006207 ORTHO05D007868 6.7e-99 364.8 311 60.1
Cpa.g.sc5.234 Carica papaya HOM05D006207 ORTHO05D007868 1.0e-94 350.9 317 62.1
CsaV3_4G026760 Cucumis sativus L. HOM05D006207 ORTHO05D007868 3.2e-93 345.9 325 59.4
CiPaw.09G215000 Carya illinoinensis HOM05D006207 ORTHO05D007868 9.4e-93 344.4 318 61.3
MELO3C026025.2 Cucumis melo HOM05D006207 ORTHO05D007868 3.6e-92 342.4 323 58.8
CANSAT35G0048 Cannabis sativa HOM05D006207 ORTHO05D007868 5.2e-91 338.6 318 57.5
ClCG04G006690 Citrullus lanatus HOM05D006207 ORTHO05D007868 2.0e-90 336.7 321 57.9
Sed0003544 Sechium edule HOM05D006207 ORTHO05D007868 2.6e-90 336.3 319 58.9
Atru.chr8.2331 Acer truncatum HOM05D006207 ORTHO05D007868 1.7e-89 333.6 324 57.1
Actinidia29070 Actinidia chinensis HOM05D006207 ORTHO05D007868 1.3e-86 323.9 317 54.9
GSVIVG01030275001 Vitis vinifera HOM05D006207 ORTHO05D002478 1.2e-84 317.4 309 58.6
RcHm_v2.0_Chr3g0461671 Rosa chinensis HOM05D006207 ORTHO05D007868 1.6e-84 317.0 314 55.7
TAR623G0507 Trochodendron aralioides HOM05D006207 ORTHO05D007868 1.6e-84 317.0 313 56.9
Lj3g0024527 Lotus japonicus HOM05D006207 ORTHO05D007868 2.1e-84 316.6 314 56.4
THA.LOC104823306 Tarenaya hassleriana HOM05D006207 ORTHO05D007868 2.1e-84 316.6 317 57.4
CSS0029336 Camellia sinensis var. sinensis HOM05D006207 ORTHO05D007868 3.6e-84 315.8 320 55.3
BolC5t34558H Brassica oleracea HOM05D006207 ORTHO05D007868 1.4e-83 313.9 313 54.6
Actinidia11552 Actinidia chinensis HOM05D006207 ORTHO05D007868 1.8e-83 313.5 315 55.6
Prupe.6G284500 Prunus persica HOM05D006207 ORTHO05D007868 1.8e-83 313.5 319 56.4
C05p59060 Brassica napus HOM05D006207 ORTHO05D007868 2.3e-83 313.2 314 54.1
TWI53G1221 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 2.3e-83 313.2 309 56.3
QL07p033964 Quercus lobata HOM05D006207 ORTHO05D007868 4.0e-83 312.4 325 52.6
Glyma.01G125600 Glycine max HOM05D006207 ORTHO05D007868 6.8e-83 311.6 317 56.2
Phvul.010G064400 Phaseolus vulgaris HOM05D006207 ORTHO05D007868 8.8e-83 311.2 320 54.1
Dinv35401 Davidia involucrata HOM05D006207 ORTHO05D007868 1.2e-82 310.8 321 54.2
TWI74G1498 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 1.5e-82 310.5 310 57.1
Lalb_Chr12g0207271 Lupinus albus HOM05D006207 ORTHO05D007868 2.6e-82 309.7 318 55.7
Aa31LG5G18780 Aethionema arabicum HOM05D006207 ORTHO05D007868 5.7e-82 308.5 298 56.0
TAR633G0541 Trochodendron aralioides HOM05D006207 ORTHO05D007868 7.5e-82 308.1 312 55.8
PGR031G0899 Punica granatum HOM05D006207 ORTHO05D007868 9.7e-82 307.8 309 55.7
AL3G19780 Arabidopsis lyrata HOM05D006207 ORTHO05D007868 1.3e-81 307.4 310 55.5
Thhalv10021171m.g Eutrema salsugineum HOM05D006207 ORTHO05D007868 2.2e-81 306.6 311 53.7
Glyma.U032705 Glycine max HOM05D006207 ORTHO05D007868 2.2e-81 306.6 319 55.2
A05p40020 Brassica napus HOM05D006207 ORTHO05D007868 6.3e-81 305.1 313 53.7
AT3G08780 Arabidopsis thaliana HOM05D006207 ORTHO05D007868 1.4e-80 303.9 311 55.0
arahy.Tifrunner.gnm1.ann1.S95MPE Arachis hypogaea HOM05D006207 ORTHO05D007868 1.8e-80 303.5 341 52.5
BraA05t22911Z Brassica rapa HOM05D006207 ORTHO05D007868 2.4e-80 303.1 314 53.2
Sp3g07200 Schrenkiella parvula HOM05D006207 ORTHO05D007868 4.1e-80 302.4 312 54.5
CARHR083100 Cardamine hirsuta HOM05D006207 ORTHO05D007868 5.3e-80 302.0 306 53.6
Sed0019485 Sechium edule HOM05D006207 ORTHO05D007868 5.3e-80 302.0 324 54.0
arahy.Tifrunner.gnm1.ann1.WBCD4G Arachis hypogaea HOM05D006207 ORTHO05D007868 2.0e-79 300.1 342 52.0
Sabra16G0120700 Salix brachista HOM05D006207 ORTHO05D007868 2.0e-79 300.1 316 53.8
Carub.0003s0791 Capsella rubella HOM05D006207 ORTHO05D007868 3.5e-79 299.3 313 54.6
FAN05G5543 Fragaria x ananassa HOM05D006207 ORTHO05D007868 4.5e-79 298.9 316 54.4
FAN05G3975 Fragaria x ananassa HOM05D006207 ORTHO05D007868 5.9e-79 298.5 316 54.4
Dinv12164 Davidia involucrata HOM05D006207 ORTHO05D007868 7.7e-79 298.1 326 52.5
vmacro08907 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 7.7e-79 298.1 315 52.1
Aqoxy1G01290 Aquilegia oxysepala HOM05D006207 ORTHO05D007868 5.0e-78 295.4 333 51.7
Lsat_1_v5_gn_8_103441 Lactuca sativa HOM05D006207 ORTHO05D007868 4.2e-77 292.4 313 53.4
Nn2g11009 Nelumbo nucifera HOM05D006207 ORTHO05D007868 7.2e-77 291.6 301 54.2
Potri.016G126200 Populus trichocarpa HOM05D006207 ORTHO05D007868 7.2e-77 291.6 316 52.8
Psat7g249160 Pisum sativum HOM05D006207 ORTHO05D007868 9.4e-77 291.2 327 52.0
FvH4_6g10650 Fragaria vesca HOM05D006207 ORTHO05D007868 2.3e-75 286.6 314 52.9
FAN14G5611 Fragaria x ananassa HOM05D006207 ORTHO05D007868 2.3e-75 286.6 314 52.9
Cc06_g00770 Coffea canephora HOM05D006207 ORTHO05D002478 6.8e-75 285.0 317 51.7
FAN09G2678 Fragaria x ananassa HOM05D006207 ORTHO05D007868 3.4e-74 282.7 314 52.5
PGSC0003DMG400017108 Solanum tuberosum HOM05D006207 ORTHO05D007868 9.8e-74 281.2 325 48.9
CAN.G967.4 Capsicum annuum HOM05D006207 ORTHO05D007868 1.3e-73 280.8 318 49.1
Sopen09g008460 Solanum pennellii HOM05D006207 ORTHO05D007868 1.3e-73 280.8 325 48.9
VMungo0331G1865 Vigna mungo HOM05D006207 ORTHO05D007868 4.1e-72 275.8 305 51.8
Oeu057638.1 Olea europaea HOM05D006207 ORTHO05D007868 1.2e-71 274.2 304 48.7
Sc01g0005970 Simmondsia chinensis HOM05D006207 ORTHO05D007868 2.7e-71 273.1 313 48.9
Duzib128G0456 Durio zibethinus HOM05D006207 ORTHO05D007868 5.9e-71 271.9 180 79.4
Nitab4.5_0000230g0180 Nicotiana tabacum HOM05D006207 ORTHO05D007868 1.0e-70 271.2 304 49.7
Nitab4.5_0015157g0010 Nicotiana tabacum HOM05D006207 ORTHO05D007868 2.9e-70 269.6 305 49.5
Rhsim04G0125000 Rhododendron simsii HOM05D006207 ORTHO05D007868 3.8e-70 269.2 311 50.5
HanXRQChr16g0510291 Helianthus annuus HOM05D006207 ORTHO05D007868 1.1e-69 267.7 317 49.8
Oeu038722.1 Olea europaea HOM05D006207 ORTHO05D007868 2.1e-68 263.5 306 47.7
SHI12871 Sapria himalayana HOM05D006207 ORTHO05D007868 2.8e-68 263.1 302 50.0
EL10Ac5g12487 Beta vulgaris HOM05D006207 ORTHO05D007868 8.0e-68 261.5 309 50.2
TPR.G5270 Trifolium pratense HOM05D006207 ORTHO05D007868 1.8e-67 260.4 322 48.1
Peaxi162Scf00744g00339 Petunia axillaris HOM05D006207 ORTHO05D007868 1.2e-66 257.7 327 45.6
Migut.J00099 Erythranthe guttata HOM05D006207 ORTHO05D007868 3.4e-66 256.1 304 47.7
vmacro20324 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 7.5e-66 255.0 307 47.2
Cfa017117 Carpinus fangiana HOM05D006207 ORTHO05D007868 2.8e-65 253.1 299 49.5
CDE07G0940 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 3.9e-62 242.7 309 47.2
MSTRG.5544 Avicennia marina HOM05D006207 ORTHO05D007868 5.0e-62 242.3 305 45.6
BcaC05g29617 Brassica carinata HOM05D006207 ORTHO05D007868 1.9e-61 240.4 298 46.3
Medtr4g014250 Medicago truncatula HOM05D006207 ORTHO05D007868 1.6e-60 237.3 309 46.0
ECA236G5132 Erigeron canadensis HOM05D006207 ORTHO05D007868 3.6e-60 236.1 315 47.6
unitig_27.g24873 Utricularia gibba HOM05D006207 ORTHO05D007868 8.9e-59 231.5 304 45.4
DCAR_023998 Daucus carota HOM05D006207 ORTHO05D007868 3.4e-58 229.6 310 43.5
PSO765G0078 Papaver somniferum HOM05D006207 ORTHO05D007868 3.7e-57 226.1 317 42.3
Ah.12g059050 Amaranthus hybridus HOM05D006207 ORTHO05D007868 4.9e-57 225.7 297 46.1
MBI03_g07303_MAGBIO Magnolia biondii HOM05D006207 ORTHO05D007868 2.3e-54 216.9 305 44.9
CDE06G0694 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 1.1e-53 214.5 306 43.8
Lj2C67T4 Lonicera japonica HOM05D006207 ORTHO05D007868 4.7e-52 209.1 197 57.4
HPP92_019707 Vanilla planifolia HOM05D006207 ORTHO05D007868 4.0e-51 206.1 328 42.1
ATR0594G098 Amborella trichopoda HOM05D006207 ORTHO05D007868 2.2e-49 200.3 302 42.7
SEGI_14997 Sequoiadendron giganteum HOM05D006207 ORTHO05D007868 3.9e-46 189.5 390 33.6
Solyc09g015180.4 Solanum lycopersicum HOM05D006207 ORTHO05D007868 6.2e-44 182.2 250 42.4
Lj3P946T49 Lonicera japonica HOM05D006207 ORTHO05D007868 6.4e-41 172.2 187 52.4
Rhsim05G0225500 Rhododendron simsii HOM05D006207 ORTHO05D007868 8.3e-41 171.8 181 50.8
AUR62030762 Chenopodium quinoa HOM05D006207 ORTHO05D007868 3.6e-36 156.4 293 36.9
Pp3c3_16910 Physcomitrium patens HOM05D006207 ORTHO05D007868 8.1e-36 155.2 351 34.5
AUR62030533 Chenopodium quinoa HOM05D006207 ORTHO05D007868 2.3e-30 137.1 134 53.0
Zm00001eb163300 Zea mays HOM05D006207 ORTHO05D007868 3.0e-30 136.7 310 34.8
MD04G1166200 Malus domestica HOM05D006207 ORTHO05D007868 3.3e-29 133.3 162 48.8
Os07g0540200 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 4.3e-29 132.9 310 36.8
AagrBONN_evm.TU.Sc2ySwM_368.1939 Anthoceros agrestis HOM05D006207 ORTHO05D007868 2.0e-26 124.0 386 26.4
Os04g0479300 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 2.2e-25 120.6 303 32.3
CBR_g48858 Chara braunii HOM05D006207 ORTHO05D007868 1.4e-24 117.9 191 40.8
Ca_20352_v3 Cicer arietinum L. HOM05D006207 ORTHO05D007868 1.6e-23 114.4 97 61.9
MD04G1166100 Malus domestica HOM05D006207 ORTHO05D007868 1.0e-22 111.7 73 75.3
Zm00001eb421620 Zea mays HOM05D006207 ORTHO05D007868 4.0e-19 99.8 261 32.6
VMungo1215G0839 Vigna mungo HOM05D006207 ORTHO05D007868 4.3e-13 79.7 78 47.4
SalBow6G1507 Salvia bowleyana HOM05D000800 ORTHO05D000658 1.6e-12 77.8 100 41.0
SEGI_02198 Sequoiadendron giganteum HOM05D006207 ORTHO05D007868 5.8e-10 69.3 108 41.7
VMungo1309G1345 Vigna mungo HOM05D006207 ORTHO05D007868 7.6e-10 68.9 70 44.3
Mapoly0060s0108 Marchantia polymorpha HOM05D006207 ORTHO05D007868 3.8e-09 66.6 119 35.3
SalBow2G0248 Salvia bowleyana HOM05D007863 ORTHO05D009265 1.4e-08 64.7 106 34.9
VMungo0647G0753 Vigna mungo HOM05D006207 ORTHO05D007868 1.4e-08 64.7 125 37.6
SalBow8G1578 Salvia bowleyana HOM05D006207 ORTHO05D007868 2.5e-08 63.9 78 46.2
SEGI_11687 Sequoiadendron giganteum HOM05D003404 ORTHO05D000003 2.1e-07 60.8 95 41.1
SalBow1G6530 Salvia bowleyana HOM05D006207 ORTHO05D007868 3.0e-06 57.0 101 37.6


User provided reference genes

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