Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 5.4e-159 564.3 291 100.0
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 1.3e-131 473.4 279 84.2
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 4.2e-119 431.8 272 79.0
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 7.1e-119 431.0 272 79.0
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 8.2e-115 417.5 269 79.9
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 1.3e-112 410.2 272 76.1
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 2.9e-112 409.1 274 75.9
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 7.9e-110 401.0 274 76.3
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 7.9e-110 401.0 274 76.3
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 4.3e-108 395.2 275 75.3
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 2.2e-107 392.9 272 72.8
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 5.3e-106 388.3 274 73.7
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 1.2e-105 387.1 273 72.2
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 7.7e-105 384.4 280 71.1
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 1.0e-104 384.0 274 71.5
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 1.3e-104 383.6 274 70.4
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 2.2e-104 382.9 269 71.0
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 3.8e-104 382.1 274 71.9
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 6.5e-104 381.3 272 72.1
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 8.5e-104 380.9 210 86.7
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 8.5e-104 380.9 210 85.2
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 3.2e-103 379.0 271 72.7
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 3.2e-103 379.0 280 70.4
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 3.2e-103 379.0 269 71.7
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 4.2e-103 378.6 200 87.5
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 4.2e-103 378.6 260 73.8
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 5.5e-103 378.3 280 69.6
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 2.1e-102 376.3 210 84.8
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 3.6e-102 375.6 202 86.6
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 3.6e-102 375.6 268 70.9
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 3.6e-102 375.6 275 70.2
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 1.4e-101 373.6 206 84.5
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 1.4e-101 373.6 212 83.5
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 1.8e-101 373.2 274 70.4
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 2.3e-101 372.9 202 86.1
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 3.0e-101 372.5 202 85.6
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 3.9e-101 372.1 200 86.5
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 3.9e-101 372.1 268 69.8
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 6.7e-101 371.3 208 82.7
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 6.7e-101 371.3 203 85.2
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 6.7e-101 371.3 213 82.6
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 8.8e-101 370.9 270 68.5
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 1.5e-100 370.2 213 82.2
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 2.0e-100 369.8 212 83.0
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 5.7e-100 368.2 209 81.3
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 7.4e-100 367.9 193 88.6
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 1.3e-99 367.1 210 83.8
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 4.8e-99 365.2 290 67.2
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 6.3e-99 364.8 218 78.0
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 1.1e-98 364.0 197 86.3
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 4.1e-98 362.1 193 87.6
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 7.0e-98 361.3 197 84.8
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 9.1e-98 360.9 197 83.2
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 1.5e-97 360.1 201 82.6
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 3.5e-97 359.0 199 82.4
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 4.5e-97 358.6 199 82.4
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 5.9e-97 358.2 198 82.3
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 1.0e-96 357.5 202 81.7
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 1.0e-96 357.5 198 83.8
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 1.3e-96 357.1 197 83.2
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 1.7e-96 356.7 197 85.8
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 1.7e-96 356.7 274 71.2
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 3.8e-96 355.5 197 83.8
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 3.8e-96 355.5 197 85.8
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 3.8e-96 355.5 197 85.8
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 5.0e-96 355.1 274 67.5
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 8.5e-96 354.4 200 82.0
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 8.5e-96 354.4 200 82.0
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 2.5e-95 352.8 211 78.2
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 2.5e-95 352.8 197 85.3
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 1.2e-94 350.5 198 81.8
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 2.7e-94 349.4 264 68.6
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 2.6e-92 342.8 227 72.7
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 4.4e-92 342.0 197 81.7
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 1.1e-90 337.4 213 75.6
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 1.1e-90 337.4 275 65.8
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 1.8e-90 336.7 194 81.4
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 2.4e-90 336.3 194 80.4
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 4.1e-90 335.5 203 75.9
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 3.5e-89 332.4 192 78.6
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 1.0e-88 330.9 207 78.7
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 3.8e-88 328.9 193 77.2
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 3.8e-88 328.9 212 72.6
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 1.5e-87 327.0 271 63.8
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 2.7e-86 322.8 271 63.1
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 4.0e-85 318.9 242 66.1
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 3.3e-84 315.8 193 73.6
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 4.1e-82 308.9 167 84.4
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 5.9e-81 305.1 193 73.6
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 3.8e-80 302.4 237 66.7
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 4.2e-79 298.9 171 79.5
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 1.6e-78 297.0 353 49.0
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 3.6e-78 295.8 164 81.1
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 1.5e-76 290.4 186 71.5
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 7.5e-76 288.1 164 79.3
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 4.8e-75 285.4 222 68.0
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 2.4e-74 283.1 206 70.9
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 1.0e-72 277.7 218 66.1
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 1.1e-58 231.1 139 82.7
Migut.J01851 Erythranthe guttata HOM05D007056 ORTHO05D008278 2.7e-57 226.5 122 86.1
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 1.3e-56 224.2 198 62.1
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 6.2e-54 215.3 497 34.4
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 8.0e-54 214.9 227 55.1
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 5.2e-53 212.2 121 79.3
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 5.2e-53 212.2 177 66.7
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 7.5e-52 208.4 278 46.4
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 6.6e-48 195.3 178 62.9
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 4.9e-43 179.1 167 64.1
Nitab4.5_0001440g0050 Nicotiana tabacum HOM05D007056 ORTHO05D008278 2.7e-41 173.3 94 81.9
Hma1.2p1_0645F.1_g194860 Hydrangea macrophylla HOM05D007056 ORTHO05D008278 1.6e-33 147.5 73 89.0
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 1.0e-32 144.8 213 44.6
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 3.1e-29 133.3 76 76.3
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 1.7e-27 127.5 72 76.4
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 4.6e-17 92.8 96 52.1
SHI31775 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-09 67.8 51 72.5
Rhsim04G0095100 Rhododendron simsii HOM05D003299 ORTHO05D003811 1.3e-06 58.2 37 75.7


User provided reference genes

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