Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib093G0735 Durio zibethinus HOM05D007539 ORTHO05D009315 2.4e-117 425.6 234 100.0
Thecc.05G075600 Theobroma cacao HOM05D007539 ORTHO05D009315 4.6e-100 368.2 237 88.6
COL.COLO4_22255 Corchorus olitorius HOM05D007539 ORTHO05D009315 3.3e-98 362.1 235 84.7
Gorai.009G410900 Gossypium raimondii HOM05D007539 ORTHO05D009315 8.4e-94 347.4 238 85.7
Gohir.A04G068300 Gossypium hirsutum HOM05D007539 ORTHO05D009315 4.1e-93 345.1 238 85.3
Gohir.D04G106800 Gossypium hirsutum HOM05D007539 ORTHO05D009315 9.2e-93 344.0 236 86.0
Manes.08G015800 Manihot esculenta HOM05D007539 ORTHO05D009315 1.8e-88 329.7 234 72.2
Cpa.g.sc5.125 Carica papaya HOM05D007539 ORTHO05D009315 1.3e-86 323.6 239 75.3
Ciclev10009520m.g Citrus clementina HOM05D007539 ORTHO05D009315 7.8e-84 314.3 211 75.4
Lj5g0010413 Lotus japonicus HOM05D007539 ORTHO05D009315 7.8e-84 314.3 170 85.3
VMungo0720G2140 Vigna mungo HOM05D007539 ORTHO05D009315 8.7e-83 310.8 169 85.2
Dinv37358 Davidia involucrata HOM05D007539 ORTHO05D009315 1.1e-82 310.5 237 68.4
Ca_11568_v3 Cicer arietinum L. HOM05D007539 ORTHO05D009315 1.5e-82 310.1 170 84.1
Cfa016483 Carpinus fangiana HOM05D007539 ORTHO05D009315 3.3e-82 308.9 171 84.2
Glyma.10G063500 Glycine max HOM05D007539 ORTHO05D009315 5.6e-82 308.1 169 85.2
Psat6g077160 Pisum sativum HOM05D007539 ORTHO05D009315 7.3e-82 307.8 171 83.6
Prupe.7G122900 Prunus persica HOM05D007539 ORTHO05D009315 9.6e-82 307.4 235 75.3
arahy.Tifrunner.gnm1.ann1.6XWD2H Arachis hypogaea HOM05D007539 ORTHO05D009315 1.6e-81 306.6 169 85.8
arahy.Tifrunner.gnm1.ann1.M3KAW1 Arachis hypogaea HOM05D007539 ORTHO05D009315 1.6e-81 306.6 169 85.8
Phvul.007G226000 Phaseolus vulgaris HOM05D007539 ORTHO05D009315 2.1e-81 306.2 169 84.0
PGR142G1614 Punica granatum HOM05D007539 ORTHO05D009315 6.2e-81 304.7 233 74.2
Potri.016G096900 Populus trichocarpa HOM05D007539 ORTHO05D009315 4.0e-80 302.0 173 83.2
QL07p041368 Quercus lobata HOM05D007539 ORTHO05D009315 1.2e-79 300.4 233 73.8
Lj2A124T70 Lonicera japonica HOM05D007539 ORTHO05D009315 2.0e-79 299.7 236 66.1
Nn2g13907 Nelumbo nucifera HOM05D007539 ORTHO05D009315 4.5e-79 298.5 169 82.8
TPR.G9909 Trifolium pratense HOM05D007539 ORTHO05D009315 4.5e-79 298.5 171 80.1
TWI74G0011 Tripterygium wilfordii HOM05D007539 ORTHO05D009315 4.5e-79 298.5 237 66.7
Eucgr.K02419 Eucalyptus grandis HOM05D007539 ORTHO05D009315 2.9e-78 295.8 170 81.2
Eucgr.K02422 Eucalyptus grandis HOM05D007539 ORTHO05D009315 2.9e-78 295.8 170 81.2
Nitab4.5_0009839g0010 Nicotiana tabacum HOM05D007539 ORTHO05D009315 1.4e-77 293.5 233 67.8
Cc06_g04790 Coffea canephora HOM05D007539 ORTHO05D009315 2.4e-77 292.7 242 64.0
Aqoxy4G02594 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 4.2e-77 292.0 171 80.7
BcaB01g05802 Brassica carinata HOM05D007539 ORTHO05D009315 1.6e-76 290.0 235 66.8
Medtr1g062250 Medicago truncatula HOM05D007539 ORTHO05D009315 1.6e-76 290.0 171 80.1
RcHm_v2.0_Chr3g0471301 Rosa chinensis HOM05D007539 ORTHO05D009315 1.6e-76 290.0 233 65.2
Sc20g0005850 Simmondsia chinensis HOM05D007539 ORTHO05D009315 1.6e-76 290.0 170 80.0
GSVIVG01033714001 Vitis vinifera HOM05D007539 ORTHO05D009315 2.1e-76 289.7 170 78.8
MELO3C009408.2 Cucumis melo HOM05D007539 ORTHO05D009315 3.5e-76 288.9 171 80.1
Aqoxy2G01556 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 4.6e-76 288.5 169 81.1
Sopen10g035220 Solanum pennellii HOM05D007539 ORTHO05D009315 4.6e-76 288.5 233 66.5
Peaxi162Scf00146g00014 Petunia axillaris HOM05D007539 ORTHO05D009315 6.0e-76 288.1 169 79.9
PGSC0003DMG400008599 Solanum tuberosum HOM05D007539 ORTHO05D009315 6.0e-76 288.1 233 66.1
SalBow5G4705 Salvia bowleyana HOM05D007539 ORTHO05D009315 7.9e-76 287.7 170 77.6
CARHR209760 Cardamine hirsuta HOM05D007539 ORTHO05D009315 1.8e-75 286.6 242 67.8
Solyc10g085820.2 Solanum lycopersicum HOM05D007539 ORTHO05D009315 3.0e-75 285.8 233 66.1
FAN05G2086 Fragaria x ananassa HOM05D007539 ORTHO05D009315 3.9e-75 285.4 236 65.3
Sed0004549 Sechium edule HOM05D007539 ORTHO05D009315 6.7e-75 284.6 171 78.9
HanXRQChr08g0218701 Helianthus annuus HOM05D007539 ORTHO05D009315 8.7e-75 284.3 168 79.8
MD12G1102800 Malus domestica HOM05D007539 ORTHO05D009315 8.7e-75 284.3 242 64.5
MBI11_g41953_MAGBIO Magnolia biondii HOM05D007539 ORTHO05D009315 1.1e-74 283.9 172 77.3
CAN.G729.5 Capsicum annuum HOM05D007539 ORTHO05D009315 3.3e-74 282.3 167 79.6
Ah.08g211220 Amaranthus hybridus HOM05D007539 ORTHO05D009315 1.6e-73 280.0 165 78.8
Thhalv10014552m.g Eutrema salsugineum HOM05D007539 ORTHO05D009315 2.1e-73 279.6 239 68.2
FAN05G5748 Fragaria x ananassa HOM05D007539 ORTHO05D009315 3.6e-73 278.9 236 68.2
CANSAT80G1421 Cannabis sativa HOM05D007539 ORTHO05D009315 4.8e-73 278.5 178 77.5
Migut.L01732 Erythranthe guttata HOM05D007539 ORTHO05D009315 4.8e-73 278.5 233 61.8
FvH4_6g17220 Fragaria vesca HOM05D007539 ORTHO05D009315 6.2e-73 278.1 236 64.0
EL10Ac7g16719 Beta vulgaris HOM05D007539 ORTHO05D009315 4.0e-72 275.4 166 76.5
FAN14G0473 Fragaria x ananassa HOM05D007539 ORTHO05D009315 5.3e-72 275.0 236 64.4
Sabra16G0100100 Salix brachista HOM05D007539 ORTHO05D009315 5.3e-72 275.0 205 67.8
HPP92_014788 Vanilla planifolia HOM05D007539 ORTHO05D009315 5.3e-72 275.0 168 75.6
Actinidia39861 Actinidia chinensis HOM05D007539 ORTHO05D009315 6.9e-72 274.6 233 62.7
FAN02G2576 Fragaria x ananassa HOM05D007539 ORTHO05D009315 2.6e-71 272.7 236 64.4
Oeu045245.1 Olea europaea HOM05D007539 ORTHO05D009315 2.6e-71 272.7 170 75.3
MSTRG.10338 Avicennia marina HOM05D007539 ORTHO05D009315 4.5e-71 271.9 230 60.4
A03p01240 Brassica napus HOM05D007539 ORTHO05D009315 4.5e-71 271.9 185 72.4
ECA238G4618 Erigeron canadensis HOM05D007539 ORTHO05D009315 1.1e-69 267.3 166 75.9
AUR62042699 Chenopodium quinoa HOM05D007539 ORTHO05D009315 3.2e-69 265.8 166 74.1
CsaV3_3G036460 Cucumis sativus L. HOM05D007539 ORTHO05D009315 4.2e-69 265.4 171 76.0
Glyma.13G148000 Glycine max HOM05D007539 ORTHO05D009315 5.5e-69 265.0 142 86.6
CiPaw.09G005200 Carya illinoinensis HOM05D007539 ORTHO05D009315 9.3e-69 264.2 211 74.9
Os08g0560600 Oryza sativa ssp. japonica HOM05D007539 ORTHO05D009315 1.2e-68 263.8 165 73.9
Zm00001eb175880 Zea mays HOM05D007539 ORTHO05D009315 2.7e-68 262.7 164 73.2
CDE02G3922 Ceratophyllum demersum HOM05D007539 ORTHO05D009315 1.3e-67 260.4 168 72.6
PSO339G1895 Papaver somniferum HOM05D007539 ORTHO05D009315 1.8e-67 260.0 231 59.7
Lalb_Chr02g0155351 Lupinus albus HOM05D007539 ORTHO05D009315 3.9e-67 258.8 147 80.3
Rhsim03G0085100 Rhododendron simsii HOM05D007539 ORTHO05D009315 5.1e-67 258.5 286 53.5
unitig_8.g4721 Utricularia gibba HOM05D007539 ORTHO05D009315 6.7e-67 258.1 172 70.3
SGA_v2.0_scaffold224G42914 Striga asiatica HOM05D007539 ORTHO05D009315 1.1e-66 257.3 230 59.1
TAR633G2614 Trochodendron aralioides HOM05D006793 ORTHO05D009315 2.8e-65 252.7 206 66.5
ATR0950G005 Amborella trichopoda HOM05D007539 ORTHO05D009315 2.4e-64 249.6 221 58.8
ClCG10G019640 Citrullus lanatus HOM05D007539 ORTHO05D009315 4.0e-64 248.8 190 71.1
BolC3t12712H Brassica oleracea HOM05D007539 ORTHO05D009315 5.8e-63 245.0 307 49.8
Nitab4.5_0000725g0080 Nicotiana tabacum HOM05D007539 ORTHO05D009315 1.7e-62 243.4 268 53.7
Ah.12g063350 Amaranthus hybridus HOM05D007539 ORTHO05D009315 3.5e-60 235.7 139 77.0
C03p01600 Brassica napus HOM05D007539 ORTHO05D009315 3.5e-60 235.7 205 63.9
vmacro07349 Vaccinium macrocarpon HOM05D007539 ORTHO05D009315 1.9e-58 229.9 139 77.0
Aa31LG1G21630 Aethionema arabicum HOM05D007539 ORTHO05D009315 2.5e-58 229.6 148 73.6
BcaB01g05814 Brassica carinata HOM05D007539 ORTHO05D009315 2.5e-58 229.6 141 78.0
Lsat_1_v5_gn_2_18420 Lactuca sativa HOM05D007539 ORTHO05D009315 8.7e-51 204.5 122 77.0
Carub.0006s0239 Capsella rubella HOM05D007539 ORTHO05D009315 3.7e-49 199.1 123 75.6
AL6G13050 Arabidopsis lyrata HOM05D007539 ORTHO05D009315 8.2e-49 198.0 123 74.0
AUR62040192 Chenopodium quinoa HOM05D007539 ORTHO05D009315 3.4e-47 192.6 122 73.0
BraA03t09504Z Brassica rapa HOM05D007539 ORTHO05D009315 6.5e-46 188.3 218 48.6
Mapoly0014s0214 Marchantia polymorpha HOM05D007539 ORTHO05D009315 2.3e-43 179.9 183 49.7
AagrBONN_evm.TU.Sc2ySwM_117.3355 Anthoceros agrestis HOM05D007539 ORTHO05D009315 5.7e-42 175.3 164 48.8
FAN09G1910 Fragaria x ananassa HOM05D007539 ORTHO05D009315 7.0e-32 141.7 77 85.7
QL07p041388 Quercus lobata HOM05D007539 ORTHO05D009315 2.2e-30 136.7 74 79.7
CBR_g37238 Chara braunii HOM05D007539 ORTHO05D009315 1.1e-21 107.8 237 29.5
FAN13G0623 Fragaria x ananassa HOM05D002804 ORTHO05D003755 2.5e-13 80.1 120 48.3
THA.LOC104826924 Tarenaya hassleriana HOM05D002804 ORTHO05D003755 3.7e-09 66.2 100 52.0
CSS0032451 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 3.1e-08 63.2 113 41.6
CSS0027054 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 4.1e-08 62.8 95 47.4
CSS0044668 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 1.3e-06 57.8 96 44.8
AL6G13060 Arabidopsis lyrata HOM05D002804 ORTHO05D003755 6.6e-06 55.5 106 40.6


User provided reference genes

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