Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 6.5e-188 660.6 339 100.0
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 7.2e-163 577.4 359 84.1
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 6.7e-161 570.9 357 82.9
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 1.1e-160 570.1 358 82.7
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 1.7e-159 566.2 358 82.1
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 3.7e-159 565.1 358 81.8
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 5.7e-144 514.6 360 69.4
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 1.8e-142 509.6 355 74.1
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 3.5e-141 505.4 353 72.5
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 3.5e-141 505.4 359 68.8
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 4.5e-141 505.0 353 70.3
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 1.7e-140 503.1 353 69.1
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 5.0e-140 501.5 353 68.6
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 4.7e-138 495.0 355 71.3
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 8.0e-138 494.2 355 69.6
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 3.0e-137 492.3 353 69.4
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 8.9e-137 490.7 350 67.4
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 2.8e-135 485.7 320 72.2
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 3.7e-135 485.3 350 66.9
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 3.7e-135 485.3 360 67.2
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 7.0e-134 481.1 353 69.1
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 1.6e-133 479.9 357 66.7
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 4.5e-133 478.4 351 66.1
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 1.7e-132 476.5 353 69.7
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 2.9e-132 475.7 353 68.3
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 2.9e-132 475.7 353 65.7
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 5.6e-131 471.5 353 66.6
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 1.4e-129 466.8 353 64.0
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 2.3e-129 466.1 352 64.2
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 4.0e-129 465.3 357 60.2
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 8.9e-129 464.2 351 69.8
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 2.0e-128 463.0 355 63.1
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 2.0e-128 463.0 353 68.0
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 9.8e-128 460.7 336 72.3
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 9.8e-128 460.7 336 72.3
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 3.7e-127 458.8 336 72.0
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 4.9e-127 458.4 452 54.6
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 6.4e-127 458.0 355 62.8
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 8.3e-127 457.6 350 63.1
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 1.1e-126 457.2 355 63.1
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 4.1e-126 455.3 351 59.0
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 5.4e-126 454.9 350 63.4
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 9.2e-126 454.1 383 59.0
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 9.2e-126 454.1 350 63.7
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 7.8e-125 451.1 351 64.4
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 5.0e-124 448.4 415 55.7
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 5.0e-124 448.4 356 63.2
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 6.6e-124 448.0 415 55.7
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 3.3e-123 445.7 349 58.5
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 4.3e-123 445.3 500 49.0
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 2.3e-121 439.5 353 61.2
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 1.2e-120 437.2 353 61.2
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 1.5e-120 436.8 350 60.6
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 3.3e-115 419.1 352 61.1
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 7.3e-115 417.9 351 57.5
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 1.6e-114 416.8 364 58.5
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 4.7e-114 415.2 327 61.5
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 2.2e-111 406.4 351 58.1
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 2.7e-109 399.4 358 57.8
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 1.2e-106 390.6 353 56.7
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 1.8e-105 386.7 285 64.2
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 1.8e-105 386.7 359 54.0
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 1.9e-99 366.7 455 45.9
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 7.6e-96 354.8 353 53.0
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 1.1e-86 324.3 294 56.1
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 2.6e-80 303.1 179 77.1
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 1.7e-71 273.9 214 62.1
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 2.2e-71 273.5 234 57.7
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 2.2e-71 273.5 341 47.5
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 4.2e-70 269.2 193 65.8
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 6.3e-66 255.4 358 37.7
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 5.3e-65 252.3 357 38.9
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 2.2e-58 230.3 140 72.9
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 1.8e-57 227.3 246 47.6
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 1.3e-55 221.1 160 76.2
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 5.7e-51 205.7 162 63.6
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 1.4e-46 191.0 235 41.7
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 1.6e-45 187.6 147 64.6
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 8.8e-44 181.8 105 78.1
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 2.1e-37 160.6 326 34.0
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 1.2e-32 144.8 107 68.2
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.4e-28 131.3 104 63.5
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 1.4e-28 131.3 102 65.7
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 5.2e-28 129.4 368 27.7
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.7e-26 124.4 115 57.4
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 8.3e-26 122.1 333 27.6
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.0e-24 117.5 70 81.4
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.7e-24 117.1 70 80.0
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 5.9e-24 115.9 105 51.4
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.0e-23 115.2 70 78.6
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.9e-23 113.6 70 78.6
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 7.2e-22 109.0 104 46.2
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 1.2e-21 108.2 55 85.5
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 3.7e-18 96.7 72 63.9
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 6.3e-18 95.9 91 58.2
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 6.6e-15 85.9 291 25.4
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 2.6e-11 73.9 58 55.2
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 9.8e-11 72.0 166 32.5
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 9.8e-11 72.0 94 37.2
arahy.Tifrunner.gnm1.ann1.B7BSQF Arachis hypogaea HOM05D000002 ORTHO05D000047 1.9e-09 67.8 180 32.8
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 4.1e-09 66.6 70 48.6
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 4.1e-09 66.6 70 48.6
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.6e-08 64.7 71 47.9
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 2.3e-07 60.8 70 45.7


User provided reference genes

Program Settings