Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib093G0416 Durio zibethinus HOM05D007355 ORTHO05D009343 1.2e-42 176.0 86 100.0
Thecc.08G043500 Theobroma cacao HOM05D007355 ORTHO05D009343 2.6e-37 158.3 86 89.5
CiPaw.08G065900 Carya illinoinensis HOM05D007355 ORTHO05D009343 5.2e-33 144.1 91 80.2
Gorai.009G194900 Gossypium raimondii HOM05D007355 ORTHO05D009343 5.2e-33 144.1 87 83.9
Gohir.D05G189650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 4.4e-32 141.0 87 82.8
Gorai.009G270200 Gossypium raimondii HOM05D007355 ORTHO05D009343 5.7e-32 140.6 88 83.0
Gohir.A05G257150 Gossypium hirsutum HOM05D007355 ORTHO05D009343 9.7e-32 139.8 88 83.0
Ciclev10003277m.g Citrus clementina HOM05D007355 ORTHO05D009343 2.8e-31 138.3 83 84.3
Gohir.A05G186732 Gossypium hirsutum HOM05D007355 ORTHO05D009343 3.7e-31 137.9 87 81.6
Gohir.D05G258650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 4.8e-31 137.5 88 81.8
Manes.05G148200 Manihot esculenta HOM05D007355 ORTHO05D009343 4.1e-30 134.4 89 78.7
Haze_22626 Corylus avellana HOM05D007355 ORTHO05D009343 7.0e-30 133.7 87 79.3
Potri.005G238400 Populus trichocarpa HOM05D007355 ORTHO05D009343 2.0e-29 132.1 86 79.1
Manes.18G014200 Manihot esculenta HOM05D007355 ORTHO05D009343 5.9e-29 130.6 90 76.7
Sabra05G0184200 Salix brachista HOM05D007355 ORTHO05D009343 7.7e-29 130.2 86 76.7
COL.COLO4_26156 Corchorus olitorius HOM05D007355 ORTHO05D009343 1.7e-28 129.0 92 72.8
QL02p011487 Quercus lobata HOM05D007355 ORTHO05D009343 1.7e-28 129.0 88 76.1
Gohir.A06G004700 Gossypium hirsutum HOM05D007355 ORTHO05D009343 3.2e-27 124.8 87 74.7
TAR625G0791 Trochodendron aralioides HOM05D007355 ORTHO05D009343 9.4e-27 123.2 86 74.4
Gohir.D06G000500 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.2e-26 122.9 87 73.6
Gorai.010G004900 Gossypium raimondii HOM05D007355 ORTHO05D009343 1.2e-26 122.9 87 73.6
Cfa013942 Carpinus fangiana HOM05D007355 ORTHO05D009343 1.6e-26 122.5 89 75.3
Lalb_Chr14g0369841 Lupinus albus HOM05D007355 ORTHO05D009343 2.1e-26 122.1 85 70.6
VMungo1309G0669 Vigna mungo HOM05D007355 ORTHO05D009343 1.4e-25 119.4 84 72.6
arahy.Tifrunner.gnm1.ann1.Y2NNQI Arachis hypogaea HOM05D007355 ORTHO05D009343 6.7e-25 117.1 84 70.2
arahy.Tifrunner.gnm1.ann1.PADY8Y Arachis hypogaea HOM05D007355 ORTHO05D009343 8.8e-25 116.7 85 69.4
Ca_13424_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 1.5e-24 115.9 85 68.2
Ca_13425_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 1.5e-24 115.9 85 68.2
Glyma.06G024800 Glycine max HOM05D007355 ORTHO05D009343 2.6e-24 115.2 84 69.0
MD15G1013100 Malus domestica HOM05D007355 ORTHO05D009343 2.6e-24 115.2 94 63.8
PGR083G2600 Punica granatum HOM05D007355 ORTHO05D009343 3.3e-24 114.8 86 66.3
Phvul.009G016500 Phaseolus vulgaris HOM05D007355 ORTHO05D009343 9.7e-24 113.2 84 69.0
Glyma.04G024700 Glycine max HOM05D007355 ORTHO05D009343 1.3e-23 112.8 84 67.9
Hma1.2p1_0638F.1_g193820 Hydrangea macrophylla HOM05D007355 ORTHO05D009343 1.7e-23 112.5 90 64.4
CiPaw.07G150900 Carya illinoinensis HOM05D007355 ORTHO05D009343 8.3e-23 110.2 73 78.1
FAN15G2202 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.1e-22 109.8 81 67.9
FAN20G0162 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.1e-22 109.8 78 69.2
FAN27G0012 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.1e-22 109.8 81 67.9
CSS0013130 Camellia sinensis var. sinensis HOM05D007355 ORTHO05D009343 1.4e-22 109.4 90 64.4
Lj5g0016063 Lotus japonicus HOM05D007355 ORTHO05D009343 1.4e-22 109.4 88 62.5
PGSC0003DMG400009860 Solanum tuberosum HOM05D007355 ORTHO05D009343 1.4e-22 109.4 98 60.2
Solyc04g081380.1 Solanum lycopersicum HOM05D007355 ORTHO05D009343 2.4e-22 108.6 98 62.2
ClCG05G018320 Citrullus lanatus HOM05D007355 ORTHO05D009343 3.1e-22 108.2 87 64.4
Lalb_Chr22g0354351 Lupinus albus HOM05D007355 ORTHO05D009343 7.0e-22 107.1 87 60.9
Atru.chr13.303 Acer truncatum HOM05D007355 ORTHO05D009343 9.1e-22 106.7 76 76.3
Cpa.g.sc26.34 Carica papaya HOM05D007355 ORTHO05D009343 1.6e-21 105.9 93 62.4
Sed0019478 Sechium edule HOM05D007355 ORTHO05D009343 1.6e-21 105.9 86 64.0
Dinv39511 Davidia involucrata HOM05D007355 ORTHO05D009343 5.9e-21 104.0 84 65.5
Nn1g05885 Nelumbo nucifera HOM05D007355 ORTHO05D009343 1.0e-20 103.2 88 67.0
MELO3C011006.2 Cucumis melo HOM05D007355 ORTHO05D009343 1.3e-20 102.8 88 60.2
CsaV3_2G029470 Cucumis sativus L. HOM05D007355 ORTHO05D009343 2.2e-20 102.1 83 59.0
Prupe.1G366200 Prunus persica HOM05D007355 ORTHO05D009343 2.2e-20 102.1 88 63.6
Aqoxy5G01778 Aquilegia oxysepala HOM05D007355 ORTHO05D009343 2.9e-20 101.7 88 63.6
ClCG08G014360 Citrullus lanatus HOM05D007355 ORTHO05D009343 2.9e-20 101.7 83 59.0
Medtr1g025150 Medicago truncatula HOM05D007355 ORTHO05D009343 2.9e-20 101.7 81 63.0
Actinidia37930 Actinidia chinensis HOM05D007355 ORTHO05D009343 6.5e-20 100.5 78 69.2
Sed0024841 Sechium edule HOM05D007355 ORTHO05D009343 1.1e-19 99.8 74 63.5
SalBow7G4291 Salvia bowleyana HOM05D007355 ORTHO05D009343 5.5e-19 97.4 85 62.4
TPR.G26402 Trifolium pratense HOM05D007355 ORTHO05D009343 5.5e-19 97.4 81 59.3
Lj1g0016145 Lotus japonicus HOM05D007355 ORTHO05D009343 1.2e-18 96.3 87 66.7
DCAR_017465 Daucus carota HOM05D007355 ORTHO05D009343 1.6e-18 95.9 95 56.8
CAN.G311.23 Capsicum annuum HOM05D007355 ORTHO05D009343 3.6e-18 94.7 73 67.1
CsaV3_3G045820 Cucumis sativus L. HOM05D007355 ORTHO05D009343 3.6e-18 94.7 74 66.2
Peaxi162Scf00400g00042 Petunia axillaris HOM05D007355 ORTHO05D009343 4.7e-18 94.4 97 57.7
Sc15g0005040 Simmondsia chinensis HOM05D007355 ORTHO05D009343 6.1e-18 94.0 90 57.8
Migut.C00824 Erythranthe guttata HOM05D007355 ORTHO05D009343 5.2e-17 90.9 100 56.0
MBI05_g15356_MAGBIO Magnolia biondii HOM05D007355 ORTHO05D009343 5.2e-17 90.9 78 62.8
THA.LOC104814032 Tarenaya hassleriana HOM05D007355 ORTHO05D009343 5.2e-17 90.9 93 57.0
BcaC07g39013 Brassica carinata HOM05D007355 ORTHO05D009343 3.4e-16 88.2 89 51.7
A08p29560 Brassica napus HOM05D007355 ORTHO05D009343 3.4e-16 88.2 89 51.7
C08p19840 Brassica napus HOM05D007355 ORTHO05D009343 3.4e-16 88.2 89 51.7
BolC8t49623H Brassica oleracea HOM05D007355 ORTHO05D009343 3.4e-16 88.2 89 51.7
BraA08t34894Z Brassica rapa HOM05D007355 ORTHO05D009343 3.4e-16 88.2 89 51.7
Nn5g30158 Nelumbo nucifera HOM05D007355 ORTHO05D009343 3.4e-16 88.2 92 59.8
BcaC08g47049 Brassica carinata HOM05D007355 ORTHO05D009343 7.5e-16 87.0 73 67.1
Aa31LG4G5940 Aethionema arabicum HOM05D007355 ORTHO05D009343 9.8e-16 86.7 71 62.0
AL1G32690 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 1.3e-15 86.3 75 58.7
DCAR_013865 Daucus carota HOM05D007355 ORTHO05D009343 1.3e-15 86.3 93 53.8
Lsat_1_v5_gn_2_9841 Lactuca sativa HOM05D007355 ORTHO05D009343 1.7e-15 85.9 95 52.6
Sp1g17750 Schrenkiella parvula HOM05D007355 ORTHO05D009343 1.7e-15 85.9 92 53.3
Eucgr.F01645 Eucalyptus grandis HOM05D007355 ORTHO05D009343 2.8e-15 85.1 73 61.6
Thhalv10009918m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 3.7e-15 84.7 89 52.8
C06p49660 Brassica napus HOM05D007355 ORTHO05D009343 4.8e-15 84.3 73 65.8
BolC6t40005H Brassica oleracea HOM05D007355 ORTHO05D009343 4.8e-15 84.3 73 65.8
A07p41240 Brassica napus HOM05D007355 ORTHO05D009343 6.3e-15 84.0 73 65.8
BraA07t31659Z Brassica rapa HOM05D007355 ORTHO05D009343 6.3e-15 84.0 73 65.8
BcaB02g07039 Brassica carinata HOM05D007355 ORTHO05D009343 2.4e-14 82.0 86 55.8
Carub.0001s1949 Capsella rubella HOM05D007355 ORTHO05D009343 3.1e-14 81.6 73 58.9
Thhalv10019842m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 3.1e-14 81.6 74 66.2
Rhsim07G0246800 Rhododendron simsii HOM05D007355 ORTHO05D009343 5.4e-14 80.9 78 59.0
Ah.11g039070 Amaranthus hybridus HOM05D007355 ORTHO05D009343 7.0e-14 80.5 79 59.5
CARHR020450 Cardamine hirsuta HOM05D007355 ORTHO05D009343 9.1e-14 80.1 86 52.3
BcaB03g14421 Brassica carinata HOM05D007355 ORTHO05D009343 1.6e-13 79.3 78 51.3
Carub.0002s2256 Capsella rubella HOM05D007355 ORTHO05D009343 2.7e-13 78.6 72 59.7
AT1G75717 Arabidopsis thaliana HOM05D007355 ORTHO05D009343 3.5e-13 78.2 78 55.1
CARHR069120 Cardamine hirsuta HOM05D007355 ORTHO05D009343 4.5e-13 77.8 76 55.3
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 5.9e-13 77.4 84 54.8
AL2G35700 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 7.7e-13 77.0 79 57.0
BcaB03g14350 Brassica carinata HOM05D007355 ORTHO05D009343 7.7e-13 77.0 71 50.7
BcaC08g45561 Brassica carinata HOM05D007355 ORTHO05D009343 2.9e-12 75.1 84 52.4
C06p32480 Brassica napus HOM05D007355 ORTHO05D009343 6.6e-12 73.9 84 52.4
BolC6t38371H Brassica oleracea HOM05D007355 ORTHO05D009343 6.6e-12 73.9 84 52.4
DCAR_009926 Daucus carota HOM05D007355 ORTHO05D009343 9.5e-11 70.1 84 52.4
BcaB03g12886 Brassica carinata HOM05D007355 ORTHO05D009343 2.1e-10 68.9 92 44.6


User provided reference genes

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