Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib093G0410 Durio zibethinus HOM05D000475 ORTHO05D014148 2.0e-42 175.3 84 100.0
Lj2g0010150 Lotus japonicus HOM05D000475 ORTHO05D000343 4.0e-22 107.8 83 57.8
Rhsim03G0148100 Rhododendron simsii HOM05D000475 ORTHO05D014148 1.5e-21 105.9 80 58.8
CANSAT54G2746 Cannabis sativa HOM05D000475 ORTHO05D014148 2.0e-21 105.5 74 59.5
Peaxi162Scf00264g00858 Petunia axillaris HOM05D000001 ORTHO05D000003 3.4e-21 104.8 75 57.3
Sopen10g034800 Solanum pennellii HOM05D000475 ORTHO05D014148 6.4e-20 100.5 80 53.8
Solyc10g076340.3 Solanum lycopersicum HOM05D000475 ORTHO05D000343 1.4e-19 99.4 82 51.2
HPP92_019732 Vanilla planifolia HOM05D000475 ORTHO05D014148 1.6e-18 95.9 80 52.5
AUR62030756 Chenopodium quinoa HOM05D000475 ORTHO05D000343 3.0e-17 91.7 73 56.2
MELO3C009131.2 Cucumis melo HOM05D000475 ORTHO05D000343 3.9e-17 91.3 73 56.2
Sopen10g027980 Solanum pennellii HOM05D001655 ORTHO05D000343 1.1e-16 89.7 73 50.7
AUR62041506 Chenopodium quinoa HOM05D003581 ORTHO05D014148 7.3e-16 87.0 71 54.9
Os07g0540366 Oryza sativa ssp. japonica HOM05D000475 ORTHO05D014148 7.3e-16 87.0 81 45.7
PSO675G0135 Papaver somniferum HOM05D000475 ORTHO05D000343 3.1e-14 81.6 66 53.0
Duzib128G1179 Durio zibethinus HOM05D000475 ORTHO05D000343 4.0e-14 81.3 39 92.3
PSO541G4842 Papaver somniferum HOM05D000475 ORTHO05D000343 6.8e-14 80.5 66 50.0
Thecc.05G006500 Theobroma cacao HOM05D000475 ORTHO05D000343 1.5e-13 79.3 42 83.3
COL.COLO4_14448 Corchorus olitorius HOM05D000475 ORTHO05D000343 9.9e-13 76.6 42 78.6
PSO017G1695 Papaver somniferum HOM05D000475 ORTHO05D000343 1.7e-12 75.9 66 48.5
PSO478G1812 Papaver somniferum HOM05D000475 ORTHO05D000343 1.7e-12 75.9 67 46.3
Gohir.A09G168100 Gossypium hirsutum HOM05D000475 ORTHO05D000343 3.8e-12 74.7 40 80.0
Gorai.006G185700 Gossypium raimondii HOM05D000475 ORTHO05D000343 5.4e-11 70.9 40 72.5
Gohir.D09G164100 Gossypium hirsutum HOM05D000475 ORTHO05D000343 9.2e-11 70.1 40 75.0
Hund13524 Selenicereus undatus HOM05D000475 ORTHO05D014148 1.6e-10 69.3 65 46.2
Solyc10g076330.3 Solanum lycopersicum HOM05D000475 ORTHO05D000343 2.7e-10 68.6 96 38.5
AUR62036403 Chenopodium quinoa HOM05D000475 ORTHO05D000343 6.0e-10 67.4 53 54.7
Sopen10g027970 Solanum pennellii HOM05D000475 ORTHO05D000343 7.8e-10 67.0 52 53.8
DCAR_018667 Daucus carota HOM05D000475 ORTHO05D000343 1.0e-09 66.6 97 33.0
PSO210G7041 Papaver somniferum HOM05D000475 ORTHO05D014148 6.6e-09 63.9 63 44.4
CDE07G1739 Ceratophyllum demersum HOM05D000475 ORTHO05D000343 8.7e-09 63.5 70 42.9
Dinv12172 Davidia involucrata HOM05D000475 ORTHO05D014148 1.9e-08 62.4 38 63.2
Hma1.2p1_0501F.1_g167350 Hydrangea macrophylla HOM05D000475 ORTHO05D000343 2.5e-08 62.0 39 64.1
Dinv21798 Davidia involucrata HOM05D000475 ORTHO05D000343 7.3e-08 60.5 38 63.2
Peaxi162Scf00264g00857 Petunia axillaris HOM05D000475 ORTHO05D014148 7.3e-08 60.5 82 35.4
TAR633G1711 Trochodendron aralioides HOM05D000475 ORTHO05D000343 9.6e-08 60.1 38 63.2
Peaxi162Scf00009g01231 Petunia axillaris HOM05D000475 ORTHO05D000343 2.1e-07 58.9 40 52.5
Manes.09G112000 Manihot esculenta HOM05D000475 ORTHO05D000343 4.7e-07 57.8 38 63.2
Potri.008G074200 Populus trichocarpa HOM05D000475 ORTHO05D000343 4.7e-07 57.8 32 75.0
SGA_v2.0_scaffold240G44069 Striga asiatica HOM05D000475 ORTHO05D000343 4.7e-07 57.8 40 57.5
GSVIVG01032736001 Vitis vinifera HOM05D000475 ORTHO05D000343 4.7e-07 57.8 38 63.2
Nitab4.5_0000355g0200 Nicotiana tabacum HOM05D000475 ORTHO05D000343 8.1e-07 57.0 40 47.5
Nitab4.5_0001226g0100 Nicotiana tabacum HOM05D000475 ORTHO05D000343 1.1e-06 56.6 38 52.6
Solyc09g015120.4 Solanum lycopersicum HOM05D000475 ORTHO05D000343 1.1e-06 56.6 40 52.5
Sopen09g008410 Solanum pennellii HOM05D000475 ORTHO05D000343 1.1e-06 56.6 38 55.3
PGSC0003DMG400011621 Solanum tuberosum HOM05D000475 ORTHO05D000343 1.1e-06 56.6 40 52.5
CAN.G629.5 Capsicum annuum HOM05D000475 ORTHO05D000343 1.8e-06 55.8 40 47.5
QL07p033892 Quercus lobata HOM05D000475 ORTHO05D000343 1.8e-06 55.8 40 52.5
EL10Ac2g04912 Beta vulgaris HOM05D000475 ORTHO05D000343 2.4e-06 55.5 37 54.1
AUR62022960 Chenopodium quinoa HOM05D000475 ORTHO05D000343 2.4e-06 55.5 37 56.8
Haze_21089 Corylus avellana HOM05D000475 ORTHO05D000343 2.4e-06 55.5 39 46.2
THA.LOC104816176 Tarenaya hassleriana HOM05D000475 ORTHO05D000343 2.4e-06 55.5 36 61.1
AUR62012320 Chenopodium quinoa HOM05D000475 ORTHO05D000343 3.1e-06 55.1 37 56.8
Cc02_g05890 Coffea canephora HOM05D000475 ORTHO05D000343 3.1e-06 55.1 38 60.5
Haze_17294 Corylus avellana HOM05D000475 ORTHO05D000343 3.1e-06 55.1 38 57.9
Dinv35407 Davidia involucrata HOM05D000475 ORTHO05D000343 3.1e-06 55.1 38 57.9
Migut.L02045 Erythranthe guttata HOM05D000475 ORTHO05D000343 3.1e-06 55.1 40 50.0
Peaxi162Scf00284g00231 Petunia axillaris HOM05D000475 ORTHO05D000343 3.1e-06 55.1 34 58.8
Prupe.6G285100 Prunus persica HOM05D000475 ORTHO05D000343 3.1e-06 55.1 39 48.7
AT5G01660 Arabidopsis thaliana HOM05D000475 ORTHO05D000343 4.0e-06 54.7 33 60.6
Gohir.A07G164778 Gossypium hirsutum HOM05D000475 ORTHO05D011666 4.0e-06 54.7 38 52.6
CANSAT56G0883 Cannabis sativa HOM05D000475 ORTHO05D000343 5.2e-06 54.3 33 63.6
Lsat_1_v5_gn_2_125761 Lactuca sativa HOM05D000475 ORTHO05D000343 5.2e-06 54.3 97 32.0
AL6G10390 Arabidopsis lyrata HOM05D000475 ORTHO05D000343 6.9e-06 53.9 33 60.6
vmacro06936 Vaccinium macrocarpon HOM05D000475 ORTHO05D000343 6.9e-06 53.9 124 25.8
CSS0035168 Camellia sinensis var. sinensis HOM05D000475 ORTHO05D000343 9.0e-06 53.5 35 57.1
ECA248G1682 Erigeron canadensis HOM05D000475 ORTHO05D000343 9.0e-06 53.5 37 54.1
SHI32529 Sapria himalayana HOM05D000475 ORTHO05D014148 9.0e-06 53.5 53 45.3
TWI77G0406 Tripterygium wilfordii HOM05D000475 ORTHO05D000343 9.0e-06 53.5 38 55.3


User provided reference genes

Program Settings