Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib084G1370 Durio zibethinus HOM05D006197 ORTHO05D007718 3.2e-86 321.6 153 100.0
Duzib205G0278 Durio zibethinus HOM05D006197 ORTHO05D007718 4.0e-36 155.2 93 80.6
Duzib068G0126 Durio zibethinus HOM05D006197 ORTHO05D007718 4.9e-34 148.3 93 78.5
Gorai.008G229000 Gossypium raimondii HOM05D006197 ORTHO05D007718 4.1e-33 145.2 93 77.4
Gohir.D08G180000 Gossypium hirsutum HOM05D006197 ORTHO05D007718 5.4e-33 144.8 93 76.3
Gorai.004G188500 Gossypium raimondii HOM05D006197 ORTHO05D007718 5.4e-33 144.8 93 76.3
Gohir.A04G000300 Gossypium hirsutum HOM05D006197 ORTHO05D007718 7.0e-33 144.4 93 76.3
Gohir.A08G159600 Gossypium hirsutum HOM05D006197 ORTHO05D007718 2.0e-32 142.9 93 75.3
Thecc.03G234100 Theobroma cacao HOM05D006197 ORTHO05D007718 3.9e-31 138.7 93 73.1
COL.COLO4_17110 Corchorus olitorius HOM05D006197 ORTHO05D007718 6.6e-31 137.9 93 71.0
Gohir.D12G213400 Gossypium hirsutum HOM05D006197 ORTHO05D007718 1.5e-30 136.7 93 73.1
CiPaw.11G087500 Carya illinoinensis HOM05D006197 ORTHO05D007718 4.1e-25 118.6 100 63.0
Cpa.g.sc6.409 Carica papaya HOM05D006197 ORTHO05D007718 5.4e-25 118.2 93 65.6
Eucgr.E00313 Eucalyptus grandis HOM05D006197 ORTHO05D007718 9.2e-25 117.5 97 62.9
PGR042G3581 Punica granatum HOM05D006197 ORTHO05D007718 1.2e-24 117.1 98 65.3
BcaC07g40434 Brassica carinata HOM05D006197 ORTHO05D007718 7.8e-24 114.4 93 59.1
THA.LOC104819961 Tarenaya hassleriana HOM05D006197 ORTHO05D007718 7.8e-24 114.4 100 62.0
BcaC07g40556 Brassica carinata HOM05D006197 ORTHO05D007718 1.0e-23 114.0 93 59.1
BcaC08g45013 Brassica carinata HOM05D006197 ORTHO05D007718 1.0e-23 114.0 93 59.1
A09p52120 Brassica napus HOM05D006197 ORTHO05D007718 1.0e-23 114.0 93 59.1
BolC6t37808H Brassica oleracea HOM05D006197 ORTHO05D007718 1.0e-23 114.0 93 59.1
Potri.001G146700 Populus trichocarpa HOM05D006197 ORTHO05D007718 1.3e-23 113.6 99 60.6
C06p26450 Brassica napus HOM05D006197 ORTHO05D007718 2.3e-23 112.8 93 58.1
CARHR170180 Cardamine hirsuta HOM05D006197 ORTHO05D007718 3.9e-23 112.1 93 58.1
Prupe.5G046200 Prunus persica HOM05D006197 ORTHO05D007718 3.9e-23 112.1 93 60.2
AL5G41940 Arabidopsis lyrata HOM05D006197 ORTHO05D007718 5.0e-23 111.7 98 60.2
AT3G59840 Arabidopsis thaliana HOM05D006197 ORTHO05D007718 5.0e-23 111.7 98 60.2
Carub.0005s2656 Capsella rubella HOM05D006197 ORTHO05D007718 5.0e-23 111.7 98 60.2
A07p24860 Brassica napus HOM05D006197 ORTHO05D007718 6.6e-23 111.3 94 59.6
BraA07t30130Z Brassica rapa HOM05D006197 ORTHO05D007718 6.6e-23 111.3 94 59.6
MD16G1269400 Malus domestica HOM05D006197 ORTHO05D007718 8.6e-23 110.9 97 62.9
GSVIVG01013230001 Vitis vinifera HOM05D006197 ORTHO05D007718 1.1e-22 110.5 99 60.6
Atru.chr6.1773 Acer truncatum HOM05D006197 ORTHO05D007718 1.9e-22 109.8 98 61.2
Manes.15G173000 Manihot esculenta HOM05D006197 ORTHO05D007718 1.9e-22 109.8 96 59.4
Cc00_g30230 Coffea canephora HOM05D006197 ORTHO05D007718 2.5e-22 109.4 103 60.2
Cc08_g01810 Coffea canephora HOM05D006197 ORTHO05D007718 2.5e-22 109.4 103 60.2
Cc00_g23310 Coffea canephora HOM05D006197 ORTHO05D007718 3.3e-22 109.0 103 59.2
TWI81G0993 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 3.3e-22 109.0 98 61.2
FAN04G1051 Fragaria x ananassa HOM05D006197 ORTHO05D007718 4.3e-22 108.6 97 63.9
Nitab4.5_0006693g0020 Nicotiana tabacum HOM05D006197 ORTHO05D007718 5.6e-22 108.2 107 56.1
Thhalv10006335m.g Eutrema salsugineum HOM05D006197 ORTHO05D007718 7.3e-22 107.8 98 55.1
Sabra01G0115400 Salix brachista HOM05D006197 ORTHO05D007718 7.3e-22 107.8 99 58.6
Sp5g03300 Schrenkiella parvula HOM05D006197 ORTHO05D007718 7.3e-22 107.8 98 56.1
BcaB02g07441 Brassica carinata HOM05D006197 ORTHO05D007718 1.2e-21 107.1 98 55.1
Cc00_g26570 Coffea canephora HOM05D006197 ORTHO05D007718 1.2e-21 107.1 103 58.3
Haze_08298 Corylus avellana HOM05D006197 ORTHO05D007718 1.2e-21 107.1 98 59.2
MBI11_g07528_MAGBIO Magnolia biondii HOM05D006197 ORTHO05D007718 1.2e-21 107.1 101 56.4
CANSAT64G2368 Cannabis sativa HOM05D006197 ORTHO05D007718 1.6e-21 106.7 66 78.8
Peaxi162Scf00084g00099 Petunia axillaris HOM05D006197 ORTHO05D007718 1.6e-21 106.7 92 57.6
Cc00_g31810 Coffea canephora HOM05D006197 ORTHO05D007718 2.1e-21 106.3 88 65.9
Lsat_1_v5_gn_6_66400 Lactuca sativa HOM05D006197 ORTHO05D007718 2.8e-21 105.9 92 58.7
SalBow1G7863 Salvia bowleyana HOM05D006197 ORTHO05D007718 2.8e-21 105.9 101 57.4
Nitab4.5_0002055g0120 Nicotiana tabacum HOM05D006197 ORTHO05D007718 3.6e-21 105.5 103 55.3
Sed0004723 Sechium edule HOM05D006197 ORTHO05D007718 4.7e-21 105.1 99 56.6
PGSC0003DMG400024214 Solanum tuberosum HOM05D006197 ORTHO05D007718 4.7e-21 105.1 104 55.8
BolC8t51081H Brassica oleracea HOM05D000403 ORTHO05D004426 6.2e-21 104.8 89 56.2
Nn1g03717 Nelumbo nucifera HOM05D006197 ORTHO05D007718 6.2e-21 104.8 95 56.8
Aa31LG10G14080 Aethionema arabicum HOM05D006197 ORTHO05D007718 8.1e-21 104.4 101 55.4
Ciclev10033154m.g Citrus clementina HOM05D006197 ORTHO05D007718 8.1e-21 104.4 103 56.3
RcHm_v2.0_Chr7g0208331 Rosa chinensis HOM05D006197 ORTHO05D007718 8.1e-21 104.4 66 77.3
Solyc08g077280.1 Solanum lycopersicum HOM05D006197 ORTHO05D007718 8.1e-21 104.4 103 53.4
Sopen05g026900 Solanum pennellii HOM05D006197 ORTHO05D007718 8.1e-21 104.4 104 54.8
Sopen08g025860 Solanum pennellii HOM05D006197 ORTHO05D007718 8.1e-21 104.4 104 54.8
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 1.1e-20 104.0 87 62.1
Cfa012386 Carpinus fangiana HOM05D006197 ORTHO05D007718 1.1e-20 104.0 98 58.2
FAN13G1034 Fragaria x ananassa HOM05D006197 ORTHO05D007718 1.1e-20 104.0 94 62.8
FAN18G0540 Fragaria x ananassa HOM05D006197 ORTHO05D007718 1.1e-20 104.0 94 61.7
QL12p007107 Quercus lobata HOM05D006197 ORTHO05D007718 1.4e-20 103.6 103 55.3
CSS0031892 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 1.8e-20 103.2 89 62.9
CSS0033989 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 1.8e-20 103.2 89 62.9
CSS0037645 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 1.8e-20 103.2 89 62.9
Oeu014592.2 Olea europaea HOM05D006197 ORTHO05D007718 2.3e-20 102.8 103 54.4
Sed0016057 Sechium edule HOM05D006197 ORTHO05D007718 3.1e-20 102.4 94 57.4
MBI02_g29718_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009071 4.0e-20 102.1 99 52.5
CsaV3_3G049530 Cucumis sativus L. HOM05D006197 ORTHO05D007718 8.9e-20 100.9 100 53.0
Dinv25183 Davidia involucrata HOM05D002285 ORTHO05D009255 8.9e-20 100.9 107 52.3
HanXRQChr08g0234831 Helianthus annuus HOM05D006197 ORTHO05D007718 8.9e-20 100.9 107 52.3
FAN08G0099 Fragaria x ananassa HOM05D006197 ORTHO05D007718 1.2e-19 100.5 95 63.2
TWI15G0656 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 1.2e-19 100.5 100 60.0
Hma1.2p1_0311F.1_g121310 Hydrangea macrophylla HOM05D006197 ORTHO05D007718 1.5e-19 100.1 101 56.4
ECA240G0414 Erigeron canadensis HOM05D006197 ORTHO05D007718 3.4e-19 99.0 107 54.2
AUR62007231 Chenopodium quinoa HOM05D006197 ORTHO05D007718 5.8e-19 98.2 97 58.8
PSO832G1675 Papaver somniferum HOM05D006197 ORTHO05D007718 7.5e-19 97.8 98 55.1
Dinv28915 Davidia involucrata HOM05D006197 ORTHO05D007718 9.8e-19 97.4 105 53.3
VMungo1215G1228 Vigna mungo HOM05D006197 ORTHO05D007718 1.3e-18 97.1 95 55.8
Cc08_g02050 Coffea canephora HOM05D006197 ORTHO05D007718 1.7e-18 96.7 73 69.9
PSO210G4997 Papaver somniferum HOM05D006197 ORTHO05D007718 2.2e-18 96.3 98 54.1
Phvul.002G004500 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 2.2e-18 96.3 96 56.2
EL10Ac5g12195 Beta vulgaris HOM05D006197 ORTHO05D007718 2.9e-18 95.9 77 63.6
Cc08_g01990 Coffea canephora HOM05D006197 ORTHO05D007718 2.9e-18 95.9 67 73.1
VMungo1215G3393 Vigna mungo HOM05D006197 ORTHO05D007718 2.9e-18 95.9 99 56.6
DCAR_008300 Daucus carota HOM05D006197 ORTHO05D007718 3.7e-18 95.5 99 53.5
Rhsim11G0011100 Rhododendron simsii HOM05D006197 ORTHO05D007718 3.7e-18 95.5 67 68.7
TAR624G0346 Trochodendron aralioides HOM05D006197 ORTHO05D007718 3.7e-18 95.5 96 49.0
arahy.Tifrunner.gnm1.ann1.M9L3KI Arachis hypogaea HOM05D006197 ORTHO05D007718 4.9e-18 95.1 105 52.4
arahy.Tifrunner.gnm1.ann1.PC0NS4 Arachis hypogaea HOM05D006197 ORTHO05D007718 4.9e-18 95.1 105 52.4
Aqoxy1G03814 Aquilegia oxysepala HOM05D006197 ORTHO05D007718 6.4e-18 94.7 100 50.0
Glyma.11G041000 Glycine max HOM05D006197 ORTHO05D007718 6.4e-18 94.7 94 58.5
Ah.12g053650 Amaranthus hybridus HOM05D006197 ORTHO05D007718 8.3e-18 94.4 86 60.5
Oeu006551.1 Olea europaea HOM05D006197 ORTHO05D007718 8.3e-18 94.4 100 53.0
AUR62018769 Chenopodium quinoa HOM05D006197 ORTHO05D007718 1.1e-17 94.0 86 62.8
Glyma.01G201200 Glycine max HOM05D006197 ORTHO05D007718 1.4e-17 93.6 100 53.0
Lalb_Chr09g0323941 Lupinus albus HOM05D006197 ORTHO05D007718 1.9e-17 93.2 72 68.1
Migut.N01790 Erythranthe guttata HOM05D006197 ORTHO05D007718 3.2e-17 92.4 88 60.2
Medtr5g013975 Medicago truncatula HOM05D006197 ORTHO05D007718 3.2e-17 92.4 108 52.8
Lj2g0021118 Lotus japonicus HOM05D006197 ORTHO05D007718 4.1e-17 92.0 68 70.6
MELO3C003373.2 Cucumis melo HOM05D006197 ORTHO05D007718 5.4e-17 91.7 100 50.0
Sc01g0007760 Simmondsia chinensis HOM05D006197 ORTHO05D007718 5.4e-17 91.7 66 69.7
Psat2g174760 Pisum sativum HOM05D006197 ORTHO05D007718 9.2e-17 90.9 67 70.1
unitig_747.g21291 Utricularia gibba HOM05D006197 ORTHO05D007718 4.6e-16 88.6 98 50.0
Ca_24632_v3 Cicer arietinum L. HOM05D006197 ORTHO05D007718 6.0e-16 88.2 67 67.2
TPR.G6747 Trifolium pratense HOM05D006197 ORTHO05D007718 6.0e-16 88.2 62 66.1
Cc08_g01910 Coffea canephora HOM05D006197 ORTHO05D007718 1.3e-15 87.0 93 52.7
ATR1088G052 Amborella trichopoda HOM05D006197 ORTHO05D007718 3.0e-15 85.9 87 56.3
Phvul.002G003700 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 3.3e-14 82.4 96 51.0
AagrBONN_evm.TU.Sc2ySwM_368.296 Anthoceros agrestis HOM05D006197 ORTHO05D007718 4.7e-13 78.6 71 49.3
Eucgr.C01972 Eucalyptus grandis HOM05D006197 ORTHO05D007718 2.3e-12 76.3 70 51.4
Mapoly0127s0016 Marchantia polymorpha HOM05D006197 ORTHO05D007718 8.9e-12 74.3 75 49.3
Os05g0500450 Oryza sativa ssp. japonica HOM05D006197 ORTHO05D007718 9.9e-11 70.9 67 53.7
Pp3c14_9970 Physcomitrium patens HOM05D006197 ORTHO05D007718 1.7e-10 70.1 95 41.1
Mapoly0046s0110 Marchantia polymorpha HOM05D006197 ORTHO05D007718 6.4e-10 68.2 58 55.2
CBR_g8168 Chara braunii HOM05D006197 ORTHO05D007718 1.1e-09 67.4 52 59.6
CAN.G799.18 Capsicum annuum HOM05D006197 ORTHO05D007718 9.2e-09 64.3 55 60.0
Nn1g08520 Nelumbo nucifera HOM05D006197 ORTHO05D007718 1.6e-08 63.5 85 43.5
SMO119G0374 Selaginella moellendorffii HOM05D006197 ORTHO05D007718 2.3e-07 59.7 55 56.4
Cc08_g01940 Coffea canephora HOM05D000011 ORTHO05D000157 2.5e-06 56.2 32 78.1


User provided reference genes

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