Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 2.7e-135 485.3 242 100.0
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 1.5e-117 426.4 244 88.1
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 6.6e-110 401.0 234 85.5
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 1.2e-108 396.7 234 83.8
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 4.7e-108 394.8 247 80.6
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 8.0e-108 394.0 247 80.6
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 4.4e-106 388.3 247 80.2
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 1.7e-105 386.3 244 78.3
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 4.9e-105 384.8 244 78.7
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 6.4e-105 384.4 244 79.1
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 4.1e-104 381.7 244 78.3
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 1.2e-103 380.2 244 77.9
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 1.6e-103 379.8 238 79.4
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.7e-103 379.0 244 78.3
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 7.8e-103 377.5 245 78.8
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 1.0e-102 377.1 244 77.5
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 1.0e-102 377.1 248 77.4
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 1.0e-102 377.1 244 78.3
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.3e-102 376.7 248 77.0
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 3.0e-102 375.6 244 76.2
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 3.9e-102 375.2 244 77.9
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 5.1e-102 374.8 248 76.6
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.1e-101 373.6 244 77.0
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 1.9e-101 372.9 239 78.7
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 3.3e-101 372.1 240 77.9
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 5.6e-101 371.3 248 74.6
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 2.8e-100 369.0 240 76.2
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 2.8e-100 369.0 239 78.2
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 1.1e-99 367.1 237 78.5
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 1.8e-99 366.3 239 78.2
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 1.8e-99 366.3 239 75.3
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 2.3e-99 365.9 238 74.8
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 6.8e-99 364.4 244 74.6
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 8.9e-99 364.0 237 76.8
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 9.9e-98 360.5 245 73.1
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 1.3e-97 360.1 245 73.5
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 4.9e-97 358.2 243 74.5
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 4.9e-97 358.2 242 75.2
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 7.1e-96 354.4 247 71.7
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 9.2e-96 354.0 241 73.4
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 1.6e-95 353.2 237 73.8
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 6.0e-95 351.3 230 76.1
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 7.8e-95 350.9 230 75.2
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 1.0e-94 350.5 237 72.6
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 1.3e-94 350.1 244 72.1
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 2.3e-94 349.4 237 72.2
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 3.0e-94 349.0 237 73.0
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 1.9e-93 346.3 306 60.8
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 7.3e-93 344.4 247 70.0
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 1.6e-92 343.2 240 71.7
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 2.1e-92 342.8 234 73.1
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 3.6e-92 342.0 239 71.1
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 4.7e-92 341.7 234 73.9
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 4.7e-92 341.7 238 72.7
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 1.1e-91 340.5 240 70.8
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 3.1e-91 339.0 247 68.8
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 5.2e-91 338.2 238 72.7
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 6.8e-91 337.8 218 75.2
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 1.2e-90 337.0 243 69.5
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 1.5e-90 336.7 235 70.6
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 2.6e-90 335.9 218 75.7
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 3.4e-90 335.5 248 70.2
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 5.8e-90 334.7 241 71.0
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 5.8e-90 334.7 238 69.7
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 9.9e-90 334.0 239 69.5
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 9.9e-90 334.0 230 72.6
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 2.2e-89 332.8 234 71.4
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 2.2e-89 332.8 234 70.1
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 4.9e-89 331.6 237 70.0
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 6.4e-89 331.3 239 69.0
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 1.1e-88 330.5 220 74.1
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 1.4e-88 330.1 239 71.1
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 1.2e-87 327.0 242 69.0
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 3.5e-87 325.5 233 71.7
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 4.6e-87 325.1 241 68.0
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 1.7e-86 323.2 240 70.0
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 3.9e-86 322.0 287 59.9
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 1.1e-85 320.5 194 79.4
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 4.3e-85 318.5 238 68.5
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 1.3e-84 317.0 193 79.8
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 1.6e-84 316.6 220 71.8
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 2.1e-84 316.2 230 67.0
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 3.6e-84 315.5 241 66.0
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 4.8e-84 315.1 210 74.8
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 1.8e-83 313.2 233 68.2
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 4.0e-83 312.0 220 70.9
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 4.0e-83 312.0 232 68.5
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 5.3e-83 311.6 193 77.2
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 6.9e-83 311.2 188 80.9
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 1.2e-82 310.5 193 78.2
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 5.8e-82 308.1 229 68.6
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 6.4e-81 304.7 220 69.5
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 1.1e-80 303.9 233 66.5
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 1.1e-80 303.9 236 65.7
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 1.1e-80 303.9 236 65.7
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 2.4e-80 302.8 238 66.0
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 2.4e-80 302.8 238 66.0
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 1.6e-79 300.1 233 64.8
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 2.3e-78 296.2 204 72.1
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 2.5e-77 292.7 218 67.0
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 1.5e-74 283.5 242 59.9
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 2.0e-74 283.1 238 61.8
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 1.9e-72 276.6 221 62.0
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 7.1e-72 274.6 195 69.7
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 2.5e-69 266.2 211 65.9
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 1.6e-68 263.5 205 67.3
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 2.1e-68 263.1 198 67.2
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 5.3e-67 258.5 277 56.0
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.7e-65 253.4 144 84.7
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 4.3e-61 238.8 220 54.1
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 4.8e-60 235.3 239 51.9
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 3.5e-55 219.2 222 52.3
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 7.9e-55 218.0 183 59.0
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 3.0e-54 216.1 191 57.6
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 3.9e-54 215.7 141 73.8
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 1.9e-53 213.4 244 48.4
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 6.3e-52 208.4 128 77.3
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 2.5e-32 143.3 182 44.5
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 8.2e-28 128.3 92 72.8
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 1.6e-26 124.0 199 39.2
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 2.3e-22 110.2 253 32.0
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 5.7e-21 105.5 169 39.6
PRCOL_00006636 Prasinoderma coloniale HOM05D006286 ORTHO05D007741 5.4e-19 99.0 198 35.9
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 1.4e-14 84.3 48 81.2
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 2.3e-14 83.6 61 67.2
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 6.8e-14 82.0 52 76.9
SEGI_15131 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 2.5e-08 63.5 34 79.4
MCO01G267 Micromonas commoda HOM05D049972 ORTHO05D049270 8.9e-06 55.1 215 23.3
MCO03G036 Micromonas commoda HOM05D037152 ORTHO05D034124 8.9e-06 55.1 265 24.9


User provided reference genes

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