Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib084G1107 Durio zibethinus HOM05D000087 ORTHO05D005735 3.0e-249 864.8 445 100.0
Thecc.03G213700 Theobroma cacao HOM05D000087 ORTHO05D005735 9.4e-163 577.4 453 71.3
Duzib068G0232 Durio zibethinus HOM05D000087 ORTHO05D005735 2.3e-156 556.2 421 71.0
Gohir.A08G107500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 2.1e-146 523.1 419 68.3
Gohir.D08G120500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 4.7e-146 521.9 419 68.3
Gorai.004G127300 Gossypium raimondii HOM05D000087 ORTHO05D005735 3.1e-145 519.2 419 68.0
COL.COLO4_10863 Corchorus olitorius HOM05D000087 ORTHO05D005735 3.3e-107 392.9 326 64.4
GSVIVG01019707001 Vitis vinifera HOM05D000087 ORTHO05D005735 1.4e-102 377.5 451 48.8
MD06G1127500 Malus domestica HOM05D000087 ORTHO05D005735 5.8e-96 355.5 444 46.6
Haze_09232 Corylus avellana HOM05D000087 ORTHO05D005735 1.7e-95 354.0 423 48.0
Dinv11465 Davidia involucrata HOM05D000087 ORTHO05D005735 2.2e-95 353.6 441 49.7
Ciclev10018581m.g Citrus clementina HOM05D000087 ORTHO05D005735 8.4e-95 351.7 450 47.1
Prupe.5G137300 Prunus persica HOM05D000087 ORTHO05D005735 5.5e-94 349.0 442 47.3
Cfa011874 Carpinus fangiana HOM05D000087 ORTHO05D005735 7.1e-94 348.6 448 46.9
Sabra16G0307100 Salix brachista HOM05D000087 ORTHO05D005735 4.6e-93 345.9 422 49.1
RcHm_v2.0_Chr7g0188131 Rosa chinensis HOM05D000087 ORTHO05D005735 1.0e-92 344.7 444 48.9
FvH4_5g10170 Fragaria vesca HOM05D000087 ORTHO05D005735 1.3e-92 344.4 444 48.2
Manes.17G015000 Manihot esculenta HOM05D000087 ORTHO05D005735 2.3e-92 343.6 430 47.4
Potri.001G454200 Populus trichocarpa HOM05D000087 ORTHO05D005735 5.7e-91 339.0 422 49.3
FAN08G3226 Fragaria x ananassa HOM05D000087 ORTHO05D005735 2.8e-90 336.7 444 47.3
TWI81G0850 Tripterygium wilfordii HOM05D000087 ORTHO05D005735 2.4e-89 333.6 422 49.1
TAR629G0355 Trochodendron aralioides HOM05D000087 ORTHO05D005735 6.9e-89 332.0 427 45.4
FAN04G3195 Fragaria x ananassa HOM05D000087 ORTHO05D005735 9.0e-89 331.6 442 46.8
QL02p026653 Quercus lobata HOM05D000087 ORTHO05D005735 5.0e-87 325.9 433 48.3
FAN18G0494 Fragaria x ananassa HOM05D000087 ORTHO05D005735 8.4e-87 325.1 422 48.1
Hma1.2p1_0198F.1_g085370 Hydrangea macrophylla HOM05D000087 ORTHO05D005735 3.2e-86 323.2 452 42.5
Actinidia22240 Actinidia chinensis HOM05D000087 ORTHO05D005735 9.3e-86 321.6 452 44.9
FAN18G4270 Fragaria x ananassa HOM05D000087 ORTHO05D005735 3.5e-85 319.7 422 47.9
Cpa.g.sc37.117 Carica papaya HOM05D000087 ORTHO05D005735 1.0e-84 318.2 433 46.0
PGR031G2531 Punica granatum HOM05D000087 ORTHO05D005735 2.3e-84 317.0 428 46.0
Rhsim02G0255700 Rhododendron simsii HOM05D000087 ORTHO05D005735 5.1e-84 315.8 459 44.9
Eucgr.D02539 Eucalyptus grandis HOM05D000087 ORTHO05D005735 6.9e-81 305.4 428 42.5
AUR62039113 Chenopodium quinoa HOM05D000087 ORTHO05D005735 1.6e-77 294.3 444 38.5
CsaV3_5G001350 Cucumis sativus L. HOM05D000087 ORTHO05D005735 2.7e-77 293.5 446 41.9
THA.LOC104806594 Tarenaya hassleriana HOM05D000087 ORTHO05D005735 3.0e-76 290.0 450 42.4
Lj2C147G10 Lonicera japonica HOM05D000087 ORTHO05D005735 8.8e-76 288.5 429 42.7
AUR62009145 Chenopodium quinoa HOM05D000087 ORTHO05D005735 2.0e-75 287.3 444 38.5
EL10Ac2g03880 Beta vulgaris HOM05D000087 ORTHO05D005735 2.2e-74 283.9 457 38.5
Nn3g18737 Nelumbo nucifera HOM05D000087 ORTHO05D005735 1.1e-73 281.6 451 40.6
PSO063G0654 Papaver somniferum HOM05D000087 ORTHO05D005735 7.7e-72 275.4 426 40.4
Thhalv10024269m.g Eutrema salsugineum HOM05D000087 ORTHO05D005735 1.7e-71 274.2 404 43.6
Sed0004639 Sechium edule HOM05D000087 ORTHO05D005735 2.2e-71 273.9 446 40.1
Carub.0007s0001 Capsella rubella HOM05D000087 ORTHO05D005735 2.9e-71 273.5 425 41.6
Hund03336 Selenicereus undatus HOM05D000087 ORTHO05D005735 2.1e-69 267.3 444 39.2
PSO782G2195 Papaver somniferum HOM05D000087 ORTHO05D005735 2.7e-69 266.9 426 39.4
C01p21480 Brassica napus HOM05D000087 ORTHO05D005735 7.9e-69 265.4 452 40.5
BolC1t02068H Brassica oleracea HOM05D000087 ORTHO05D005735 7.9e-69 265.4 452 40.5
CANSAT64G2851 Cannabis sativa HOM05D000087 ORTHO05D005735 1.8e-68 264.2 438 44.3
Glyma.06G181000 Glycine max HOM05D000087 ORTHO05D005735 1.8e-68 264.2 425 38.4
Sp7g37630 Schrenkiella parvula HOM05D000087 ORTHO05D005735 2.3e-68 263.8 428 42.3
Psat5g111000 Pisum sativum HOM05D000087 ORTHO05D005735 1.1e-67 261.5 425 38.4
AT4G38120 Arabidopsis thaliana HOM05D000087 ORTHO05D005735 1.5e-67 261.2 427 40.5
MELO3C005812.2 Cucumis melo HOM05D000087 ORTHO05D005735 9.7e-67 258.5 520 36.5
Lj6g0001276 Lotus japonicus HOM05D000087 ORTHO05D005735 1.3e-66 258.1 455 37.8
AL7G10010 Arabidopsis lyrata HOM05D000087 ORTHO05D005735 1.7e-66 257.7 427 41.0
arahy.Tifrunner.gnm1.ann1.DH86LW Arachis hypogaea HOM05D000087 ORTHO05D005735 1.7e-66 257.7 429 39.4
Sc01g0010950 Simmondsia chinensis HOM05D000087 ORTHO05D005735 2.2e-66 257.3 405 40.5
Medtr3g080640 Medicago truncatula HOM05D000087 ORTHO05D005735 4.8e-66 256.1 421 38.0
A01p17150 Brassica napus HOM05D000087 ORTHO05D005735 6.3e-66 255.8 452 40.7
ClCG01G001230 Citrullus lanatus HOM05D000087 ORTHO05D005735 1.1e-65 255.0 530 34.0
BraA01t01671Z Brassica rapa HOM05D000087 ORTHO05D005735 1.8e-65 254.2 456 40.4
Lalb_Chr14g0362591 Lupinus albus HOM05D000087 ORTHO05D005735 3.5e-64 250.0 455 37.6
ECA246G1365 Erigeron canadensis HOM05D000087 ORTHO05D005735 2.9e-63 246.9 455 37.4
HanXRQChr01g0016041 Helianthus annuus HOM05D000087 ORTHO05D005735 8.8e-60 235.3 421 38.0
Oeu019648.1 Olea europaea HOM05D000087 ORTHO05D005735 8.8e-60 235.3 415 38.6
Migut.H02249 Erythranthe guttata HOM05D000087 ORTHO05D005735 1.7e-58 231.1 428 38.6
arahy.Tifrunner.gnm1.ann1.0XGN9Z Arachis hypogaea HOM05D000087 ORTHO05D005735 2.2e-58 230.7 435 37.0
Ca_16291_v3 Cicer arietinum L. HOM05D000087 ORTHO05D005735 8.2e-58 228.8 453 34.0
SGA_v2.0_scaffold123G33449 Striga asiatica HOM05D000087 ORTHO05D005735 4.5e-56 223.0 438 37.7
vmacro08520 Vaccinium macrocarpon HOM05D000087 ORTHO05D005735 1.0e-55 221.9 383 40.7
Aqoxy5G04397 Aquilegia oxysepala HOM05D000087 ORTHO05D005735 1.7e-55 221.1 440 38.0
Aa31LG6G16960 Aethionema arabicum HOM05D000087 ORTHO05D005735 3.2e-54 216.9 450 35.3
MBI04_g04806_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 4.2e-54 216.5 409 37.9
ATR0579G142 Amborella trichopoda HOM05D000087 ORTHO05D005735 7.2e-54 215.7 438 32.4
Nitab4.5_0007502g0010 Nicotiana tabacum HOM05D000087 ORTHO05D005735 2.7e-53 213.8 366 36.6
MSTRG.22476 Avicennia marina HOM05D000087 ORTHO05D005735 4.0e-52 209.9 436 36.0
Cc08_g17160 Coffea canephora HOM05D000087 ORTHO05D005735 1.2e-51 208.4 401 35.4
Sopen07g004380 Solanum pennellii HOM05D000087 ORTHO05D005735 4.4e-51 206.5 366 36.9
Solyc07g008450.3 Solanum lycopersicum HOM05D000087 ORTHO05D005735 9.8e-51 205.3 366 36.6
CAN.G1548.2 Capsicum annuum HOM05D000087 ORTHO05D005735 1.3e-50 204.9 367 37.6
Nitab4.5_0000491g0190 Nicotiana tabacum HOM05D000087 ORTHO05D005735 9.1e-49 198.7 367 37.1
Phvul.011G167550 Phaseolus vulgaris HOM05D000087 ORTHO05D005735 2.0e-48 197.6 315 41.0
Lsat_1_v5_gn_3_13301 Lactuca sativa HOM05D000087 ORTHO05D005735 1.2e-43 181.8 417 34.1
Peaxi162Scf00046g00228 Petunia axillaris HOM05D000087 ORTHO05D005735 2.0e-43 181.0 369 35.0
Zm00001eb416210 Zea mays HOM05D000087 ORTHO05D005735 1.4e-41 174.9 413 30.3
HPP92_028198 Vanilla planifolia HOM05D000087 ORTHO05D005735 9.1e-41 172.2 385 33.8
AL8G10020 Arabidopsis lyrata HOM05D000087 ORTHO05D005735 1.3e-39 168.3 255 41.2
CiPaw.11G106300 Carya illinoinensis HOM05D000087 ORTHO05D005735 6.6e-39 166.0 216 42.1
MD14G1142800 Malus domestica HOM05D000087 ORTHO05D005735 1.2e-37 161.8 210 41.9
MD14G1142900 Malus domestica HOM05D000087 ORTHO05D005735 2.9e-34 150.6 134 56.0
CDE02G0276 Ceratophyllum demersum HOM05D000087 ORTHO05D005735 9.2e-33 145.6 313 31.9
DCAR_010123 Daucus carota HOM05D000087 ORTHO05D005735 3.9e-31 140.2 260 35.4
CiPaw.11G106200 Carya illinoinensis HOM05D000087 ORTHO05D005735 3.6e-29 133.7 140 51.4
Pp3c3_37190 Physcomitrium patens HOM05D000087 ORTHO05D005735 6.4e-26 122.9 447 27.7
SalBow4G1355 Salvia bowleyana HOM05D000087 ORTHO05D005735 7.0e-25 119.4 311 30.9
Mapoly0043s0141 Marchantia polymorpha HOM05D000087 ORTHO05D005735 6.8e-20 102.8 266 29.3
SMO367G1062 Selaginella moellendorffii HOM05D000087 ORTHO05D005735 2.0e-19 101.3 258 30.6
vmacro08519 Vaccinium macrocarpon HOM05D000087 ORTHO05D005735 5.4e-17 93.2 72 65.3
AUR62009162 Chenopodium quinoa HOM05D000087 ORTHO05D005735 7.1e-17 92.8 70 62.9
SEGI_26806 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 1.4e-12 78.6 215 27.9
CBR_g3175 Chara braunii HOM05D000087 ORTHO05D005735 8.9e-12 75.9 80 45.0
CSS0029196 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 1.9e-09 68.2 48 66.7
VMungo1127G1440 Vigna mungo HOM05D000087 ORTHO05D005735 7.1e-09 66.2 99 35.4
RcHm_v2.0_Chr7g0188101 Rosa chinensis HOM05D000087 ORTHO05D005735 1.2e-08 65.5 89 40.4
CSS0025060 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 1.3e-07 62.0 92 38.0
Cre03.g166600 Chlamydomonas reinhardtii HOM05D000087 ORTHO05D005735 1.9e-06 58.2 77 35.1


User provided reference genes

Program Settings