Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib084G1091 Durio zibethinus HOM05D004417 ORTHO05D005528 3.6e-51 204.5 96 100.0
Duzib251G0182 Durio zibethinus HOM05D004417 ORTHO05D005528 5.2e-34 147.5 84 84.5
COL.COLO4_13080 Corchorus olitorius HOM05D004417 ORTHO05D005528 1.5e-33 146.0 84 82.1
ClCG01G006440 Citrullus lanatus HOM05D004417 ORTHO05D005528 1.4e-31 139.4 91 73.6
Gohir.A03G118100 Gossypium hirsutum HOM05D004417 ORTHO05D005528 1.9e-31 139.0 84 76.2
Prupe.1G331400 Prunus persica HOM05D004417 ORTHO05D005528 1.9e-31 139.0 84 76.2
Gohir.D02G141800 Gossypium hirsutum HOM05D004417 ORTHO05D005528 2.4e-31 138.7 84 76.2
Gorai.005G158900 Gossypium raimondii HOM05D004417 ORTHO05D005528 2.4e-31 138.7 84 76.2
Atru.chr11.518 Acer truncatum HOM05D004417 ORTHO05D005528 7.0e-31 137.1 84 77.4
Ciclev10014030m.g Citrus clementina HOM05D004417 ORTHO05D005528 7.0e-31 137.1 84 75.0
CANSAT01G0135 Cannabis sativa HOM05D004417 ORTHO05D005528 9.2e-31 136.7 84 75.0
Manes.17G082000 Manihot esculenta HOM05D004417 ORTHO05D005528 9.2e-31 136.7 84 75.0
QL03p034852 Quercus lobata HOM05D004417 ORTHO05D005528 1.2e-30 136.3 84 73.8
TAR374G0310 Trochodendron aralioides HOM05D004417 ORTHO05D005528 1.2e-30 136.3 84 75.0
Psat6g045000 Pisum sativum HOM05D004417 ORTHO05D005528 4.6e-30 134.4 84 72.6
Sed0000894 Sechium edule HOM05D004417 ORTHO05D005528 6.0e-30 134.0 84 75.0
Thecc.02G290300 Theobroma cacao HOM05D004417 ORTHO05D005528 1.3e-29 132.9 84 75.0
TPR.G36876 Trifolium pratense HOM05D004417 ORTHO05D005528 1.3e-29 132.9 84 75.0
TWI74G0839 Tripterygium wilfordii HOM05D004417 ORTHO05D005528 1.3e-29 132.9 84 73.8
MD13G1030100 Malus domestica HOM05D004417 ORTHO05D005528 1.7e-29 132.5 78 78.2
CsaV3_5G028240 Cucumis sativus L. HOM05D004417 ORTHO05D005528 2.3e-29 132.1 84 73.8
Lalb_Chr13g0290691 Lupinus albus HOM05D004417 ORTHO05D005528 2.3e-29 132.1 84 73.8
RcHm_v2.0_Chr4g0443371 Rosa chinensis HOM05D004417 ORTHO05D005528 2.3e-29 132.1 84 73.8
Eucgr.B02949 Eucalyptus grandis HOM05D004417 ORTHO05D005528 3.9e-29 131.3 81 77.8
PGR042G2175 Punica granatum HOM05D004417 ORTHO05D005528 3.9e-29 131.3 84 75.0
Medtr1g031910 Medicago truncatula HOM05D004417 ORTHO05D005528 5.0e-29 131.0 84 72.6
SalBow8G1470 Salvia bowleyana HOM05D004417 ORTHO05D005528 5.0e-29 131.0 84 70.2
GSVIVG01011680001 Vitis vinifera HOM05D004417 ORTHO05D005528 5.0e-29 131.0 84 73.8
FAN07G1109 Fragaria x ananassa HOM05D004417 ORTHO05D005528 6.6e-29 130.6 84 72.6
Phvul.003G021100 Phaseolus vulgaris HOM05D004417 ORTHO05D005528 6.6e-29 130.6 84 71.4
FvH4_4g33860 Fragaria vesca HOM05D004417 ORTHO05D005528 8.6e-29 130.2 84 72.6
FAN12G0749 Fragaria x ananassa HOM05D004417 ORTHO05D005528 8.6e-29 130.2 84 72.6
Nn4g24297 Nelumbo nucifera HOM05D004417 ORTHO05D005528 8.6e-29 130.2 84 71.4
Ca_12568_v3 Cicer arietinum L. HOM05D004417 ORTHO05D005528 1.1e-28 129.8 84 71.4
Migut.L00554 Erythranthe guttata HOM05D004417 ORTHO05D005528 1.1e-28 129.8 84 70.2
Aa31LG7G7270 Aethionema arabicum HOM05D004417 ORTHO05D005528 1.5e-28 129.4 84 71.4
arahy.Tifrunner.gnm1.ann1.GYT9TN Arachis hypogaea HOM05D004417 ORTHO05D005528 1.5e-28 129.4 84 70.2
CiPaw.05G190700 Carya illinoinensis HOM05D004417 ORTHO05D005528 1.5e-28 129.4 79 73.4
Eucgr.B02952 Eucalyptus grandis HOM05D004417 ORTHO05D005528 1.9e-28 129.0 81 76.5
PGR042G0049 Punica granatum HOM05D004417 ORTHO05D005528 1.9e-28 129.0 84 73.8
FAN17G2093 Fragaria x ananassa HOM05D004417 ORTHO05D005528 2.5e-28 128.6 78 76.9
PSO017G2325 Papaver somniferum HOM05D004417 ORTHO05D005528 3.3e-28 128.3 85 67.1
PSO478G2641 Papaver somniferum HOM05D004417 ORTHO05D005528 3.3e-28 128.3 85 67.1
Oeu018613.1 Olea europaea HOM05D004417 ORTHO05D005528 5.6e-28 127.5 84 67.9
AUR62014157 Chenopodium quinoa HOM05D004417 ORTHO05D005528 7.3e-28 127.1 84 70.2
AUR62038465 Chenopodium quinoa HOM05D004417 ORTHO05D005528 7.3e-28 127.1 84 70.2
Ah.03g137400 Amaranthus hybridus HOM05D004417 ORTHO05D005528 1.6e-27 125.9 84 69.0
Lalb_Chr16g0387721 Lupinus albus HOM05D004417 ORTHO05D005528 1.6e-27 125.9 84 70.2
EL10Ac6g14152 Beta vulgaris HOM05D004417 ORTHO05D005528 2.1e-27 125.6 84 69.0
Glyma.09G123500 Glycine max HOM05D004417 ORTHO05D005528 2.1e-27 125.6 84 69.0
Lj2g0013863 Lotus japonicus HOM05D004417 ORTHO05D005528 2.8e-27 125.2 84 70.2
CSS0030927 Camellia sinensis var. sinensis HOM05D004417 ORTHO05D005528 3.6e-27 124.8 80 71.2
MD16G1020900 Malus domestica HOM05D004417 ORTHO05D005528 3.6e-27 124.8 84 69.0
Sc14g0006960 Simmondsia chinensis HOM05D004417 ORTHO05D005528 3.6e-27 124.8 83 72.3
Nitab4.5_0000018g0020 Nicotiana tabacum HOM05D004417 ORTHO05D005528 6.2e-27 124.0 84 67.9
THA.LOC104822992 Tarenaya hassleriana HOM05D004417 ORTHO05D005528 8.0e-27 123.6 77 75.3
Solyc05g016440.3 Solanum lycopersicum HOM05D004417 ORTHO05D005528 1.1e-26 123.2 84 69.0
Sopen05g013790 Solanum pennellii HOM05D004417 ORTHO05D005528 1.1e-26 123.2 84 69.0
Dinv18635 Davidia involucrata HOM05D004417 ORTHO05D005528 1.4e-26 122.9 84 66.7
Dinv26250 Davidia involucrata HOM05D004417 ORTHO05D005528 1.4e-26 122.9 84 66.7
DCAR_007321 Daucus carota HOM05D004417 ORTHO05D005528 1.8e-26 122.5 84 67.9
Lsat_1_v5_gn_3_55840 Lactuca sativa HOM05D004417 ORTHO05D005528 2.3e-26 122.1 84 66.7
Rhsim09G0063500 Rhododendron simsii HOM05D004417 ORTHO05D005528 2.3e-26 122.1 81 69.1
Actinidia25661 Actinidia chinensis HOM05D004417 ORTHO05D005528 4.0e-26 121.3 84 67.9
Actinidia25877 Actinidia chinensis HOM05D004417 ORTHO05D005528 4.0e-26 121.3 84 67.9
Cc11_g08040 Coffea canephora HOM05D004417 ORTHO05D005528 4.0e-26 121.3 84 66.7
Potri.008G133300 Populus trichocarpa HOM05D004417 ORTHO05D005528 4.0e-26 121.3 84 67.9
HanXRQChr17g0567351 Helianthus annuus HOM05D004417 ORTHO05D005528 6.8e-26 120.6 84 65.5
Hund24934 Selenicereus undatus HOM05D004417 ORTHO05D005528 1.2e-25 119.8 80 68.8
MSTRG.7613 Avicennia marina HOM05D004417 ORTHO05D005528 1.5e-25 119.4 84 65.5
vmacro00393 Vaccinium macrocarpon HOM05D004417 ORTHO05D005528 1.5e-25 119.4 80 67.5
BcaC06g35029 Brassica carinata HOM05D004417 ORTHO05D005528 2.0e-25 119.0 76 69.7
Sabra08G0101900 Salix brachista HOM05D004417 ORTHO05D005528 3.4e-25 118.2 84 65.5
BcaB03g14154 Brassica carinata HOM05D004417 ORTHO05D005528 4.4e-25 117.9 76 68.4
A07p13940 Brassica napus HOM05D004417 ORTHO05D005528 4.4e-25 117.9 76 68.4
C07p20490 Brassica napus HOM05D004417 ORTHO05D005528 4.4e-25 117.9 76 68.4
BolC7t42575H Brassica oleracea HOM05D004417 ORTHO05D005528 4.4e-25 117.9 76 68.4
BraA07t29150Z Brassica rapa HOM05D004417 ORTHO05D005528 4.4e-25 117.9 76 68.4
ECA246G0702 Erigeron canadensis HOM05D004417 ORTHO05D005528 4.4e-25 117.9 84 65.5
Sp1g20700 Schrenkiella parvula HOM05D004417 ORTHO05D005528 4.4e-25 117.9 77 68.8
Lj3A865G68 Lonicera japonica HOM05D004417 ORTHO05D005528 9.8e-25 116.7 84 66.7
CARHR023690 Cardamine hirsuta HOM05D004417 ORTHO05D005528 2.2e-24 115.5 78 67.9
Peaxi162Scf00376g00032 Petunia axillaris HOM05D004417 ORTHO05D005528 4.9e-24 114.4 98 58.2
CDE07G0372 Ceratophyllum demersum HOM05D004417 ORTHO05D005528 6.4e-24 114.0 84 65.5
SHI04465 Sapria himalayana HOM05D004417 ORTHO05D005528 1.1e-23 113.2 78 62.8
Thhalv10006548m.g Eutrema salsugineum HOM05D004417 ORTHO05D005528 1.4e-23 112.8 77 68.8
Aqoxy3G00033 Aquilegia oxysepala HOM05D004417 ORTHO05D005528 1.9e-23 112.5 80 63.8
AL1G37020 Arabidopsis lyrata HOM05D004417 ORTHO05D005528 1.9e-23 112.5 81 65.4
AT1G23230 Arabidopsis thaliana HOM05D004417 ORTHO05D005528 4.1e-23 111.3 81 64.2
Carub.0001s2282 Capsella rubella HOM05D004417 ORTHO05D005528 5.4e-23 110.9 81 64.2
ATR0753G138 Amborella trichopoda HOM05D004417 ORTHO05D005528 1.2e-22 109.8 82 62.2
HanXRQChr17g0566691 Helianthus annuus HOM05D004417 ORTHO05D005528 2.1e-22 109.0 84 58.3
DCAR_030256 Daucus carota HOM05D004417 ORTHO05D005528 4.6e-22 107.8 84 59.5
Zm00001eb253700 Zea mays HOM05D004417 ORTHO05D005528 4.6e-22 107.8 80 67.5
Os02g0732700 Oryza sativa ssp. japonica HOM05D004417 ORTHO05D005528 7.8e-22 107.1 80 66.2
BcaB07g32312 Brassica carinata HOM05D004417 ORTHO05D005528 2.3e-21 105.5 77 64.9
BcaC05g26233 Brassica carinata HOM05D004417 ORTHO05D005528 2.3e-21 105.5 77 64.9
BolC5t30944H Brassica oleracea HOM05D004417 ORTHO05D005528 2.3e-21 105.5 77 64.9
A09p41530 Brassica napus HOM05D004417 ORTHO05D005528 3.9e-21 104.8 77 63.6
C05p22460 Brassica napus HOM05D004417 ORTHO05D005528 6.6e-21 104.0 77 63.6
Lsat_1_v5_gn_4_12821 Lactuca sativa HOM05D004417 ORTHO05D005528 6.6e-21 104.0 85 57.6
BcaB07g32314 Brassica carinata HOM05D004417 ORTHO05D005528 8.6e-21 103.6 77 64.9
MELO3C005286.2 Cucumis melo HOM05D004417 ORTHO05D005528 1.1e-20 103.2 116 50.0
BraA09t39644Z Brassica rapa HOM05D004417 ORTHO05D005528 1.5e-20 102.8 77 62.3
VMungo1215G0458 Vigna mungo HOM05D004417 ORTHO05D005528 2.5e-20 102.1 67 68.7
SEGI_05575 Sequoiadendron giganteum HOM05D004417 ORTHO05D005528 1.8e-18 95.9 78 57.7
SMO364G0727 Selaginella moellendorffii HOM05D004417 ORTHO05D005528 3.1e-18 95.1 79 58.2
arahy.Tifrunner.gnm1.ann1.W0X7A3 Arachis hypogaea HOM05D004417 ORTHO05D005528 4.0e-18 94.7 63 68.3
Mapoly0005s0093 Marchantia polymorpha HOM05D004417 ORTHO05D005528 8.9e-18 93.6 82 53.7
Pp3c27_2940 Physcomitrium patens HOM05D004417 ORTHO05D005528 2.0e-17 92.4 82 53.7
SEGI_38026 Sequoiadendron giganteum HOM05D004417 ORTHO05D005528 5.8e-17 90.9 74 56.8
Haze_10917 Corylus avellana HOM05D004417 ORTHO05D005528 1.0e-13 80.1 51 64.7
CSS0010110 Camellia sinensis var. sinensis HOM05D004417 ORTHO05D005528 3.9e-13 78.2 72 51.4
PSO083G0001 Papaver somniferum HOM05D004417 ORTHO05D005528 6.6e-13 77.4 49 61.2
SGA_v2.0_scaffold50G18460 Striga asiatica HOM05D004417 ORTHO05D005528 9.6e-12 73.6 129 35.7
Haze_10916 Corylus avellana HOM05D004417 ORTHO05D005528 9.3e-07 57.0 35 77.1
Cpa.g.sc2.214 Carica papaya HOM05D004417 ORTHO05D005528 1.2e-06 56.6 35 77.1
Nitab4.5_0008542g0030 Nicotiana tabacum HOM05D004417 ORTHO05D005528 1.6e-06 56.2 35 71.4


User provided reference genes

Program Settings