Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib084G1006 Durio zibethinus HOM05D005829 ORTHO05D007246 4.3e-113 411.4 215 100.0
Duzib068G0473 Durio zibethinus HOM05D005829 ORTHO05D007246 7.2e-92 340.9 216 84.3
Thecc.03G033800 Theobroma cacao HOM05D005829 ORTHO05D007246 1.7e-88 329.7 217 81.6
Gohir.D09G173000 Gossypium hirsutum HOM05D005829 ORTHO05D007246 1.6e-83 313.2 215 78.1
Gohir.A09G177500 Gossypium hirsutum HOM05D005829 ORTHO05D007246 6.1e-83 311.2 215 77.7
Gorai.006G194900 Gossypium raimondii HOM05D005829 ORTHO05D007246 6.1e-83 311.2 215 77.7
Haze_18659 Corylus avellana HOM05D005829 ORTHO05D007246 7.7e-62 241.1 216 64.4
Cfa019789 Carpinus fangiana HOM05D005829 ORTHO05D007246 2.9e-61 239.2 215 63.3
Cpa.g.sc13.3 Carica papaya HOM05D005829 ORTHO05D007246 5.0e-61 238.4 196 66.3
QL10p025073 Quercus lobata HOM05D005829 ORTHO05D007246 5.6e-60 235.0 215 63.3
Ciclev10022208m.g Citrus clementina HOM05D005829 ORTHO05D007246 3.4e-57 225.7 226 57.1
CiPaw.15G129500 Carya illinoinensis HOM05D005829 ORTHO05D007246 4.4e-57 225.3 194 63.4
Manes.01G012500 Manihot esculenta HOM05D005829 ORTHO05D007246 6.4e-56 221.5 203 63.1
PGR083G1885 Punica granatum HOM05D005829 ORTHO05D007246 4.6e-54 215.3 179 65.9
Oeu006380.1 Olea europaea HOM05D005829 ORTHO05D007246 1.3e-53 213.8 203 59.1
TWI15G0782 Tripterygium wilfordii HOM05D005829 ORTHO05D007246 2.3e-53 213.0 218 57.8
Gohir.A08G094610 Gossypium hirsutum HOM05D005829 ORTHO05D007246 3.9e-53 212.2 198 59.1
GSVIVG01008273001 Vitis vinifera HOM05D005829 ORTHO05D007246 6.6e-53 211.5 191 62.8
Dinv36156 Davidia involucrata HOM05D005829 ORTHO05D007246 1.1e-52 210.7 205 60.0
CANSAT21G0600 Cannabis sativa HOM05D005829 ORTHO05D007246 1.9e-52 209.9 198 59.6
Manes.05G145805 Manihot esculenta HOM05D005829 ORTHO05D007246 5.6e-52 208.4 205 59.5
Oeu046995.1 Olea europaea HOM05D005829 ORTHO05D007246 5.6e-52 208.4 202 56.9
Sabra15G0075500 Salix brachista HOM05D005829 ORTHO05D007246 1.8e-50 203.4 210 59.0
Cc04_g07210 Coffea canephora HOM05D005829 ORTHO05D007246 2.3e-50 203.0 201 59.7
ClCG06G014890 Citrullus lanatus HOM05D005829 ORTHO05D007246 3.1e-50 202.6 215 56.3
COL.COLO4_04672 Corchorus olitorius HOM05D005829 ORTHO05D007246 6.8e-50 201.4 159 67.3
Potri.015G053800 Populus trichocarpa HOM05D005829 ORTHO05D007246 6.8e-50 201.4 204 59.8
CSS0021100 Camellia sinensis var. sinensis HOM05D005829 ORTHO05D007246 3.4e-49 199.1 187 61.5
Eucgr.K02215 Eucalyptus grandis HOM05D005829 ORTHO05D007246 3.4e-49 199.1 187 62.0
HanXRQChr10g0314971 Helianthus annuus HOM05D005829 ORTHO05D007246 3.4e-49 199.1 196 59.2
Atru.chr9.821 Acer truncatum HOM05D005829 ORTHO05D007246 3.7e-48 195.7 185 60.0
Nitab4.5_0010801g0020 Nicotiana tabacum HOM05D005829 ORTHO05D007246 4.9e-48 195.3 204 52.9
Lsat_1_v5_gn_8_146520 Lactuca sativa HOM05D005829 ORTHO05D007246 2.4e-47 193.0 193 55.4
Nitab4.5_0011561g0030 Nicotiana tabacum HOM05D005829 ORTHO05D007246 2.4e-47 193.0 204 52.9
MD14G1226000 Malus domestica HOM05D005829 ORTHO05D007246 3.2e-47 192.6 217 52.1
Prupe.5G220500 Prunus persica HOM05D005829 ORTHO05D007246 3.2e-47 192.6 216 52.8
arahy.Tifrunner.gnm1.ann1.K96EGP Arachis hypogaea HOM05D005829 ORTHO05D007246 5.4e-47 191.8 203 56.2
MD06G1215200 Malus domestica HOM05D005829 ORTHO05D007246 1.2e-46 190.7 216 52.3
FAN08G3097 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.6e-46 190.3 216 51.4
MSTRG.11323 Avicennia marina HOM05D005829 ORTHO05D007246 2.7e-46 189.5 208 54.3
PGSC0003DMG400004051 Solanum tuberosum HOM05D005829 ORTHO05D007246 2.7e-46 189.5 197 55.3
MELO3C017300.2 Cucumis melo HOM05D005829 ORTHO05D007246 3.5e-46 189.1 191 59.7
EL10Ac5g11432 Beta vulgaris HOM05D005829 ORTHO05D007246 6.0e-46 188.3 161 62.7
FAN13G0492 Fragaria x ananassa HOM05D005829 ORTHO05D007246 7.8e-46 188.0 216 50.9
FAN18G3094 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.0e-45 187.6 216 50.9
Lalb_Chr14g0371231 Lupinus albus HOM05D005829 ORTHO05D007246 1.0e-45 187.6 195 57.9
FAN04G2288 Fragaria x ananassa HOM05D005829 ORTHO05D007246 2.3e-45 186.4 216 50.9
Solyc06g069170.4 Solanum lycopersicum HOM05D005829 ORTHO05D007246 3.0e-45 186.0 197 53.8
CsaV3_1G003750 Cucumis sativus L. HOM05D005829 ORTHO05D007246 8.6e-45 184.5 177 60.5
Sopen06g026440 Solanum pennellii HOM05D005829 ORTHO05D007246 1.1e-44 184.1 197 53.8
Hund02393 Selenicereus undatus HOM05D005829 ORTHO05D007246 1.5e-44 183.7 197 55.3
Sc12g0006790 Simmondsia chinensis HOM05D005829 ORTHO05D007246 2.5e-44 183.0 222 50.0
ECA234G2972 Erigeron canadensis HOM05D005829 ORTHO05D007246 5.6e-44 181.8 201 53.2
FvH4_5g12290 Fragaria vesca HOM05D005829 ORTHO05D007246 5.6e-44 181.8 215 52.6
FAN18G2130 Fragaria x ananassa HOM05D005829 ORTHO05D007246 5.6e-44 181.8 215 52.6
RcHm_v2.0_Chr7g0185261 Rosa chinensis HOM05D005829 ORTHO05D007246 7.3e-44 181.4 216 50.5
AL2G33720 Arabidopsis lyrata HOM05D005829 ORTHO05D007246 4.7e-43 178.7 205 53.7
Aa31LG4G4200 Aethionema arabicum HOM05D005829 ORTHO05D007246 6.2e-43 178.3 209 54.5
Sp5g29090 Schrenkiella parvula HOM05D005829 ORTHO05D007246 8.1e-43 177.9 205 54.1
CARHR067000 Cardamine hirsuta HOM05D005829 ORTHO05D007246 1.1e-42 177.6 205 55.1
Carub.0002s2066 Capsella rubella HOM05D005829 ORTHO05D007246 1.8e-42 176.8 208 52.9
TAR629G3023 Trochodendron aralioides HOM05D005829 ORTHO05D007246 1.8e-42 176.8 161 60.9
arahy.Tifrunner.gnm1.ann1.SID7TX Arachis hypogaea HOM05D005829 ORTHO05D007246 3.1e-42 176.0 233 49.4
THA.LOC104813901 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 3.1e-42 176.0 201 54.2
CAN.G423.7 Capsicum annuum HOM05D005829 ORTHO05D007246 5.2e-42 175.3 199 50.8
Migut.I00369 Erythranthe guttata HOM05D005829 ORTHO05D007246 5.2e-42 175.3 208 51.9
Peaxi162Scf00013g00945 Petunia axillaris HOM05D005829 ORTHO05D007246 5.2e-42 175.3 202 49.5
Aqoxy3G00323 Aquilegia oxysepala HOM05D005829 ORTHO05D007246 8.9e-42 174.5 163 60.1
BcaB03g15734 Brassica carinata HOM05D005829 ORTHO05D007246 8.9e-42 174.5 205 53.2
Sed0000228 Sechium edule HOM05D005829 ORTHO05D007246 8.9e-42 174.5 164 59.8
Actinidia06971 Actinidia chinensis HOM05D005829 ORTHO05D007246 1.7e-40 170.2 199 52.8
DCAR_023199 Daucus carota HOM05D005829 ORTHO05D007246 3.7e-40 169.1 197 51.8
Potri.015G054100 Populus trichocarpa HOM05D005829 ORTHO05D007246 4.9e-40 168.7 186 55.4
PSO017G1947 Papaver somniferum HOM05D005829 ORTHO05D007246 6.4e-40 168.3 198 51.0
Ah.11g045030 Amaranthus hybridus HOM05D005829 ORTHO05D007246 1.1e-39 167.5 197 50.3
BcaC03g15467 Brassica carinata HOM05D005829 ORTHO05D007246 1.1e-39 167.5 171 59.6
BcaC08g45615 Brassica carinata HOM05D005829 ORTHO05D007246 1.1e-39 167.5 183 56.8
C02p31470 Brassica napus HOM05D005829 ORTHO05D007246 1.1e-39 167.5 171 59.6
BolC2t09178H Brassica oleracea HOM05D005829 ORTHO05D007246 1.1e-39 167.5 171 59.6
PSO478G3740 Papaver somniferum HOM05D005829 ORTHO05D007246 3.2e-39 166.0 201 50.2
BraA02t06935Z Brassica rapa HOM05D005829 ORTHO05D007246 2.1e-38 163.3 171 58.5
A02p18930 Brassica napus HOM05D005829 ORTHO05D007246 7.8e-38 161.4 180 56.1
Thhalv10019131m.g Eutrema salsugineum HOM05D005829 ORTHO05D007246 1.3e-37 160.6 206 49.0
BcaB05g24816 Brassica carinata HOM05D005829 ORTHO05D007246 8.6e-37 157.9 173 54.9
BcaB05g24818 Brassica carinata HOM05D005829 ORTHO05D007246 8.6e-37 157.9 173 54.9
vmacro04041 Vaccinium macrocarpon HOM05D005829 ORTHO05D007246 1.5e-36 157.1 229 44.5
ATR0665G268 Amborella trichopoda HOM05D005829 ORTHO05D007246 3.3e-36 156.0 166 54.8
HPP92_013263 Vanilla planifolia HOM05D005829 ORTHO05D007246 7.3e-36 154.8 168 54.2
HPP92_013214 Vanilla planifolia HOM05D005829 ORTHO05D007246 1.2e-35 154.1 168 54.2
C06p33760 Brassica napus HOM05D005829 ORTHO05D007246 1.6e-35 153.7 183 53.0
BolC6t38490H Brassica oleracea HOM05D005829 ORTHO05D007246 1.6e-35 153.7 183 53.0
CDE05G0659 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 2.1e-35 153.3 196 48.5
SGA_v2.0_scaffold25G10988 Striga asiatica HOM05D005829 ORTHO05D007246 2.1e-35 153.3 224 46.0
unitig_749.g13417 Utricularia gibba HOM05D005829 ORTHO05D007246 3.6e-35 152.5 109 67.0
CDE11G0392 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 1.1e-34 151.0 170 51.2
A07p29590 Brassica napus HOM05D005829 ORTHO05D007246 1.8e-34 150.2 179 53.1
Lj2g0004175 Lotus japonicus HOM05D005829 ORTHO05D007246 2.3e-34 149.8 201 46.8
BraA07t30600Z Brassica rapa HOM05D005829 ORTHO05D007246 5.2e-34 148.7 169 52.7
Os03g0710600 Oryza sativa ssp. japonica HOM05D005829 ORTHO05D007246 2.6e-33 146.4 95 71.6
Rhsim13G0208500 Rhododendron simsii HOM05D005829 ORTHO05D007246 3.4e-33 146.0 223 43.0
Nn1g06955 Nelumbo nucifera HOM05D005829 ORTHO05D007246 1.3e-32 144.1 150 55.3
BcaC03g15466 Brassica carinata HOM05D005829 ORTHO05D007246 3.8e-32 142.5 166 53.6
Zm00001eb054790 Zea mays HOM05D005829 ORTHO05D007246 1.1e-31 141.0 178 51.1
Zm00001eb216440 Zea mays HOM05D005829 ORTHO05D007246 1.2e-30 137.5 178 50.0
BcaC09g48855 Brassica carinata HOM05D005829 ORTHO05D007246 2.1e-30 136.7 129 59.7
C01p45190 Brassica napus HOM05D005829 ORTHO05D007246 2.1e-30 136.7 129 59.7
BolC1t04492H Brassica oleracea HOM05D005829 ORTHO05D007246 2.1e-30 136.7 129 59.7
SEGI_06072 Sequoiadendron giganteum HOM05D005829 ORTHO05D007246 1.7e-29 133.7 180 44.4
AT1G73885 Arabidopsis thaliana HOM05D005829 ORTHO05D007246 1.1e-28 131.0 195 42.6
Ca_25501_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 1.5e-28 130.6 168 50.0
Ca_00264_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 2.0e-25 120.2 161 48.4
TPR.G35237 Trifolium pratense HOM05D005829 ORTHO05D007246 2.9e-24 116.3 86 62.8
AagrBONN_evm.TU.Sc2ySwM_228.1174 Anthoceros agrestis HOM05D005829 ORTHO05D007246 7.1e-23 111.7 94 56.4
AagrBONN_evm.TU.Sc2ySwM_228.2224 Anthoceros agrestis HOM05D005829 ORTHO05D007246 7.1e-23 111.7 94 56.4
Medtr6g084620 Medicago truncatula HOM05D005829 ORTHO05D007246 6.0e-22 108.6 183 43.7
FAN14G0369 Fragaria x ananassa HOM05D005829 ORTHO05D007246 2.8e-19 99.8 67 68.7
Mapoly0028s0124 Marchantia polymorpha HOM05D005829 ORTHO05D007246 2.4e-18 96.7 117 40.2
AUR62029856 Chenopodium quinoa HOM05D005829 ORTHO05D007246 1.2e-17 94.4 186 40.3
Nn3g17806 Nelumbo nucifera HOM05D005829 ORTHO05D007246 1.2e-17 94.4 111 49.5
AUR62025855 Chenopodium quinoa HOM05D005829 ORTHO05D007246 1.5e-17 94.0 188 39.9
Pp3c4_12650 Physcomitrium patens HOM05D005829 ORTHO05D007246 3.8e-16 89.4 100 46.0
Pp3c4_12780 Physcomitrium patens HOM05D005829 ORTHO05D007246 3.8e-16 89.4 100 46.0
THA.LOC104813291 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 1.1e-15 87.8 69 72.5
SMO241G0040 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 2.8e-11 73.2 68 51.5
SMO232G0029 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 8.1e-11 71.6 62 51.6
Actinidia24460 Actinidia chinensis HOM05D005829 ORTHO05D007246 1.5e-09 67.4 41 68.3
Glyma.09G185300 Glycine max HOM05D005829 ORTHO05D007246 1.3e-08 64.3 112 36.6
Glyma.07G090700 Glycine max HOM05D005829 ORTHO05D007246 6.4e-08 62.0 105 36.2
VMungo0464G0155 Vigna mungo HOM05D006108 ORTHO05D007605 1.1e-07 61.2 208 28.8
Phvul.004G158500 Phaseolus vulgaris HOM05D005829 ORTHO05D007246 1.4e-07 60.8 224 27.2
CBR_g29305 Chara braunii HOM05D005829 ORTHO05D007246 3.2e-07 59.7 41 63.4
FAN22G1271 Fragaria x ananassa HOM05D038641 ORTHO05D035590 3.2e-07 59.7 65 53.8


User provided reference genes

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