Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib084G0908 Durio zibethinus HOM05D006624 ORTHO05D008209 5.4e-80 300.8 142 100.0
Duzib068G0530 Durio zibethinus HOM05D006624 ORTHO05D008209 1.1e-53 213.4 129 77.5
Thecc.03G233800 Theobroma cacao HOM05D006624 ORTHO05D008209 1.1e-53 213.4 129 76.7
COL.COLO4_17108 Corchorus olitorius HOM05D000087 ORTHO05D008209 2.0e-50 202.6 129 73.6
Gohir.D03G169701 Gossypium hirsutum HOM05D006624 ORTHO05D008209 7.2e-48 194.1 129 67.4
Gorai.003G180000 Gossypium raimondii HOM05D006624 ORTHO05D008209 7.2e-48 194.1 129 67.4
Gorai.004G193000 Gossypium raimondii HOM05D006624 ORTHO05D008209 2.3e-46 189.1 119 69.7
Gohir.A03G002600 Gossypium hirsutum HOM05D006624 ORTHO05D008209 2.8e-44 182.2 141 61.0
Gorai.013G102100 Gossypium raimondii HOM05D006624 ORTHO05D008209 1.3e-41 173.3 131 62.6
CiPaw.11G087800 Carya illinoinensis HOM05D006624 ORTHO05D008209 2.2e-41 172.6 126 59.5
QL12p007029 Quercus lobata HOM05D006624 ORTHO05D008209 1.4e-40 169.9 127 59.1
TWI15G0738 Tripterygium wilfordii HOM05D006624 ORTHO05D008209 4.2e-40 168.3 126 58.7
QL12p007008 Quercus lobata HOM05D006624 ORTHO05D008209 7.2e-40 167.5 127 57.5
Gorai.001G276000 Gossypium raimondii HOM05D006624 ORTHO05D008209 9.4e-40 167.2 131 59.5
Prupe.5G046100 Prunus persica HOM05D006624 ORTHO05D008209 1.4e-38 163.3 126 58.7
Haze_08295 Corylus avellana HOM05D006624 ORTHO05D008209 2.3e-38 162.5 130 57.7
Sabra01G0115200 Salix brachista HOM05D006624 ORTHO05D008209 3.0e-38 162.2 124 59.7
Ciclev10031769m.g Citrus clementina HOM05D006624 ORTHO05D008209 5.2e-38 161.4 127 55.1
RcHm_v2.0_Chr7g0208351 Rosa chinensis HOM05D006624 ORTHO05D008209 6.7e-38 161.0 129 55.0
Dinv25186 Davidia involucrata HOM05D006624 ORTHO05D008209 1.1e-37 160.2 129 54.3
FvH4_5g21210 Fragaria vesca HOM05D006624 ORTHO05D008209 2.0e-37 159.5 129 52.7
MD06G1040000 Malus domestica HOM05D006624 ORTHO05D008209 3.3e-37 158.7 126 54.8
vmacro14109 Vaccinium macrocarpon HOM05D006624 ORTHO05D008209 9.7e-37 157.1 126 55.6
PGR042G3682 Punica granatum HOM05D006624 ORTHO05D008209 8.2e-36 154.1 117 56.4
Potri.001G146500 Populus trichocarpa HOM05D006624 ORTHO05D008209 1.1e-35 153.7 124 59.7
TAR629G2579 Trochodendron aralioides HOM05D006624 ORTHO05D008209 1.1e-35 153.7 125 54.4
Manes.17G019300 Manihot esculenta HOM05D006624 ORTHO05D008209 1.4e-35 153.3 121 55.4
Rhsim07G0122500 Rhododendron simsii HOM05D006624 ORTHO05D008209 3.1e-35 152.1 126 51.6
FAN18G2886 Fragaria x ananassa HOM05D006624 ORTHO05D008209 5.3e-35 151.4 113 55.8
FAN04G0639 Fragaria x ananassa HOM05D006624 ORTHO05D008209 1.6e-34 149.8 129 50.4
Eucgr.E00310 Eucalyptus grandis HOM05D006624 ORTHO05D008209 2.0e-34 149.4 116 55.2
FAN08G0242 Fragaria x ananassa HOM05D006624 ORTHO05D008209 2.0e-34 149.4 113 54.9
CSS0000809 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 2.6e-34 149.1 132 54.5
CSS0049781 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 1.3e-33 146.7 132 53.8
GSVIVG01013232001 Vitis vinifera HOM05D006624 ORTHO05D008209 1.3e-33 146.7 126 51.6
CsaV3_3G049520 Cucumis sativus L. HOM05D006624 ORTHO05D008209 1.7e-33 146.4 125 55.2
MELO3C003374.2 Cucumis melo HOM05D006624 ORTHO05D008209 2.2e-33 146.0 125 54.4
ClCG09G012360 Citrullus lanatus HOM05D006624 ORTHO05D008209 1.9e-32 142.9 125 53.6
Actinidia10881 Actinidia chinensis HOM05D006624 ORTHO05D008209 1.6e-31 139.8 126 51.6
QL12p007057 Quercus lobata HOM05D006624 ORTHO05D008209 1.6e-31 139.8 106 58.5
Gorai.001G079600 Gossypium raimondii HOM05D006624 ORTHO05D008209 3.6e-31 138.7 85 68.2
Glyma.11G041200 Glycine max HOM05D006624 ORTHO05D008209 6.1e-31 137.9 121 53.7
Gorai.004G213700 Gossypium raimondii HOM05D006624 ORTHO05D008209 8.0e-31 137.5 88 64.8
Lalb_Chr16g0379211 Lupinus albus HOM05D006624 ORTHO05D008209 1.0e-30 137.1 129 48.1
Aqoxy7G00644 Aquilegia oxysepala HOM05D006624 ORTHO05D008209 1.8e-30 136.3 123 48.8
Actinidia31470 Actinidia chinensis HOM05D006624 ORTHO05D008209 5.2e-30 134.8 126 48.4
THA.LOC104827742 Tarenaya hassleriana HOM05D006624 ORTHO05D008209 6.7e-30 134.4 126 51.6
Cc08_g02070 Coffea canephora HOM05D006624 ORTHO05D008209 8.8e-30 134.0 129 49.6
Glyma.01G200900 Glycine max HOM05D006624 ORTHO05D008209 8.8e-30 134.0 130 49.2
Cpa.g.sc6.412 Carica papaya HOM05D006624 ORTHO05D008209 1.5e-29 133.3 110 54.5
Lj2g0021367 Lotus japonicus HOM05D006624 ORTHO05D008209 2.0e-29 132.9 129 46.5
Sed0020690 Sechium edule HOM05D006624 ORTHO05D008209 5.7e-29 131.3 119 48.7
Lj2A246G27 Lonicera japonica HOM05D006624 ORTHO05D008209 7.5e-29 131.0 108 51.9
Medtr5g014010 Medicago truncatula HOM05D006624 ORTHO05D008209 2.8e-28 129.0 129 43.4
Psat2g174640 Pisum sativum HOM05D006624 ORTHO05D008209 2.8e-28 129.0 129 45.7
DCAR_031785 Daucus carota HOM05D006624 ORTHO05D008209 3.7e-28 128.6 126 46.0
Solyc08g077250.4 Solanum lycopersicum HOM05D006624 ORTHO05D008209 4.8e-28 128.3 126 46.0
TPR.G21431 Trifolium pratense HOM05D006624 ORTHO05D008209 8.2e-28 127.5 129 43.4
Phvul.002G004700 Phaseolus vulgaris HOM05D006624 ORTHO05D008209 1.1e-27 127.1 130 46.2
PGSC0003DMG400024215 Solanum tuberosum HOM05D006624 ORTHO05D008209 1.4e-27 126.7 126 46.0
AL8G11790 Arabidopsis lyrata HOM05D006624 ORTHO05D008209 4.1e-27 125.2 129 45.7
BcaC06g34373 Brassica carinata HOM05D006624 ORTHO05D008209 5.3e-27 124.8 129 45.0
CAN.G799.14 Capsicum annuum HOM05D006624 ORTHO05D008209 7.0e-27 124.4 126 45.2
AT5G46560 Arabidopsis thaliana HOM05D006624 ORTHO05D008209 9.1e-27 124.0 129 45.0
VMungo1215G2954 Vigna mungo HOM05D006624 ORTHO05D008209 9.1e-27 124.0 130 46.9
arahy.Tifrunner.gnm1.ann1.A7V6P3 Arachis hypogaea HOM05D006624 ORTHO05D008209 1.6e-26 123.2 140 42.1
BcaC06g31468 Brassica carinata HOM05D006624 ORTHO05D008209 1.6e-26 123.2 129 44.2
Sopen08g025830 Solanum pennellii HOM05D006624 ORTHO05D008209 2.7e-26 122.5 126 45.2
Migut.N01377 Erythranthe guttata HOM05D006624 ORTHO05D008209 3.5e-26 122.1 112 47.3
Sc01g0007740 Simmondsia chinensis HOM05D006624 ORTHO05D008209 3.5e-26 122.1 126 45.2
Aa31LG9G6360 Aethionema arabicum HOM05D006624 ORTHO05D008209 4.5e-26 121.7 127 46.5
MBI04_g31972_MAGBIO Magnolia biondii HOM05D006624 ORTHO05D008209 4.5e-26 121.7 110 47.3
Nitab4.5_0004327g0020 Nicotiana tabacum HOM05D006624 ORTHO05D008209 5.9e-26 121.3 126 43.7
arahy.Tifrunner.gnm1.ann1.76B0S0 Arachis hypogaea HOM05D006624 ORTHO05D008209 1.0e-25 120.6 147 40.1
BolC7t43526H Brassica oleracea HOM05D006624 ORTHO05D008209 2.2e-25 119.4 129 42.6
Nitab4.5_0002055g0180 Nicotiana tabacum HOM05D006624 ORTHO05D008209 3.8e-25 118.6 126 41.3
C07p29750 Brassica napus HOM05D006624 ORTHO05D008209 5.0e-25 118.2 129 41.9
CARHR175020 Cardamine hirsuta HOM05D006624 ORTHO05D008209 5.0e-25 118.2 126 44.4
PSO565G0001 Papaver somniferum HOM05D006624 ORTHO05D008209 5.0e-25 118.2 129 43.4
Ah.07g200030 Amaranthus hybridus HOM05D006624 ORTHO05D008209 8.5e-25 117.5 127 44.1
PSO339G2002 Papaver somniferum HOM05D006624 ORTHO05D008209 8.5e-25 117.5 129 42.6
Hund14427 Selenicereus undatus HOM05D006624 ORTHO05D008209 1.5e-24 116.7 126 45.2
MSTRG.12153 Avicennia marina HOM05D006624 ORTHO05D008209 1.9e-24 116.3 124 45.2
Gohir.D08G202450 Gossypium hirsutum HOM05D006624 ORTHO05D008209 3.2e-24 115.5 72 65.3
Thhalv10000965m.g Eutrema salsugineum HOM05D006624 ORTHO05D008209 4.2e-24 115.2 129 44.2
SalBow6G4456 Salvia bowleyana HOM05D006624 ORTHO05D008209 7.2e-24 114.4 126 41.3
SGA_v2.0_scaffold36G14316 Striga asiatica HOM05D006624 ORTHO05D008209 7.2e-24 114.4 119 42.0
Carub.0008s0136 Capsella rubella HOM05D006624 ORTHO05D008209 9.4e-24 114.0 129 41.1
CDE04G3153 Ceratophyllum demersum HOM05D006624 ORTHO05D008209 1.2e-23 113.6 109 49.5
HanXRQChr08g0227961 Helianthus annuus HOM05D006624 ORTHO05D008209 1.6e-23 113.2 117 43.6
EL10Ac5g12192 Beta vulgaris HOM05D006624 ORTHO05D008209 6.1e-23 111.3 125 44.0
BraA06t27456Z Brassica rapa HOM05D006624 ORTHO05D008209 6.1e-23 111.3 129 41.1
ECA233G2124 Erigeron canadensis HOM05D006624 ORTHO05D008209 6.1e-23 111.3 116 44.8
Gohir.D07G137300 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.4e-22 110.2 69 65.2
A06p45890 Brassica napus HOM05D006624 ORTHO05D008209 2.3e-22 109.4 129 40.3
Atru.chr6.1770 Acer truncatum HOM05D006624 ORTHO05D008209 5.2e-22 108.2 127 45.7
AUR62007233 Chenopodium quinoa HOM05D006624 ORTHO05D008209 9.8e-21 104.0 123 43.1
AUR62018767 Chenopodium quinoa HOM05D006624 ORTHO05D008209 2.8e-20 102.4 123 43.1
ATR1101G009 Amborella trichopoda HOM05D006624 ORTHO05D008209 3.1e-19 99.0 125 38.4
Gohir.D11G288800 Gossypium hirsutum HOM05D000724 ORTHO05D011687 5.5e-16 88.2 59 62.7
SEGI_35168 Sequoiadendron giganteum HOM05D006624 ORTHO05D008209 2.1e-15 86.3 113 35.4
Lsat_1_v5_gn_6_68241 Lactuca sativa HOM05D006624 ORTHO05D008209 1.0e-14 84.0 82 41.5
SpUn0632_0010 Schrenkiella parvula HOM05D006624 ORTHO05D008209 5.2e-14 81.6 90 44.4
FAN13G3188 Fragaria x ananassa HOM05D006624 ORTHO05D008209 4.4e-13 78.6 62 54.8
Gorai.007G312600 Gossypium raimondii HOM05D000724 ORTHO05D011687 6.3e-12 74.7 86 39.5
Ca_24634_v3 Cicer arietinum L. HOM05D006624 ORTHO05D008209 1.6e-10 70.1 50 54.0
AagrBONN_evm.TU.Sc2ySwM_362.2673 Anthoceros agrestis HOM05D006624 ORTHO05D008209 7.8e-10 67.8 114 30.7
arahy.Tifrunner.gnm1.ann1.PE2WYP Arachis hypogaea HOM05D006624 ORTHO05D008209 1.0e-09 67.4 80 40.0
Peaxi162Scf00084g00925 Petunia axillaris HOM05D006624 ORTHO05D008209 2.3e-09 66.2 64 43.8
CBR_g18557 Chara braunii HOM05D006624 ORTHO05D008209 5.6e-08 61.6 113 24.8
Hma1.2p1_0414F.1_g147760 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 1.2e-07 60.5 42 66.7
Pp3c26_11390 Physcomitrium patens HOM05D006624 ORTHO05D008209 8.0e-07 57.8 106 25.5


User provided reference genes

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