Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib084G0828 Durio zibethinus HOM05D005411 ORTHO05D006463 8.0e-109 397.1 204 100.0
Duzib205G1808 Durio zibethinus HOM05D005411 ORTHO05D006463 1.3e-45 187.2 117 82.9
Thecc.03G279100 Theobroma cacao HOM05D005411 ORTHO05D006463 2.5e-41 172.9 152 65.1
Gorai.003G158500 Gossypium raimondii HOM05D005411 ORTHO05D006463 1.1e-33 147.5 143 60.1
Gohir.A03G016600 Gossypium hirsutum HOM05D005411 ORTHO05D006463 2.0e-30 136.7 143 58.0
Gohir.D03G151300 Gossypium hirsutum HOM05D005411 ORTHO05D006463 1.9e-25 120.2 128 57.0
FAN04G3034 Fragaria x ananassa HOM05D005411 ORTHO05D006463 1.1e-22 110.9 145 44.8
FAN13G2772 Fragaria x ananassa HOM05D005411 ORTHO05D006463 1.5e-22 110.5 145 44.8
FAN08G0497 Fragaria x ananassa HOM05D005411 ORTHO05D006463 2.0e-22 110.2 145 44.1
Aqoxy7G00317 Aquilegia oxysepala HOM05D005411 ORTHO05D006463 1.1e-20 104.4 100 58.0
SGA_v2.0_scaffold173G39183 Striga asiatica HOM05D005411 ORTHO05D006463 1.4e-20 104.0 124 52.4
TAR374G0701 Trochodendron aralioides HOM05D005411 ORTHO05D006463 2.4e-20 103.2 106 52.8
RcHm_v2.0_Chr7g0197541 Rosa chinensis HOM05D005411 ORTHO05D006463 7.0e-20 101.7 124 46.0
Cfa012226 Carpinus fangiana HOM05D005411 ORTHO05D006463 9.1e-20 101.3 108 55.6
Nitab4.5_0013184g0010 Nicotiana tabacum HOM05D005411 ORTHO05D006463 2.0e-19 100.1 129 47.3
QL12p032900 Quercus lobata HOM05D005411 ORTHO05D006463 2.0e-19 100.1 129 47.3
Aa31LG9G10800 Aethionema arabicum HOM05D005411 ORTHO05D006463 2.6e-19 99.8 129 44.2
FAN18G0348 Fragaria x ananassa HOM05D005411 ORTHO05D006463 2.6e-19 99.8 61 73.8
GSVIVG01019751001 Vitis vinifera HOM05D005411 ORTHO05D006463 2.6e-19 99.8 71 73.2
Nitab4.5_0001615g0100 Nicotiana tabacum HOM05D005411 ORTHO05D006463 4.5e-19 99.0 129 46.5
Solyc08g081130.4 Solanum lycopersicum HOM05D005411 ORTHO05D006463 1.3e-18 97.4 97 55.7
Sopen08g029430 Solanum pennellii HOM05D005411 ORTHO05D006463 1.3e-18 97.4 97 55.7
TWI60G1258 Tripterygium wilfordii HOM05D005411 ORTHO05D006463 1.3e-18 97.4 132 43.9
CAN.G774.50 Capsicum annuum HOM05D005411 ORTHO05D006463 1.7e-18 97.1 121 47.9
CiPaw.11G134900 Carya illinoinensis HOM05D005411 ORTHO05D006463 3.8e-18 95.9 143 42.7
vmacro22820 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 5.0e-18 95.5 84 60.7
FvH4_5g02510 Fragaria vesca HOM05D005411 ORTHO05D006463 6.5e-18 95.1 59 74.6
PSO782G3895 Papaver somniferum HOM05D005411 ORTHO05D006463 6.5e-18 95.1 55 81.8
Eucgr.H02261 Eucalyptus grandis HOM05D005411 ORTHO05D006463 8.5e-18 94.7 133 42.9
PSO478G4730 Papaver somniferum HOM05D005411 ORTHO05D006463 8.5e-18 94.7 55 81.8
CSS0034062 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 1.1e-17 94.4 71 66.2
Ciclev10022634m.g Citrus clementina HOM05D005411 ORTHO05D006463 1.1e-17 94.4 114 51.8
Rhsim07G0090400 Rhododendron simsii HOM05D005411 ORTHO05D006463 1.5e-17 94.0 76 63.2
MELO3C016353.2 Cucumis melo HOM05D005411 ORTHO05D006463 1.9e-17 93.6 120 48.3
Manes.02G019300 Manihot esculenta HOM05D005411 ORTHO05D006463 1.9e-17 93.6 141 41.8
MD06G1084200 Malus domestica HOM05D005411 ORTHO05D006463 2.5e-17 93.2 105 54.3
Prupe.5G100600 Prunus persica HOM05D005411 ORTHO05D006463 2.5e-17 93.2 143 43.4
arahy.Tifrunner.gnm1.ann1.FJ1DNZ Arachis hypogaea HOM05D005411 ORTHO05D006463 3.2e-17 92.8 73 60.3
arahy.Tifrunner.gnm1.ann1.P2DUDW Arachis hypogaea HOM05D005411 ORTHO05D006463 3.2e-17 92.8 73 60.3
AUR62022799 Chenopodium quinoa HOM05D005411 ORTHO05D006463 3.2e-17 92.8 116 46.6
Nn1g01526 Nelumbo nucifera HOM05D005411 ORTHO05D006463 3.2e-17 92.8 71 63.4
Peaxi162Scf00119g00941 Petunia axillaris HOM05D005411 ORTHO05D006463 3.2e-17 92.8 116 47.4
CANSAT78G0141 Cannabis sativa HOM05D005411 ORTHO05D006463 4.2e-17 92.4 144 43.1
ECA233G5385 Erigeron canadensis HOM05D005411 ORTHO05D006463 5.5e-17 92.0 71 66.2
Carub.0007s1784 Capsella rubella HOM05D005411 ORTHO05D006463 7.2e-17 91.7 118 48.3
PGSC0003DMG403012339 Solanum tuberosum HOM05D005411 ORTHO05D006463 7.2e-17 91.7 142 44.4
vmacro11335 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 7.2e-17 91.7 145 42.1
Actinidia02004 Actinidia chinensis HOM05D005411 ORTHO05D006463 9.4e-17 91.3 116 49.1
Eucgr.L02732 Eucalyptus grandis HOM05D005411 ORTHO05D006463 9.4e-17 91.3 128 42.2
vmacro13959 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 9.4e-17 91.3 127 48.0
Cc08_g14780 Coffea canephora HOM05D005411 ORTHO05D006463 1.2e-16 90.9 116 47.4
Potri.001G103800 Populus trichocarpa HOM05D005411 ORTHO05D006463 1.2e-16 90.9 55 74.5
AagrBONN_evm.TU.Sc2ySwM_369.479 Anthoceros agrestis HOM05D005411 ORTHO05D006463 1.6e-16 90.5 66 65.2
Lalb_Chr09g0332851 Lupinus albus HOM05D005411 ORTHO05D006463 1.6e-16 90.5 123 44.7
HanXRQChr13g0394241 Helianthus annuus HOM05D005411 ORTHO05D006463 2.1e-16 90.1 71 66.2
CsaV3_4G005950 Cucumis sativus L. HOM05D005411 ORTHO05D006463 2.7e-16 89.7 55 74.5
Thhalv10026496m.g Eutrema salsugineum HOM05D005411 ORTHO05D006463 2.7e-16 89.7 103 50.5
MBI18_g42863_MAGBIO Magnolia biondii HOM05D005411 ORTHO05D006463 2.7e-16 89.7 71 63.4
Migut.A00759 Erythranthe guttata HOM05D005411 ORTHO05D006463 3.6e-16 89.4 103 51.5
ATR0680G335 Amborella trichopoda HOM05D005411 ORTHO05D006463 4.7e-16 89.0 80 58.8
Lsat_1_v5_gn_6_6580 Lactuca sativa HOM05D005411 ORTHO05D006463 4.7e-16 89.0 71 63.4
THA.LOC104814574 Tarenaya hassleriana HOM05D005411 ORTHO05D006463 4.7e-16 89.0 130 43.8
BcaC03g18356 Brassica carinata HOM05D005411 ORTHO05D006463 6.1e-16 88.6 71 63.4
C02p64340 Brassica napus HOM05D005411 ORTHO05D006463 6.1e-16 88.6 71 63.4
Hma1.2p1_0377F.1_g139300 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 6.1e-16 88.6 71 63.4
Sabra01G0078400 Salix brachista HOM05D005411 ORTHO05D006463 6.1e-16 88.6 59 69.5
Oeu011043.2 Olea europaea HOM05D005411 ORTHO05D006463 1.4e-15 87.4 109 45.9
AL7G30140 Arabidopsis lyrata HOM05D005411 ORTHO05D006463 1.8e-15 87.0 118 47.5
BolC5t34770H Brassica oleracea HOM05D005411 ORTHO05D006463 1.8e-15 87.0 52 73.1
Sed0017646 Sechium edule HOM05D005411 ORTHO05D006463 1.8e-15 87.0 103 48.5
PGR042G1580 Punica granatum HOM05D005411 ORTHO05D006463 2.3e-15 86.7 117 49.6
VMungo0251G3187 Vigna mungo HOM05D005411 ORTHO05D006463 2.3e-15 86.7 76 56.6
AT4G23330 Arabidopsis thaliana HOM05D005411 ORTHO05D006463 4.0e-15 85.9 117 47.0
A03p54210 Brassica napus HOM05D005411 ORTHO05D006463 4.0e-15 85.9 88 55.7
CARHR230670 Cardamine hirsuta HOM05D005411 ORTHO05D006463 4.0e-15 85.9 118 46.6
BraA03t14482Z Brassica rapa HOM05D000022 ORTHO05D000071 5.2e-15 85.5 88 54.5
Actinidia14564 Actinidia chinensis HOM05D005411 ORTHO05D006463 8.8e-15 84.7 116 46.6
A01p14570 Brassica napus HOM05D005411 ORTHO05D006463 8.8e-15 84.7 116 48.3
BraA01t01399Z Brassica rapa HOM05D005411 ORTHO05D006463 8.8e-15 84.7 116 48.3
Glyma.05G208200 Glycine max HOM05D005411 ORTHO05D006463 8.8e-15 84.7 71 59.2
Dinv38942 Davidia involucrata HOM05D005411 ORTHO05D006463 1.2e-14 84.3 115 48.7
BcaC09g51012 Brassica carinata HOM05D005411 ORTHO05D006463 2.0e-14 83.6 117 46.2
BolC1t01733H Brassica oleracea HOM05D005411 ORTHO05D006463 2.0e-14 83.6 117 46.2
Phvul.002G289800 Phaseolus vulgaris HOM05D005411 ORTHO05D006463 2.0e-14 83.6 71 57.7
Dinv38939 Davidia involucrata HOM05D005411 ORTHO05D006463 2.6e-14 83.2 116 48.3
Psat7g033000 Pisum sativum HOM05D005411 ORTHO05D006463 2.6e-14 83.2 100 46.0
MSTRG.25610 Avicennia marina HOM05D005411 ORTHO05D006463 3.3e-14 82.8 71 57.7
BcaC01g04135 Brassica carinata HOM05D005411 ORTHO05D006463 7.5e-14 81.6 59 62.7
BcaNung03266 Brassica carinata HOM05D005411 ORTHO05D006463 7.5e-14 81.6 109 46.8
ClCG07G008090 Citrullus lanatus HOM05D005411 ORTHO05D006463 7.5e-14 81.6 126 43.7
Hund16039 Selenicereus undatus HOM05D005411 ORTHO05D006463 7.5e-14 81.6 116 43.1
Lj8E221T1 Lonicera japonica HOM05D005411 ORTHO05D006463 9.7e-14 81.3 55 65.5
Medtr8g098255 Medicago truncatula HOM05D005411 ORTHO05D006463 1.3e-13 80.9 59 61.0
SEGI_09083 Sequoiadendron giganteum HOM05D005411 ORTHO05D006463 1.3e-13 80.9 92 48.9
TPR.G12871 Trifolium pratense HOM05D005411 ORTHO05D006463 1.3e-13 80.9 59 61.0
BcaNung01456 Brassica carinata HOM05D005411 ORTHO05D006463 1.7e-13 80.5 115 44.3
C07p52580 Brassica napus HOM05D000022 ORTHO05D000071 1.7e-13 80.5 115 44.3
BolC7t45755H Brassica oleracea HOM05D005411 ORTHO05D006463 1.7e-13 80.5 115 44.3
MD14G1105400 Malus domestica HOM05D005411 ORTHO05D006463 2.8e-13 79.7 105 47.6
SalBow4G3209 Salvia bowleyana HOM05D005411 ORTHO05D006463 3.7e-13 79.3 112 46.4
Ca_17530_v3 Cicer arietinum L. HOM05D005411 ORTHO05D006463 6.3e-13 78.6 53 62.3
CDE11G0686 Ceratophyllum demersum HOM05D003133 ORTHO05D006463 1.4e-12 77.4 132 43.2
BcaNung00977 Brassica carinata HOM05D005411 ORTHO05D006463 1.8e-12 77.0 46 71.7
Zm00001eb104990 Zea mays HOM05D005411 ORTHO05D006463 2.4e-12 76.6 72 50.0
unitig_46.g18551 Utricularia gibba HOM05D005411 ORTHO05D006463 3.1e-12 76.3 55 60.0
Pp3c11_2200 Physcomitrium patens HOM05D005411 ORTHO05D006463 4.1e-12 75.9 55 58.2
Os07g0483400 Oryza sativa ssp. japonica HOM05D005411 ORTHO05D006463 5.3e-12 75.5 71 50.7
CiPaw.12G092800 Carya illinoinensis HOM05D005411 ORTHO05D006463 7.0e-12 75.1 136 39.0
AUR62012163 Chenopodium quinoa HOM05D005411 ORTHO05D006463 2.7e-11 73.2 155 34.8
Lj4g0004308 Lotus japonicus HOM05D005411 ORTHO05D006463 2.7e-11 73.2 108 38.0
HPP92_001497 Vanilla planifolia HOM05D005411 ORTHO05D006463 5.9e-11 72.0 48 64.6
Mapoly0008s0209 Marchantia polymorpha HOM05D005411 ORTHO05D006463 1.3e-10 70.9 60 51.7
CDE09G0994 Ceratophyllum demersum HOM05D005411 ORTHO05D006463 4.2e-09 65.9 56 58.9
BcaNung00981 Brassica carinata HOM05D005411 ORTHO05D006463 4.7e-08 62.4 81 46.9
C01p18020 Brassica napus HOM05D005411 ORTHO05D006463 6.1e-08 62.0 102 43.1
EL10Ac2g04672 Beta vulgaris HOM05D005411 ORTHO05D006463 1.8e-07 60.5 106 34.9
Sc01g0009600 Simmondsia chinensis HOM05D005411 ORTHO05D006463 1.8e-07 60.5 103 40.8
BcaC08g44430 Brassica carinata HOM05D000522 ORTHO05D021960 1.2e-06 57.8 46 60.9
C06p18650 Brassica napus HOM05D000282 ORTHO05D021960 1.2e-06 57.8 46 60.9
C03p44770 Brassica napus HOM05D005411 ORTHO05D006463 2.6e-06 56.6 31 77.4
BolC3t16740H Brassica oleracea HOM05D005411 ORTHO05D006463 2.6e-06 56.6 31 77.4
C07p11360 Brassica napus HOM05D001537 ORTHO05D021960 9.8e-06 54.7 100 40.0


User provided reference genes

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