Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib084G0400 Durio zibethinus HOM05D007441 ORTHO05D009501 4.4e-104 381.3 197 100.0
Duzib205G0170 Durio zibethinus HOM05D007441 ORTHO05D009501 7.6e-72 274.2 184 80.4
Thecc.03G008500 Theobroma cacao HOM05D007441 ORTHO05D009501 1.3e-68 263.5 178 79.2
Hma1.2p1_0176F.1_g077710 Hydrangea macrophylla HOM05D007441 ORTHO05D009501 5.8e-56 221.5 183 63.9
QL10p013655 Quercus lobata HOM05D007441 ORTHO05D009501 2.9e-55 219.2 177 65.0
GSVIVG01007790001 Vitis vinifera HOM05D007441 ORTHO05D009501 4.9e-55 218.4 169 66.3
Sc04g0001930 Simmondsia chinensis HOM05D007441 ORTHO05D009501 7.1e-54 214.5 179 62.0
FvH4_5g05090 Fragaria vesca HOM05D007441 ORTHO05D009501 9.3e-54 214.2 177 63.3
FAN18G4363 Fragaria x ananassa HOM05D007441 ORTHO05D009501 4.6e-53 211.8 177 62.7
Glyma.17G091300 Glycine max HOM05D007441 ORTHO05D009501 4.6e-53 211.8 177 62.1
FAN04G2715 Fragaria x ananassa HOM05D007441 ORTHO05D009501 1.0e-52 210.7 177 62.1
THA.LOC104809273 Tarenaya hassleriana HOM05D007441 ORTHO05D009501 2.3e-52 209.5 174 63.2
CSS0037538 Camellia sinensis var. sinensis HOM05D007441 ORTHO05D009501 3.9e-52 208.8 179 62.0
Prupe.5G176500 Prunus persica HOM05D007441 ORTHO05D009501 5.1e-52 208.4 179 61.5
CiPaw.11G029400 Carya illinoinensis HOM05D007441 ORTHO05D009501 6.7e-52 208.0 175 64.6
Lj9A451T94 Lonicera japonica HOM05D007441 ORTHO05D009501 6.7e-52 208.0 175 61.1
FAN13G3077 Fragaria x ananassa HOM05D007441 ORTHO05D009501 1.5e-51 206.8 177 61.0
RcHm_v2.0_Chr7g0193911 Rosa chinensis HOM05D007441 ORTHO05D009501 1.5e-51 206.8 178 60.7
Ciclev10022460m.g Citrus clementina HOM05D007441 ORTHO05D009501 7.4e-51 204.5 181 60.2
arahy.Tifrunner.gnm1.ann1.DR4P4T Arachis hypogaea HOM05D007441 ORTHO05D009501 1.3e-50 203.8 175 61.7
VMungo1215G1307 Vigna mungo HOM05D007441 ORTHO05D009501 1.3e-50 203.8 178 61.2
MD14G1183800 Malus domestica HOM05D007441 ORTHO05D009501 2.1e-50 203.0 159 64.8
TWI15G0162 Tripterygium wilfordii HOM05D007441 ORTHO05D009501 2.1e-50 203.0 179 63.7
arahy.Tifrunner.gnm1.ann1.01HJP6 Arachis hypogaea HOM05D007441 ORTHO05D009501 2.8e-50 202.6 175 61.1
Actinidia19093 Actinidia chinensis HOM05D007441 ORTHO05D009501 3.7e-50 202.2 182 59.9
Lj4g0018861 Lotus japonicus HOM05D007441 ORTHO05D009501 6.2e-50 201.4 139 71.2
TAR622G1175 Trochodendron aralioides HOM05D007441 ORTHO05D009501 6.2e-50 201.4 181 61.3
Phvul.003G198700 Phaseolus vulgaris HOM05D007441 ORTHO05D009501 1.5e-48 196.8 169 60.9
Dinv20676 Davidia involucrata HOM05D007441 ORTHO05D009501 3.4e-48 195.7 181 59.1
PGR044G0794 Punica granatum HOM05D007441 ORTHO05D009501 3.4e-48 195.7 181 58.6
Manes.06G102900 Manihot esculenta HOM05D007441 ORTHO05D009501 7.6e-48 194.5 186 59.1
Atru.chr9.2436 Acer truncatum HOM05D007441 ORTHO05D009501 1.0e-47 194.1 176 60.2
Cpa.g.sc124.33 Carica papaya HOM05D007441 ORTHO05D009501 2.9e-47 192.6 178 58.4
AT1G24450 Arabidopsis thaliana HOM05D007441 ORTHO05D009501 1.4e-46 190.3 176 58.0
BolC5t31303H Brassica oleracea HOM05D007441 ORTHO05D009501 1.4e-46 190.3 179 55.3
Lalb_Chr07g0182651 Lupinus albus HOM05D007441 ORTHO05D009501 1.9e-46 189.9 144 67.4
BcaC05g26717 Brassica carinata HOM05D007441 ORTHO05D009501 2.5e-46 189.5 179 56.4
C05p25830 Brassica napus HOM05D007441 ORTHO05D009501 2.5e-46 189.5 179 55.3
Ca_21923_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 2.5e-46 189.5 158 60.1
Lsat_1_v5_gn_1_26521 Lactuca sativa HOM05D007441 ORTHO05D009501 2.5e-46 189.5 168 58.9
Potri.012G078400 Populus trichocarpa HOM05D007441 ORTHO05D009501 3.2e-46 189.1 176 55.7
A09p38770 Brassica napus HOM05D007441 ORTHO05D009501 4.2e-46 188.7 145 66.2
BraA09t39385Z Brassica rapa HOM05D007441 ORTHO05D009501 4.2e-46 188.7 145 66.2
SGA_v2.0_scaffold90G27976 Striga asiatica HOM05D007441 ORTHO05D009501 4.2e-46 188.7 181 57.5
Ca_21905_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 7.1e-46 188.0 169 59.2
Carub.0001s2566 Capsella rubella HOM05D007441 ORTHO05D009501 9.3e-46 187.6 175 56.0
Sp1g23350 Schrenkiella parvula HOM05D007441 ORTHO05D009501 9.3e-46 187.6 172 57.0
Aa31LG7G9580 Aethionema arabicum HOM05D007441 ORTHO05D009501 2.1e-45 186.4 169 59.8
AL1G40490 Arabidopsis lyrata HOM05D007441 ORTHO05D009501 2.7e-45 186.0 177 56.5
AUR62008240 Chenopodium quinoa HOM05D007441 ORTHO05D009501 2.7e-45 186.0 140 65.0
Medtr4g106640 Medicago truncatula HOM05D007441 ORTHO05D009501 2.7e-45 186.0 143 65.0
Thhalv10008862m.g Eutrema salsugineum HOM05D007441 ORTHO05D009501 3.5e-45 185.7 179 54.7
ECA247G2439 Erigeron canadensis HOM05D007441 ORTHO05D009501 4.6e-45 185.3 139 64.7
CANSAT80G2614 Cannabis sativa HOM05D007441 ORTHO05D009501 7.9e-45 184.5 145 65.5
Oeu016356.1 Olea europaea HOM05D007441 ORTHO05D009501 7.9e-45 184.5 172 55.8
Psat4g057000 Pisum sativum HOM05D007441 ORTHO05D009501 1.8e-44 183.3 143 62.2
AUR62030992 Chenopodium quinoa HOM05D007441 ORTHO05D009501 3.0e-44 182.6 173 54.9
Rhsim12G0163200 Rhododendron simsii HOM05D007441 ORTHO05D009501 5.1e-44 181.8 143 62.2
SalBow5G3166 Salvia bowleyana HOM05D007441 ORTHO05D009501 8.7e-44 181.0 181 55.8
CARHR026680 Cardamine hirsuta HOM05D007441 ORTHO05D009501 1.5e-43 180.3 174 56.9
Haze_07488 Corylus avellana HOM05D007441 ORTHO05D009501 1.9e-43 179.9 170 56.5
Sabra12G0056200 Salix brachista HOM05D007441 ORTHO05D009501 2.5e-43 179.5 143 60.8
MSTRG.23109 Avicennia marina HOM05D007441 ORTHO05D009501 7.4e-43 177.9 173 53.8
Nn4g22840 Nelumbo nucifera HOM05D007441 ORTHO05D009501 1.3e-42 177.2 177 52.5
Hund02733 Selenicereus undatus HOM05D007441 ORTHO05D009501 1.3e-42 177.2 170 55.3
PGSC0003DMG400024487 Solanum tuberosum HOM05D007441 ORTHO05D009501 8.2e-42 174.5 182 53.8
HanXRQChr02g0037211 Helianthus annuus HOM05D007441 ORTHO05D009501 1.8e-41 173.3 173 53.8
Aqoxy3G03040 Aquilegia oxysepala HOM05D007441 ORTHO05D009501 2.4e-41 172.9 140 62.9
Nitab4.5_0006831g0010 Nicotiana tabacum HOM05D007441 ORTHO05D009501 3.1e-41 172.6 177 58.2
Solyc03g114120.3 Solanum lycopersicum HOM05D007441 ORTHO05D009501 4.0e-41 172.2 177 54.8
Potri.015G073900 Populus trichocarpa HOM05D007441 ORTHO05D009501 5.3e-41 171.8 172 55.8
BcaC05g26720 Brassica carinata HOM05D007441 ORTHO05D009501 1.5e-40 170.2 179 52.0
TPR.G37479 Trifolium pratense HOM05D007441 ORTHO05D009501 1.5e-40 170.2 171 55.0
Sopen03g033180 Solanum pennellii HOM05D007441 ORTHO05D009501 2.0e-40 169.9 177 54.2
Nitab4.5_0010542g0040 Nicotiana tabacum HOM05D007441 ORTHO05D001268 1.3e-39 167.2 165 57.0
PSO832G4588 Papaver somniferum HOM05D007441 ORTHO05D009501 1.3e-39 167.2 178 49.4
EL10Ac5g10787 Beta vulgaris HOM05D007441 ORTHO05D009501 3.8e-39 165.6 129 62.8
BcaC05g26525 Brassica carinata HOM05D007441 ORTHO05D009501 6.1e-37 158.3 115 64.3
CAN.G4872.1 Capsicum annuum HOM05D007441 ORTHO05D009501 2.3e-36 156.4 162 57.4
DCAR_031307 Daucus carota HOM05D007441 ORTHO05D009501 1.5e-35 153.7 114 64.0
AUR62029952 Chenopodium quinoa HOM05D007441 ORTHO05D009501 1.3e-34 150.6 125 58.4
BcaC06g35265 Brassica carinata HOM05D007441 ORTHO05D009501 3.7e-34 149.1 110 67.3
C07p18070 Brassica napus HOM05D007441 ORTHO05D009501 1.8e-33 146.7 110 66.4
CAN.G781.35 Capsicum annuum HOM05D007441 ORTHO05D009501 1.5e-32 143.7 125 59.2
Dinv09163 Davidia involucrata HOM05D007441 ORTHO05D009501 1.6e-29 133.7 127 59.8
MBI15_g31106_MAGBIO Magnolia biondii HOM05D007441 ORTHO05D009501 3.0e-28 129.4 111 56.8
ATR1149G031 Amborella trichopoda HOM05D007441 ORTHO05D009501 6.7e-28 128.3 181 43.6
Zm00001eb210540 Zea mays HOM05D007441 ORTHO05D009501 6.7e-28 128.3 153 42.5
Peaxi162Scf00017g00269 Petunia axillaris HOM05D007441 ORTHO05D009501 1.5e-27 127.1 113 58.4
BolC7t42316H Brassica oleracea HOM05D007441 ORTHO05D009501 5.7e-27 125.2 105 59.0
Actinidia34944 Actinidia chinensis HOM05D007441 ORTHO05D009501 1.2e-24 117.5 81 65.4
COL.COLO4_16923 Corchorus olitorius HOM05D007441 ORTHO05D009501 3.4e-24 115.9 94 62.8
AUR62039786 Chenopodium quinoa HOM05D007441 ORTHO05D009501 8.5e-23 111.3 132 47.0
Medtr4g079220 Medicago truncatula HOM05D007441 ORTHO05D009501 1.8e-20 103.6 69 75.4
AUR62040474 Chenopodium quinoa HOM05D007441 ORTHO05D009501 3.7e-18 95.9 125 42.4
Os03g0854400 Oryza sativa ssp. japonica HOM05D007441 ORTHO05D009501 5.9e-16 88.6 140 37.1
CAN.G781.34 Capsicum annuum HOM05D007441 ORTHO05D009501 1.3e-15 87.4 77 57.1
Migut.I00040 Erythranthe guttata HOM05D007441 ORTHO05D009501 4.2e-14 82.4 129 39.5
SMO118G0028 Selaginella moellendorffii HOM05D007441 ORTHO05D009501 2.1e-13 80.1 125 36.0
SEGI_24388 Sequoiadendron giganteum HOM05D007441 ORTHO05D009501 8.0e-13 78.2 109 42.2
HPP92_004711 Vanilla planifolia HOM05D007441 ORTHO05D009501 3.9e-12 75.9 97 46.4


User provided reference genes

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