Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib084G0260 Durio zibethinus HOM05D005805 ORTHO05D007226 6.4e-172 607.8 435 100.0
Duzib205G1286 Durio zibethinus HOM05D005805 ORTHO05D007226 1.2e-138 497.3 435 88.5
Gohir.A03G015238 Gossypium hirsutum HOM05D005805 ORTHO05D007226 3.5e-130 469.2 444 84.0
Gorai.003G162800 Gossypium raimondii HOM05D005805 ORTHO05D007226 1.8e-126 456.8 453 79.5
Gohir.D03G155100 Gossypium hirsutum HOM05D005805 ORTHO05D007226 6.9e-126 454.9 453 79.2
Thecc.03G270600 Theobroma cacao HOM05D005805 ORTHO05D007226 3.8e-124 449.1 433 79.2
Gorai.004G207600 Gossypium raimondii HOM05D005805 ORTHO05D007226 6.5e-124 448.4 408 77.2
Duzib068G1011 Durio zibethinus HOM05D005805 ORTHO05D007226 1.1e-123 447.6 433 61.2
Gohir.A08G178400 Gossypium hirsutum HOM05D005805 ORTHO05D007226 7.4e-120 434.9 479 72.7
GSVIVG01019866001 Vitis vinifera HOM05D005805 ORTHO05D007226 6.1e-114 415.2 440 56.8
CiPaw.11G141700 Carya illinoinensis HOM05D005805 ORTHO05D007226 1.7e-111 407.1 456 64.9
TAR375G0540 Trochodendron aralioides HOM05D005805 ORTHO05D007226 2.0e-109 400.2 440 54.1
Eucgr.D01927 Eucalyptus grandis HOM05D005805 ORTHO05D007226 4.2e-107 392.5 431 52.4
Sed0020250 Sechium edule HOM05D005805 ORTHO05D007226 5.5e-107 392.1 446 51.8
TAR629G3121 Trochodendron aralioides HOM05D005805 ORTHO05D007226 1.2e-106 391.0 440 55.0
Ciclev10020090m.g Citrus clementina HOM05D005805 ORTHO05D007226 7.4e-104 381.7 465 69.0
CSS0012055 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 2.2e-103 380.2 440 50.7
QL12p017075 Quercus lobata HOM05D005805 ORTHO05D007226 1.4e-102 377.5 454 67.4
Actinidia02051 Actinidia chinensis HOM05D005805 ORTHO05D007226 1.5e-101 374.0 436 50.2
CSS0001301 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 3.5e-101 372.9 440 50.2
ClCG01G003160 Citrullus lanatus HOM05D005805 ORTHO05D007226 8.5e-100 368.2 488 48.0
Actinidia14511 Actinidia chinensis HOM05D005805 ORTHO05D007226 1.1e-99 367.9 439 49.4
Dinv39015 Davidia involucrata HOM05D005805 ORTHO05D007226 2.5e-99 366.7 411 52.8
VMungo1215G3124 Vigna mungo HOM05D005805 ORTHO05D007226 3.2e-99 366.3 442 50.2
Lalb_Chr16g0379971 Lupinus albus HOM05D005805 ORTHO05D007226 1.2e-98 364.4 440 49.1
MELO3C005626.2 Cucumis melo HOM05D005805 ORTHO05D007226 1.0e-97 361.3 426 50.7
Glyma.11G026600 Glycine max HOM05D005805 ORTHO05D007226 1.0e-97 361.3 455 49.5
Potri.001G111100 Populus trichocarpa HOM05D005805 ORTHO05D007226 1.0e-97 361.3 474 60.8
Ca_06662_v3 Cicer arietinum L. HOM05D005805 ORTHO05D007226 3.0e-97 359.8 446 48.9
Cfa012095 Carpinus fangiana HOM05D005805 ORTHO05D007226 3.9e-97 359.4 487 66.5
Potri.003G120900 Populus trichocarpa HOM05D005805 ORTHO05D007226 2.0e-96 357.1 485 63.3
CiPaw.12G099000 Carya illinoinensis HOM05D005805 ORTHO05D007226 3.3e-96 356.3 463 64.4
Hma1.2p1_0371F.1_g138200 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 4.8e-95 352.4 433 48.3
Glyma.01G215800 Glycine max HOM05D005805 ORTHO05D007226 1.1e-94 351.3 455 48.4
TWI60G0251 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 3.1e-94 349.7 480 66.0
Nn1g01331 Nelumbo nucifera HOM05D005805 ORTHO05D007226 4.1e-94 349.4 440 50.9
Nitab4.5_0009882g0030 Nicotiana tabacum HOM05D005805 ORTHO05D007226 4.1e-94 349.4 445 51.7
Phvul.002G153800 Phaseolus vulgaris HOM05D005805 ORTHO05D007226 4.1e-94 349.4 413 50.6
Lsat_1_v5_gn_6_12941 Lactuca sativa HOM05D005805 ORTHO05D007226 5.3e-94 349.0 439 48.7
arahy.Tifrunner.gnm1.ann1.8FZ8QS Arachis hypogaea HOM05D005805 ORTHO05D007226 1.2e-93 347.8 450 60.9
Prupe.5G089600 Prunus persica HOM05D005805 ORTHO05D007226 2.6e-93 346.7 516 58.5
vmacro00648 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 4.5e-93 345.9 423 48.7
TWI81G0996 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 1.3e-92 344.4 472 65.3
PGR031G2899 Punica granatum HOM05D005805 ORTHO05D007226 2.9e-92 343.2 435 57.2
TPR.G6662 Trifolium pratense HOM05D005805 ORTHO05D007226 8.5e-92 341.7 448 62.7
Lj2g0007037 Lotus japonicus HOM05D005805 ORTHO05D007226 1.5e-91 340.9 480 64.2
Migut.A00918 Erythranthe guttata HOM05D005805 ORTHO05D007226 4.2e-91 339.3 446 54.7
MD06G1071900 Malus domestica HOM05D005805 ORTHO05D007226 1.2e-90 337.8 501 56.1
Manes.01G068001 Manihot esculenta HOM05D005805 ORTHO05D007226 1.2e-90 337.8 429 70.6
Sabra01G0084700 Salix brachista HOM05D005805 ORTHO05D007226 8.0e-90 335.1 497 61.6
CAN.G981.40 Capsicum annuum HOM05D005805 ORTHO05D007226 1.0e-89 334.7 443 47.4
Lalb_Chr05g0214771 Lupinus albus HOM05D005805 ORTHO05D007226 3.0e-89 333.2 441 47.4
MD04G1068600 Malus domestica HOM05D005805 ORTHO05D007226 8.8e-89 331.6 502 61.2
Psat2g181520 Pisum sativum HOM05D005805 ORTHO05D007226 2.0e-88 330.5 445 59.1
Sopen08g028610 Solanum pennellii HOM05D005805 ORTHO05D007226 2.0e-88 330.5 442 46.6
Nitab4.5_0001714g0200 Nicotiana tabacum HOM05D005805 ORTHO05D007226 5.7e-88 328.9 416 51.7
CsaV3_5G003280 Cucumis sativus L. HOM05D005805 ORTHO05D007226 4.8e-87 325.9 376 49.5
Cc08_g13930 Coffea canephora HOM05D005805 ORTHO05D007226 1.4e-86 324.3 442 46.6
Solyc08g080260.4 Solanum lycopersicum HOM05D005805 ORTHO05D007226 3.1e-86 323.2 449 48.8
Peaxi162Scf00620g00920 Petunia axillaris HOM05D005805 ORTHO05D007226 5.4e-86 322.4 421 47.0
Medtr5g010950 Medicago truncatula HOM05D005805 ORTHO05D007226 1.6e-85 320.9 450 45.3
THA.LOC104814292 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 2.0e-85 320.5 446 54.5
PGSC0003DMG400022755 Solanum tuberosum HOM05D005805 ORTHO05D007226 3.8e-84 316.2 414 46.1
Sed0020925 Sechium edule HOM05D005805 ORTHO05D007226 8.5e-84 315.1 371 49.6
FAN13G0947 Fragaria x ananassa HOM05D005805 ORTHO05D007226 1.9e-83 313.9 485 59.4
FAN08G1094 Fragaria x ananassa HOM05D005805 ORTHO05D007226 3.2e-83 313.2 503 60.0
FvH4_5g01420 Fragaria vesca HOM05D005805 ORTHO05D007226 4.2e-83 312.8 493 59.2
THA.LOC104806368 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 7.2e-83 312.0 440 59.5
FAN18G3929 Fragaria x ananassa HOM05D005805 ORTHO05D007226 9.4e-83 311.6 493 59.2
RcHm_v2.0_Chr7g0199441 Rosa chinensis HOM05D005805 ORTHO05D007226 9.4e-83 311.6 515 59.4
HanXRQChr02g0048701 Helianthus annuus HOM05D005805 ORTHO05D007226 2.7e-82 310.1 436 44.5
Aqoxy7G00467 Aquilegia oxysepala HOM05D005805 ORTHO05D007226 4.0e-81 306.2 397 46.6
CANSAT21G1670 Cannabis sativa HOM05D005805 ORTHO05D007226 4.0e-81 306.2 526 57.8
FAN04G0223 Fragaria x ananassa HOM05D005805 ORTHO05D007226 2.0e-80 303.9 494 57.7
arahy.Tifrunner.gnm1.ann1.J6ALFQ Arachis hypogaea HOM05D005805 ORTHO05D007226 2.6e-80 303.5 517 51.1
Sc01g0008800 Simmondsia chinensis HOM05D005805 ORTHO05D007226 2.6e-80 303.5 459 53.4
Haze_08957 Corylus avellana HOM05D005805 ORTHO05D007226 4.4e-80 302.8 500 61.4
ECA233G3280 Erigeron canadensis HOM05D005805 ORTHO05D007226 1.7e-79 300.8 412 49.0
MBI04_g40844_MAGBIO Magnolia biondii HOM05D005805 ORTHO05D007226 3.7e-79 299.7 437 46.5
EL10Ac5g12722 Beta vulgaris HOM05D005805 ORTHO05D007226 3.1e-78 296.6 453 56.5
Oeu031590.1 Olea europaea HOM05D005805 ORTHO05D007226 1.6e-77 294.3 416 45.2
Dinv37696 Davidia involucrata HOM05D005805 ORTHO05D007226 5.9e-77 292.4 372 50.8
Thhalv10028709m.g Eutrema salsugineum HOM05D005805 ORTHO05D007226 1.3e-76 291.2 435 55.9
Lj2A197T60 Lonicera japonica HOM05D005805 ORTHO05D007226 1.7e-76 290.8 441 41.7
Aa31LG9G10640 Aethionema arabicum HOM05D005805 ORTHO05D007226 1.1e-75 288.1 435 54.9
BraA09t38298Z Brassica rapa HOM05D005805 ORTHO05D007226 1.1e-75 288.1 435 54.9
A02p25990 Brassica napus HOM05D005805 ORTHO05D007226 7.2e-75 285.4 445 48.1
BraA02t07597Z Brassica rapa HOM05D005805 ORTHO05D007226 7.2e-75 285.4 445 48.1
BolC9t56310H Brassica oleracea HOM05D005805 ORTHO05D007226 2.3e-73 280.4 435 50.6
PSO478G0076 Papaver somniferum HOM05D005805 ORTHO05D007226 1.2e-72 278.1 577 48.4
BcaB05g23807 Brassica carinata HOM05D005805 ORTHO05D007226 2.0e-72 277.3 436 53.2
Carub.0006s3090 Capsella rubella HOM05D005805 ORTHO05D007226 2.6e-72 276.9 443 61.6
HanXRQChr07g0188541 Helianthus annuus HOM05D005805 ORTHO05D007226 7.5e-72 275.4 396 49.0
AL6G46500 Arabidopsis lyrata HOM05D005805 ORTHO05D007226 2.9e-71 273.5 440 60.2
PSO782G3262 Papaver somniferum HOM05D005805 ORTHO05D007226 1.1e-70 271.6 582 48.5
A09p27320 Brassica napus HOM05D005805 ORTHO05D007226 1.4e-70 271.2 459 51.9
C09p34650 Brassica napus HOM05D005805 ORTHO05D007226 1.6e-69 267.7 459 47.7
CARHR254520 Cardamine hirsuta HOM05D005805 ORTHO05D007226 4.6e-69 266.2 437 53.8
Manes.02G028100 Manihot esculenta HOM05D005805 ORTHO05D007226 2.3e-68 263.8 368 70.1
AUR62010661 Chenopodium quinoa HOM05D005805 ORTHO05D007226 1.5e-67 261.2 453 53.4
Rhsim08G0109800 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.8e-66 256.9 184 71.2
Ah.12g057730 Amaranthus hybridus HOM05D005805 ORTHO05D007226 3.6e-66 256.5 476 48.7
AT4G11790 Arabidopsis thaliana HOM05D005805 ORTHO05D007226 8.0e-66 255.4 458 55.9
AUR62017300 Chenopodium quinoa HOM05D005805 ORTHO05D007226 5.2e-65 252.7 454 52.6
Oeu001898.3 Olea europaea HOM05D005805 ORTHO05D007226 6.8e-65 252.3 447 38.7
Hund28361 Selenicereus undatus HOM05D005805 ORTHO05D007226 1.2e-64 251.5 500 50.4
Hund28365 Selenicereus undatus HOM05D005805 ORTHO05D007226 1.2e-64 251.5 500 50.4
ATR0757G009 Amborella trichopoda HOM05D005805 ORTHO05D007226 9.8e-64 248.4 416 38.9
COL.COLO4_05276 Corchorus olitorius HOM05D005805 ORTHO05D007226 1.3e-63 248.1 138 90.6
Gohir.D08G196900 Gossypium hirsutum HOM05D005805 ORTHO05D007226 1.7e-63 247.7 141 89.4
Sp6g05660 Schrenkiella parvula HOM05D005805 ORTHO05D007226 1.7e-63 247.7 436 44.7
BcaC03g16328 Brassica carinata HOM05D005805 ORTHO05D007226 4.1e-62 243.0 362 50.6
HPP92_020989 Vanilla planifolia HOM05D005805 ORTHO05D007226 1.6e-61 241.1 444 37.4
CDE11G0359 Ceratophyllum demersum HOM05D005805 ORTHO05D007226 1.1e-57 228.4 484 39.0
unitig_8.g3899 Utricularia gibba HOM05D005805 ORTHO05D007226 1.8e-57 227.6 442 37.3
Zm00001eb073520 Zea mays HOM05D005805 ORTHO05D007226 9.8e-56 221.9 456 45.0
C02p41470 Brassica napus HOM05D005805 ORTHO05D007226 7.8e-53 212.2 356 48.6
Os03g0667700 Oryza sativa ssp. japonica HOM05D005805 ORTHO05D007226 3.9e-52 209.9 405 36.0
SalBow6G0943 Salvia bowleyana HOM05D005805 ORTHO05D007226 8.6e-52 208.8 397 43.6
TAR374G1484 Trochodendron aralioides HOM05D005805 ORTHO05D007226 3.3e-51 206.8 149 72.5
BcaB01g01678 Brassica carinata HOM05D005805 ORTHO05D007226 6.2e-50 202.6 452 35.0
vmacro10803 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 8.6e-44 182.2 404 35.4
Cpa.g.sc29.9 Carica papaya HOM05D005805 ORTHO05D007226 1.5e-40 171.4 453 33.6
Ah.02g116420 Amaranthus hybridus HOM05D005805 ORTHO05D007226 2.2e-39 167.5 447 39.4
Atru.chr9.1535 Acer truncatum HOM05D005805 ORTHO05D007226 9.3e-38 162.2 162 56.2
BolC2t10164H Brassica oleracea HOM05D005805 ORTHO05D007226 2.3e-36 157.5 109 72.5
AagrBONN_evm.TU.Sc2ySwM_344.4489 Anthoceros agrestis HOM05D005805 ORTHO05D007226 5.5e-22 109.8 356 32.3
COL.COLO4_05274 Corchorus olitorius HOM05D005805 ORTHO05D007226 4.6e-21 106.7 80 67.5
DCAR_006764 Daucus carota HOM05D005805 ORTHO05D007226 1.9e-19 101.3 162 42.6
SGA_v2.0_scaffold60G21020 Striga asiatica HOM05D011763 ORTHO05D014257 4.5e-16 90.1 80 55.0
Hma1.2p1_0002F.1_g002590 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 7.6e-16 89.4 115 46.1
SGA_v2.0_scaffold60G20821 Striga asiatica HOM05D011763 ORTHO05D014257 5.5e-14 83.2 101 48.5
CBR_g49019 Chara braunii HOM05D005805 ORTHO05D007226 2.1e-10 71.2 83 44.6


User provided reference genes

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