Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib084G0108 Durio zibethinus HOM05D000135 ORTHO05D000816 3.6e-40 169.5 176 100.0
Duzib068G0781 Durio zibethinus HOM05D000135 ORTHO05D000816 5.5e-17 92.4 50 90.0
Duzib205G1548 Durio zibethinus HOM05D000135 ORTHO05D000816 1.0e-15 88.2 50 84.0
Gohir.A03G053400 Gossypium hirsutum HOM05D000135 ORTHO05D000816 1.4e-15 87.8 50 86.0
Thecc.03G127000 Theobroma cacao HOM05D000135 ORTHO05D000816 1.5e-14 84.3 48 83.3
Gohir.D11G039500 Gossypium hirsutum HOM05D000135 ORTHO05D000816 1.7e-13 80.9 50 76.0
Gorai.007G042400 Gossypium raimondii HOM05D000135 ORTHO05D000816 1.7e-13 80.9 50 76.0
Gohir.A07G051650 Gossypium hirsutum HOM05D000135 ORTHO05D000816 3.1e-12 76.6 49 77.6
Gohir.D07G056100 Gossypium hirsutum HOM05D000135 ORTHO05D000816 3.1e-12 76.6 49 77.6
Gorai.001G059500 Gossypium raimondii HOM05D000135 ORTHO05D000816 3.1e-12 76.6 49 77.6
Gohir.A11G035900 Gossypium hirsutum HOM05D000135 ORTHO05D000816 7.0e-12 75.5 50 72.0
Gohir.A10G155722 Gossypium hirsutum HOM05D000135 ORTHO05D000816 1.2e-11 74.7 42 83.3
Gohir.D10G109651 Gossypium hirsutum HOM05D000135 ORTHO05D000816 1.2e-11 74.7 42 83.3
Glyma.05G047100 Glycine max HOM05D000135 ORTHO05D000816 2.2e-10 70.5 47 68.1
Glyma.17G128900 Glycine max HOM05D000135 ORTHO05D000816 2.9e-10 70.1 48 66.7
MD14G1158700 Malus domestica HOM05D000135 ORTHO05D000816 3.8e-10 69.7 47 72.3
Lalb_Chr08g0237071 Lupinus albus HOM05D000135 ORTHO05D000816 1.1e-09 68.2 49 63.3
MD06G1143500 Malus domestica HOM05D000135 ORTHO05D000816 1.5e-09 67.8 49 67.3
Glyma.06G171150 Glycine max HOM05D000135 ORTHO05D000816 1.9e-09 67.4 44 65.9
Haze_07233 Corylus avellana HOM05D000135 ORTHO05D000816 1.6e-08 64.3 51 62.7
Lj1g0021536 Lotus japonicus HOM05D000135 ORTHO05D000816 2.1e-08 63.9 50 62.0
VMungo1215G1953 Vigna mungo HOM05D000135 ORTHO05D000816 2.1e-08 63.9 44 65.9
Glyma.18G177900 Glycine max HOM05D000135 ORTHO05D000816 2.7e-08 63.5 44 61.4
TAR622G0710 Trochodendron aralioides HOM05D000135 ORTHO05D000816 3.6e-08 63.2 50 62.0
Glyma.04G136300 Glycine max HOM05D000135 ORTHO05D000816 4.7e-08 62.8 50 58.0
Lj4g0011466 Lotus japonicus HOM05D000135 ORTHO05D000816 4.7e-08 62.8 44 68.2
Medtr3g089070 Medicago truncatula HOM05D000135 ORTHO05D000816 4.7e-08 62.8 50 60.0
MELO3C026214.2 Cucumis melo HOM05D000135 ORTHO05D000816 6.1e-08 62.4 45 66.7
CsaV3_1G000650 Cucumis sativus L. HOM05D000135 ORTHO05D000816 6.1e-08 62.4 45 64.4
Glyma.04G136600 Glycine max HOM05D000135 ORTHO05D000816 6.1e-08 62.4 50 60.0
Lj4g0025643 Lotus japonicus HOM05D000135 ORTHO05D000816 6.1e-08 62.4 44 68.2
Atru.chr9.1078 Acer truncatum HOM05D000135 ORTHO05D000816 8.0e-08 62.0 46 60.9
Glyma.04G136200 Glycine max HOM05D000135 ORTHO05D000816 8.0e-08 62.0 50 58.0
Sed0012230 Sechium edule HOM05D000135 ORTHO05D000816 8.0e-08 62.0 43 69.8
Ca_24507_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 1.8e-07 60.8 50 56.0
ClCG06G017800 Citrullus lanatus HOM05D000135 ORTHO05D000816 1.8e-07 60.8 45 64.4
Glyma.04G194800 Glycine max HOM05D000135 ORTHO05D000816 1.8e-07 60.8 44 63.6
Medtr3g089090 Medicago truncatula HOM05D000135 ORTHO05D000816 1.8e-07 60.8 49 59.2
Ca_00913_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 2.3e-07 60.5 49 59.2
Ca_29979_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000816 2.3e-07 60.5 49 59.2
RcHm_v2.0_Chr7g0190421 Rosa chinensis HOM05D000135 ORTHO05D000816 2.3e-07 60.5 47 61.7
Cfa018839 Carpinus fangiana HOM05D000135 ORTHO05D000816 3.0e-07 60.1 51 56.9
Eucgr.B00125 Eucalyptus grandis HOM05D000135 ORTHO05D000816 3.0e-07 60.1 46 60.9
Phvul.003G210000 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 3.0e-07 60.1 47 57.4
Psat4g065400 Pisum sativum HOM05D000135 ORTHO05D000816 3.0e-07 60.1 45 57.8
TPR.G30002 Trifolium pratense HOM05D000135 ORTHO05D000816 3.0e-07 60.1 44 61.4
Glyma.11G157100 Glycine max HOM05D000135 ORTHO05D000816 4.0e-07 59.7 44 61.4
Medtr4g103650 Medicago truncatula HOM05D000135 ORTHO05D000816 4.0e-07 59.7 44 59.1
Psat0s3961g0120 Pisum sativum HOM05D000135 ORTHO05D000816 4.0e-07 59.7 45 57.8
Nitab4.5_0007815g0080 Nicotiana tabacum HOM05D000135 ORTHO05D000816 5.2e-07 59.3 175 28.6
Glyma.11G157200 Glycine max HOM05D000135 ORTHO05D000816 6.8e-07 58.9 44 61.4
Prupe.5G152700 Prunus persica HOM05D000135 ORTHO05D000816 6.8e-07 58.9 44 65.9
TAR622G0218 Trochodendron aralioides HOM05D000135 ORTHO05D000816 6.8e-07 58.9 50 58.0
Duzib147G0709 Durio zibethinus HOM05D000135 ORTHO05D000816 8.8e-07 58.5 47 59.6
Eucgr.B00123 Eucalyptus grandis HOM05D000135 ORTHO05D000816 8.8e-07 58.5 46 60.9
Eucgr.B00124 Eucalyptus grandis HOM05D000135 ORTHO05D000816 8.8e-07 58.5 46 58.7
Eucgr.B00128 Eucalyptus grandis HOM05D000135 ORTHO05D000816 8.8e-07 58.5 46 58.7
FvH4_5g08060 Fragaria vesca HOM05D000135 ORTHO05D000816 8.8e-07 58.5 41 65.9
FAN04G2593 Fragaria x ananassa HOM05D000135 ORTHO05D000816 8.8e-07 58.5 41 65.9
FAN08G0825 Fragaria x ananassa HOM05D000135 ORTHO05D000816 8.8e-07 58.5 41 65.9
FAN13G0461 Fragaria x ananassa HOM05D000135 ORTHO05D000816 8.8e-07 58.5 41 65.9
FAN18G3513 Fragaria x ananassa HOM05D000135 ORTHO05D000816 8.8e-07 58.5 41 65.9
Medtr4g103655 Medicago truncatula HOM05D000135 ORTHO05D000816 1.2e-06 58.2 44 59.1
Phvul.005G026000 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 1.2e-06 58.2 46 56.5
TAR629G1517 Trochodendron aralioides HOM05D000135 ORTHO05D000816 1.2e-06 58.2 50 56.0
COL.COLO4_28087 Corchorus olitorius HOM05D000135 ORTHO05D000816 1.5e-06 57.8 38 71.1
Eucgr.B00127 Eucalyptus grandis HOM05D000135 ORTHO05D000816 1.5e-06 57.8 46 58.7
Lalb_Chr11g0069631 Lupinus albus HOM05D000135 ORTHO05D000816 1.5e-06 57.8 44 61.4
Actinidia05909 Actinidia chinensis HOM05D000135 ORTHO05D000816 2.0e-06 57.4 173 27.2
Lj2C97T3 Lonicera japonica HOM05D000135 ORTHO05D000816 2.0e-06 57.4 48 56.2
Lalb_Chr12g0202161 Lupinus albus HOM05D000135 ORTHO05D000816 2.0e-06 57.4 44 63.6
Medtr4g103630 Medicago truncatula HOM05D000135 ORTHO05D000816 2.0e-06 57.4 44 56.8
Phvul.005G026100 Phaseolus vulgaris HOM05D000135 ORTHO05D000816 2.6e-06 57.0 48 54.2
VMungo1309G1946 Vigna mungo HOM05D000135 ORTHO05D000816 2.6e-06 57.0 43 62.8
Ciclev10022753m.g Citrus clementina HOM05D000135 ORTHO05D000816 3.4e-06 56.6 47 53.2
Haze_13933 Corylus avellana HOM05D000135 ORTHO05D000816 3.4e-06 56.6 45 62.2
Psat0s3961g0080 Pisum sativum HOM05D000135 ORTHO05D000816 3.4e-06 56.6 42 59.5
MD17G1014200 Malus domestica HOM05D000135 ORTHO05D000816 5.7e-06 55.8 45 60.0
Psat5g140800 Pisum sativum HOM05D000135 ORTHO05D000816 7.5e-06 55.5 49 51.0
Potri.002G132500 Populus trichocarpa HOM05D000135 ORTHO05D000816 7.5e-06 55.5 47 55.3
SGA_v2.0_scaffold47G17572 Striga asiatica HOM05D000135 ORTHO05D000816 7.5e-06 55.5 50 54.0
TWI14G0593 Tripterygium wilfordii HOM05D000135 ORTHO05D000816 7.5e-06 55.5 51 54.9
Psat0s14g0160 Pisum sativum HOM05D000135 ORTHO05D000816 9.8e-06 55.1 50 50.0


User provided reference genes

Program Settings