Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 1.5e-53 212.6 108 100.0
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 1.2e-50 203.0 108 95.4
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 9.9e-50 199.9 108 92.6
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 9.9e-50 199.9 108 92.6
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 9.9e-50 199.9 108 92.6
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 7.9e-47 190.3 108 91.7
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 2.3e-46 188.7 108 87.0
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 3.9e-46 188.0 108 89.8
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 6.7e-46 187.2 101 94.1
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 8.7e-46 186.8 108 86.1
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 5.6e-45 184.1 108 87.0
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 5.6e-45 184.1 101 91.1
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 1.3e-44 183.0 109 83.5
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 2.8e-44 181.8 108 82.4
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 4.8e-44 181.0 101 90.1
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 8.2e-44 180.3 109 84.4
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 5.3e-43 177.6 108 82.4
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 9.0e-43 176.8 104 86.5
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 1.5e-42 176.0 108 80.6
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 3.4e-42 174.9 106 84.0
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 3.4e-42 174.9 108 79.6
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 5.8e-42 174.1 107 80.4
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 5.8e-42 174.1 108 79.6
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 2.2e-41 172.2 108 85.2
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 3.8e-41 171.4 108 77.8
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 3.8e-41 171.4 101 86.1
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 4.9e-41 171.0 108 75.9
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 4.9e-41 171.0 108 80.6
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 6.5e-41 170.6 104 81.7
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 1.4e-40 169.5 101 77.2
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 1.9e-40 169.1 108 75.9
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 1.9e-40 169.1 97 86.6
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 1.9e-40 169.1 108 76.9
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 1.9e-40 169.1 108 76.9
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 2.5e-40 168.7 108 75.9
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 3.2e-40 168.3 97 85.6
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 3.2e-40 168.3 97 83.5
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 4.2e-40 167.9 108 77.8
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 4.2e-40 167.9 101 84.2
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 5.5e-40 167.5 97 85.6
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 5.5e-40 167.5 99 81.8
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 5.5e-40 167.5 110 77.3
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 7.1e-40 167.2 102 78.4
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 9.3e-40 166.8 108 75.0
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 9.3e-40 166.8 108 74.1
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 9.3e-40 166.8 101 75.2
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 1.6e-39 166.0 97 78.4
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 2.1e-39 165.6 108 74.1
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 2.1e-39 165.6 108 75.9
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 2.1e-39 165.6 101 76.2
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 2.7e-39 165.2 101 76.2
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 2.7e-39 165.2 97 77.3
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 4.6e-39 164.5 103 75.7
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 4.6e-39 164.5 103 75.7
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 4.6e-39 164.5 103 75.7
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 6.0e-39 164.1 108 73.1
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 1.0e-38 163.3 103 75.7
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 1.0e-38 163.3 99 80.8
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 1.3e-38 162.9 99 74.7
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 1.8e-38 162.5 106 79.2
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 3.0e-38 161.8 108 73.1
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 3.0e-38 161.8 108 75.0
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 3.9e-38 161.4 101 75.2
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 5.1e-38 161.0 108 73.1
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 6.7e-38 160.6 103 75.7
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 1.5e-37 159.5 101 72.3
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 1.5e-37 159.5 101 72.3
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 2.5e-37 158.7 136 65.4
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 2.8e-36 155.2 153 58.8
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 1.4e-35 152.9 99 69.7
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 1.8e-35 152.5 92 80.4
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 2.4e-35 152.1 101 70.3
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 9.0e-35 150.2 95 71.6
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 1.5e-34 149.4 104 67.3
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 2.0e-34 149.1 106 68.9
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 2.0e-34 149.1 99 72.7
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 2.0e-34 149.1 99 72.7
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 7.6e-34 147.1 92 76.1
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 7.6e-34 147.1 102 70.6
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 1.3e-33 146.4 91 74.7
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 3.8e-33 144.8 94 75.5
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 3.8e-33 144.8 92 77.2
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 3.8e-33 144.8 92 77.2
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 3.8e-33 144.8 92 76.1
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 5.0e-33 144.4 101 65.3
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 6.5e-33 144.1 95 73.7
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 8.5e-33 143.7 92 77.2
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 3.2e-32 141.7 87 80.5
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 4.2e-32 141.4 92 75.0
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 5.5e-32 141.0 110 65.5
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 5.5e-32 141.0 88 80.7
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 1.0e-30 136.7 92 69.6
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 1.4e-30 136.3 88 80.7
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 1.5e-29 132.9 88 78.4
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 1.5e-29 132.9 80 76.2
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 2.8e-28 128.6 80 73.8
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 6.9e-27 124.0 89 64.0
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 1.2e-26 123.2 98 60.2
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 1.5e-26 122.9 91 62.6
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 5.9e-26 120.9 90 63.3
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 1.4e-24 116.3 81 67.9
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 3.2e-24 115.2 88 71.6
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 9.4e-24 113.6 81 69.1
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 1.2e-23 113.2 81 70.4
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 6.1e-23 110.9 77 72.7
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 6.7e-22 107.5 92 56.5
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 8.8e-22 107.1 56 92.9
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 2.6e-21 105.5 89 56.2
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 2.8e-20 102.1 58 82.8
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 8.2e-20 100.5 70 65.7
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 2.0e-18 95.9 84 57.1
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 2.9e-17 92.0 53 83.0
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 3.8e-17 91.7 97 51.5
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 1.8e-14 82.8 58 69.0
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 9.4e-08 60.5 49 51.0
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 1.6e-07 59.7 51 58.8
MCO16G157 Micromonas commoda HOM05D006748 ORTHO05D008553 3.6e-07 58.5 88 31.8


User provided reference genes

Program Settings