Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib068G1429 Durio zibethinus HOM05D007643 ORTHO05D007801 5.9e-83 310.8 160 100.0
Thecc.03G110800 Theobroma cacao HOM05D007643 ORTHO05D007801 1.6e-67 259.6 161 84.5
COL.COLO4_28832 Corchorus olitorius HOM05D007643 ORTHO05D007801 1.0e-58 230.3 161 77.6
Gohir.D11G038100 Gossypium hirsutum HOM05D007643 ORTHO05D007801 3.3e-57 225.3 162 76.5
Gorai.007G040800 Gossypium raimondii HOM05D007643 ORTHO05D007801 5.6e-57 224.6 162 76.5
Gohir.D12G187200 Gossypium hirsutum HOM05D007643 ORTHO05D007801 1.4e-55 219.9 142 79.6
Gorai.008G200700 Gossypium raimondii HOM05D007643 ORTHO05D007801 2.3e-55 219.2 142 79.6
Gohir.A12G184500 Gossypium hirsutum HOM05D007643 ORTHO05D007801 1.5e-54 216.5 142 79.6
CiPaw.15G116100 Carya illinoinensis HOM05D007643 ORTHO05D007801 4.4e-38 161.8 153 58.2
Prupe.5G211300 Prunus persica HOM05D007643 ORTHO05D007801 2.2e-37 159.5 161 57.1
Ciclev10022625m.g Citrus clementina HOM05D007643 ORTHO05D007801 1.4e-36 156.8 148 55.4
Sed0015671 Sechium edule HOM05D007643 ORTHO05D007801 9.3e-36 154.1 160 55.6
ClCG06G015360 Citrullus lanatus HOM05D007643 ORTHO05D007801 1.2e-35 153.7 160 56.2
TWI81G0573 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 1.2e-35 153.7 146 58.9
CsaV3_1G003240 Cucumis sativus L. HOM05D007643 ORTHO05D007801 6.6e-34 147.9 160 55.6
TWI15G0080 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 6.6e-34 147.9 141 58.9
QL10p021414 Quercus lobata HOM05D007643 ORTHO05D007801 7.3e-33 144.4 167 51.5
RcHm_v2.0_Chr7g0183911 Rosa chinensis HOM05D007643 ORTHO05D007801 9.6e-33 144.1 159 52.8
FAN08G1142 Fragaria x ananassa HOM05D007643 ORTHO05D007801 4.8e-32 141.7 154 56.5
Cfa019854 Carpinus fangiana HOM05D007643 ORTHO05D007801 8.1e-32 141.0 127 57.5
FAN18G4512 Fragaria x ananassa HOM05D007643 ORTHO05D007801 5.3e-31 138.3 162 54.9
MD06G1206900 Malus domestica HOM05D007643 ORTHO05D007801 9.0e-31 137.5 159 52.8
Manes.14G090200 Manihot esculenta HOM05D007643 ORTHO05D007801 9.0e-31 137.5 122 58.2
Eucgr.K02633 Eucalyptus grandis HOM05D007643 ORTHO05D007801 1.5e-30 136.7 159 51.6
MD14G1217500 Malus domestica HOM05D007643 ORTHO05D007801 1.3e-29 133.7 160 51.2
Potri.012G065400 Populus trichocarpa HOM05D007643 ORTHO05D007801 2.2e-29 132.9 91 70.3
Phvul.009G176200 Phaseolus vulgaris HOM05D007643 ORTHO05D007801 1.1e-28 130.6 151 47.7
GSVIVG01008172001 Vitis vinifera HOM05D007643 ORTHO05D007801 1.1e-28 130.6 169 48.5
Sabra12G0046800 Salix brachista HOM05D007643 ORTHO05D007801 1.4e-28 130.2 96 66.7
Dinv36824 Davidia involucrata HOM05D007643 ORTHO05D007801 3.2e-28 129.0 105 59.0
Glyma.06G180500 Glycine max HOM05D007643 ORTHO05D007801 4.2e-28 128.6 121 52.1
Actinidia35057 Actinidia chinensis HOM05D007643 ORTHO05D007801 1.6e-27 126.7 117 52.1
Atru.chr9.639 Acer truncatum HOM05D007643 ORTHO05D007801 4.6e-27 125.2 100 64.0
Actinidia18967 Actinidia chinensis HOM05D007643 ORTHO05D007801 1.3e-26 123.6 149 45.0
MELO3C017259.2 Cucumis melo HOM05D007643 ORTHO05D007801 1.3e-26 123.6 90 66.7
PGR044G0452 Punica granatum HOM05D007643 ORTHO05D007801 1.8e-26 123.2 147 52.4
Glyma.04G185600 Glycine max HOM05D007643 ORTHO05D007801 2.3e-26 122.9 154 47.4
vmacro16469 Vaccinium macrocarpon HOM05D007643 ORTHO05D007801 1.5e-25 120.2 144 47.2
Dinv38625 Davidia involucrata HOM05D007643 ORTHO05D007801 1.9e-25 119.8 93 60.2
Rhsim12G0146900 Rhododendron simsii HOM05D000001 ORTHO05D000003 3.3e-25 119.0 115 51.3
CANSAT11G0293 Cannabis sativa HOM05D007643 ORTHO05D007801 4.3e-25 118.6 87 67.8
Lalb_Chr23g0273871 Lupinus albus HOM05D007643 ORTHO05D007801 5.6e-25 118.2 122 46.7
THA.LOC104800981 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 1.3e-24 117.1 158 46.2
THA.LOC104818362 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 2.1e-24 116.3 157 45.2
Aa31LG11G2440 Aethionema arabicum HOM05D007643 ORTHO05D007801 4.8e-24 115.2 155 45.2
PSO782G0046 Papaver somniferum HOM05D007643 ORTHO05D007801 1.4e-23 113.6 143 44.1
PSO063G2669 Papaver somniferum HOM05D007643 ORTHO05D007801 2.4e-23 112.8 143 44.1
Lj1g0019261 Lotus japonicus HOM05D007643 ORTHO05D007801 7.6e-22 107.8 156 46.2
Medtr2g059060 Medicago truncatula HOM05D007643 ORTHO05D007801 8.4e-21 104.4 149 40.9
arahy.Tifrunner.gnm1.ann1.Z569TI Arachis hypogaea HOM05D007643 ORTHO05D007801 4.2e-20 102.1 159 44.7
Manes.06G079602 Manihot esculenta HOM05D007643 ORTHO05D007801 5.5e-20 101.7 135 48.1
TPR.G15310 Trifolium pratense HOM05D007643 ORTHO05D007801 7.1e-20 101.3 139 43.9
CSS0044770 Camellia sinensis var. sinensis HOM05D007643 ORTHO05D007801 1.8e-18 96.7 87 54.0
Ca_26376_v3 Cicer arietinum L. HOM05D007643 ORTHO05D007801 6.7e-18 94.7 157 41.4
FvH4_5g13250 Fragaria vesca HOM05D007643 ORTHO05D007801 1.1e-17 94.0 113 54.9
Psat1g029200 Pisum sativum HOM05D007643 ORTHO05D007801 1.9e-17 93.2 157 39.5
ATR0691G209 Amborella trichopoda HOM05D007643 ORTHO05D007801 4.3e-17 92.0 107 46.7
Migut.G00548 Erythranthe guttata HOM05D007643 ORTHO05D007801 1.3e-16 90.5 152 40.1
Oeu059396.1 Olea europaea HOM05D007643 ORTHO05D007801 1.6e-16 90.1 89 52.8
Sp2g24160 Schrenkiella parvula HOM05D010173 ORTHO05D007801 3.7e-16 89.0 163 36.8
CDE02G0802 Ceratophyllum demersum HOM05D007643 ORTHO05D007801 6.2e-16 88.2 80 53.8
CAN.G982.32 Capsicum annuum HOM05D007643 ORTHO05D007801 1.1e-15 87.4 108 42.6
HPP92_019460 Vanilla planifolia HOM05D007643 ORTHO05D007801 1.1e-15 87.4 146 40.4
Peaxi162Scf00017g03267 Petunia axillaris HOM05D007643 ORTHO05D007801 1.4e-15 87.0 87 51.7
Thhalv10004975m.g Eutrema salsugineum HOM05D010173 ORTHO05D007801 1.8e-15 86.7 142 40.1
MSTRG.9860 Avicennia marina HOM05D007643 ORTHO05D007801 2.4e-15 86.3 149 38.3
Nitab4.5_0000646g0290 Nicotiana tabacum HOM05D007643 ORTHO05D007801 5.3e-15 85.1 139 37.4
Nitab4.5_0002805g0050 Nicotiana tabacum HOM05D007643 ORTHO05D007801 5.3e-15 85.1 139 38.1
Cc04_g08010 Coffea canephora HOM05D007643 ORTHO05D007801 9.0e-15 84.3 142 39.4
MSTRG.4170 Avicennia marina HOM05D007643 ORTHO05D007801 5.8e-14 81.6 124 41.1
Lsat_1_v5_gn_4_112541 Lactuca sativa HOM05D007643 ORTHO05D007801 5.8e-14 81.6 98 49.0
Aqoxy3G03786 Aquilegia oxysepala HOM05D007643 ORTHO05D007801 1.0e-13 80.9 166 37.3
SEGI_00634 Sequoiadendron giganteum HOM05D007643 ORTHO05D007801 1.7e-13 80.1 94 47.9
Nn3g17593 Nelumbo nucifera HOM05D007643 ORTHO05D007801 2.2e-13 79.7 68 55.9
SGA_v2.0_scaffold67G22694 Striga asiatica HOM05D007643 ORTHO05D007801 2.9e-13 79.3 90 48.9
AUR62032152 Chenopodium quinoa HOM05D007643 ORTHO05D007801 6.5e-13 78.2 97 47.4
Os09g0473966 Oryza sativa ssp. japonica HOM05D007643 ORTHO05D007801 6.5e-13 78.2 64 57.8
BcaC06g33198 Brassica carinata HOM05D010173 ORTHO05D007801 1.9e-12 76.6 147 34.7
unitig_746.g26846 Utricularia gibba HOM05D007643 ORTHO05D007801 1.9e-12 76.6 87 44.8
VMungo1309G0126 Vigna mungo HOM05D007643 ORTHO05D007801 1.9e-12 76.6 86 48.8
BraA03t13778Z Brassica rapa HOM05D010173 ORTHO05D007801 3.2e-12 75.9 136 34.6
BcaNung05759 Brassica carinata HOM05D010173 ORTHO05D007801 7.1e-12 74.7 101 39.6
PGSC0003DMG400024520 Solanum tuberosum HOM05D007643 ORTHO05D007801 9.3e-12 74.3 143 36.4
A03p46540 Brassica napus HOM05D010173 ORTHO05D007801 1.6e-11 73.6 146 34.9
AUR62039686 Chenopodium quinoa HOM05D007643 ORTHO05D007801 1.6e-11 73.6 98 46.9
Nitab4.5_0004190g0030 Nicotiana tabacum HOM05D007643 ORTHO05D007801 1.6e-11 73.6 90 47.8
Sopen03g033740 Solanum pennellii HOM05D007643 ORTHO05D007801 1.6e-11 73.6 87 46.0
Carub.0008s2154 Capsella rubella HOM05D010173 ORTHO05D007801 2.1e-11 73.2 132 34.1
Sed0026794 Sechium edule HOM05D007643 ORTHO05D007801 2.7e-11 72.8 107 44.9
AT5G60840 Arabidopsis thaliana HOM05D010173 ORTHO05D007801 4.6e-11 72.0 129 37.2
AL269U10030 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 7.9e-11 71.2 125 38.4
ECA232G2778 Erigeron canadensis HOM05D007643 ORTHO05D007801 1.8e-10 70.1 62 53.2
Zm00001eb101340 Zea mays HOM05D007643 ORTHO05D007801 1.8e-10 70.1 77 49.4
Ah.02g114340 Amaranthus hybridus HOM05D007643 ORTHO05D007801 2.3e-10 69.7 126 38.1
BcaNung02618 Brassica carinata HOM05D010173 ORTHO05D007801 3.0e-10 69.3 126 34.1
C07p44600 Brassica napus HOM05D010173 ORTHO05D007801 3.0e-10 69.3 126 34.1
BolC7t44981H Brassica oleracea HOM05D010173 ORTHO05D007801 3.0e-10 69.3 126 34.1
Nitab4.5_0002449g0120 Nicotiana tabacum HOM05D007643 ORTHO05D007801 3.0e-10 69.3 75 49.3
AL3G41380 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 3.9e-10 68.9 133 38.3
Haze_18546 Corylus avellana HOM05D007643 ORTHO05D007801 3.9e-10 68.9 64 54.7
AL269U10022 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 5.1e-10 68.6 133 38.3
AL269U10040 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 5.1e-10 68.6 133 38.3
AL269U10050 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 5.1e-10 68.6 133 38.3
AL3G41370 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 5.1e-10 68.6 133 38.3
AL3G41390 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 5.1e-10 68.6 133 38.3
Zm00001eb199190 Zea mays HOM05D031404 ORTHO05D007801 6.7e-10 68.2 77 46.8
AL8G37440 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 2.5e-09 66.2 143 34.3
Cpa.g.sc3.212 Carica papaya HOM05D007643 ORTHO05D007801 3.3e-09 65.9 62 54.8
FAN13G0443 Fragaria x ananassa HOM05D007643 ORTHO05D007801 1.3e-08 63.9 48 64.6
Zm00001eb033620 Zea mays HOM05D031404 ORTHO05D007801 1.3e-08 63.9 130 34.6
BcaNung02617 Brassica carinata HOM05D010173 ORTHO05D007801 2.2e-08 63.2 133 32.3
Solyc06g069350.3 Solanum lycopersicum HOM05D007643 ORTHO05D007801 1.1e-07 60.8 91 42.9
EL10Ac5g11201 Beta vulgaris HOM05D007643 ORTHO05D007801 2.4e-07 59.7 71 46.5
CARHR274520 Cardamine hirsuta HOM05D010173 ORTHO05D007801 1.2e-06 57.4 120 31.7
Mapoly0143s0033 Marchantia polymorpha HOM05D022757 ORTHO05D024951 4.5e-06 55.5 88 36.4
Mapoly0124s0005 Marchantia polymorpha HOM05D022757 ORTHO05D024951 7.7e-06 54.7 84 35.7
TAR374G0331 Trochodendron aralioides HOM05D007643 ORTHO05D007801 7.7e-06 54.7 95 37.9


User provided reference genes

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