Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib068G1405 Durio zibethinus HOM05D006023 ORTHO05D007377 1.1e-101 373.2 181 100.0
Gohir.A06G181300 Gossypium hirsutum HOM05D006023 ORTHO05D007377 1.1e-48 197.2 143 72.0
Gohir.D08G176200 Gossypium hirsutum HOM05D006023 ORTHO05D007377 2.4e-48 196.1 143 72.7
Gorai.004G184000 Gossypium raimondii HOM05D006023 ORTHO05D007377 2.4e-48 196.1 143 72.7
Gohir.D06G188100 Gossypium hirsutum HOM05D006023 ORTHO05D007377 1.6e-47 193.4 143 70.6
Gohir.A08G155600 Gossypium hirsutum HOM05D006023 ORTHO05D007377 7.7e-47 191.0 143 71.3
Gorai.010G220500 Gossypium raimondii HOM05D006023 ORTHO05D007377 2.3e-46 189.5 143 69.9
COL.COLO4_16998 Corchorus olitorius HOM05D006023 ORTHO05D007377 4.4e-42 175.3 148 66.9
Thecc.08G177100 Theobroma cacao HOM05D006023 ORTHO05D007377 5.7e-42 174.9 127 74.0
Eucgr.D02210 Eucalyptus grandis HOM05D006023 ORTHO05D007377 1.4e-40 170.2 148 60.8
Hma1.2p1_1379F.1_g279210 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 9.2e-40 167.5 127 70.1
TAR375G0242 Trochodendron aralioides HOM05D006023 ORTHO05D007377 7.8e-39 164.5 148 60.1
CSS0050040 Camellia sinensis var. sinensis HOM05D006023 ORTHO05D007377 1.7e-38 163.3 127 68.5
Dinv28972 Davidia involucrata HOM05D006023 ORTHO05D007377 5.0e-38 161.8 127 68.5
Cfa012466 Carpinus fangiana HOM05D006023 ORTHO05D007377 1.1e-37 160.6 156 57.7
Actinidia09185 Actinidia chinensis HOM05D006023 ORTHO05D007377 1.9e-37 159.8 150 58.7
Prupe.5G032500 Prunus persica HOM05D006023 ORTHO05D007377 3.3e-37 159.1 121 68.6
Actinidia14795 Actinidia chinensis HOM05D006023 ORTHO05D007377 4.3e-37 158.7 148 58.8
Nn5g27684 Nelumbo nucifera HOM05D006023 ORTHO05D007377 2.8e-36 156.0 121 68.6
MD06G1036800 Malus domestica HOM05D006023 ORTHO05D007377 8.0e-36 154.5 120 65.8
Manes.02G087300 Manihot esculenta HOM05D006023 ORTHO05D007377 1.0e-35 154.1 127 66.1
GSVIVG01013134001 Vitis vinifera HOM05D006023 ORTHO05D007377 1.0e-35 154.1 127 64.6
CsaV3_6G000520 Cucumis sativus L. HOM05D006023 ORTHO05D007377 1.4e-35 153.7 157 56.1
MELO3C021213.2 Cucumis melo HOM05D006023 ORTHO05D007377 4.0e-35 152.1 156 55.1
CiPaw.12G065700 Carya illinoinensis HOM05D006023 ORTHO05D007377 6.8e-35 151.4 127 66.9
FvH4_5g22440 Fragaria vesca HOM05D006023 ORTHO05D007377 8.9e-35 151.0 129 65.1
FAN18G1789 Fragaria x ananassa HOM05D006023 ORTHO05D007377 1.2e-34 150.6 129 65.1
Migut.F00744 Erythranthe guttata HOM05D006023 ORTHO05D007377 1.5e-34 150.2 153 54.9
arahy.Tifrunner.gnm1.ann1.NMD1RU Arachis hypogaea HOM05D006023 ORTHO05D007377 2.0e-34 149.8 130 63.8
MBI04_g41609_MAGBIO Magnolia biondii HOM05D006023 ORTHO05D007377 2.0e-34 149.8 121 64.5
Sed0006289 Sechium edule HOM05D006023 ORTHO05D007377 2.0e-34 149.8 121 65.3
FAN08G2226 Fragaria x ananassa HOM05D006023 ORTHO05D007377 3.4e-34 149.1 129 64.3
Peaxi162Scf00184g00013 Petunia axillaris HOM05D006023 ORTHO05D007377 3.4e-34 149.1 145 57.9
DCAR_004289 Daucus carota HOM05D006023 ORTHO05D007377 5.8e-34 148.3 121 63.6
FAN04G1629 Fragaria x ananassa HOM05D006023 ORTHO05D007377 5.8e-34 148.3 145 57.2
Potri.003G093800 Populus trichocarpa HOM05D006023 ORTHO05D007377 5.8e-34 148.3 122 63.9
RcHm_v2.0_Chr7g0210201 Rosa chinensis HOM05D006023 ORTHO05D007377 5.8e-34 148.3 128 64.1
RcHm_v2.0_Chr7g0210231 Rosa chinensis HOM05D006023 ORTHO05D007377 5.8e-34 148.3 128 64.1
arahy.Tifrunner.gnm1.ann1.7BP5M1 Arachis hypogaea HOM05D006023 ORTHO05D007377 7.5e-34 147.9 130 63.1
arahy.Tifrunner.gnm1.ann1.T01SKW Arachis hypogaea HOM05D006023 ORTHO05D007377 7.5e-34 147.9 130 63.1
CAN.G298.27 Capsicum annuum HOM05D006023 ORTHO05D007377 7.5e-34 147.9 125 63.2
FAN13G0319 Fragaria x ananassa HOM05D006023 ORTHO05D007377 7.5e-34 147.9 123 65.0
Lsat_1_v5_gn_6_80341 Lactuca sativa HOM05D006023 ORTHO05D007377 7.5e-34 147.9 142 57.0
Lj5g0000896 Lotus japonicus HOM05D006023 ORTHO05D007377 1.7e-33 146.7 131 62.6
Nitab4.5_0004555g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 1.7e-33 146.7 151 55.6
Aqoxy4G02643 Aquilegia oxysepala HOM05D006023 ORTHO05D007377 2.2e-33 146.4 130 60.0
Atru.chr6.1650 Acer truncatum HOM05D006023 ORTHO05D007377 2.9e-33 146.0 127 64.6
Lj2A236G57 Lonicera japonica HOM05D006023 ORTHO05D007377 2.9e-33 146.0 122 64.8
PSO782G2387 Papaver somniferum HOM05D006023 ORTHO05D007377 2.9e-33 146.0 125 62.4
Glyma.10G212800 Glycine max HOM05D006023 ORTHO05D007377 4.9e-33 145.2 131 61.1
ECA240G0359 Erigeron canadensis HOM05D006023 ORTHO05D007377 8.3e-33 144.4 121 60.3
Ca_10583_v3 Cicer arietinum L. HOM05D006023 ORTHO05D007377 1.4e-32 143.7 131 60.3
Medtr1g095620 Medicago truncatula HOM05D006023 ORTHO05D007377 1.4e-32 143.7 129 62.0
Oeu006244.1 Olea europaea HOM05D006023 ORTHO05D007377 1.4e-32 143.7 141 56.0
PSO675G2981 Papaver somniferum HOM05D006023 ORTHO05D007377 1.4e-32 143.7 144 56.2
PGR031G2123 Punica granatum HOM05D006023 ORTHO05D007377 1.4e-32 143.7 127 61.4
Hma1.2p1_0303F.1_g118960 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 1.9e-32 143.3 121 62.0
Rhsim07G0128700 Rhododendron simsii HOM05D006023 ORTHO05D007377 1.9e-32 143.3 185 47.6
PGSC0003DMG400027709 Solanum tuberosum HOM05D006023 ORTHO05D007377 1.9e-32 143.3 151 53.0
THA.LOC104806716 Tarenaya hassleriana HOM05D006023 ORTHO05D007377 1.9e-32 143.3 129 62.0
TWI81G0073 Tripterygium wilfordii HOM05D006023 ORTHO05D007377 1.9e-32 143.3 128 63.3
CANSAT21G1027 Cannabis sativa HOM05D006023 ORTHO05D007377 2.4e-32 142.9 121 61.2
Psat6g182880 Pisum sativum HOM05D006023 ORTHO05D007377 2.4e-32 142.9 129 60.5
AL8G27580 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 5.4e-32 141.7 133 61.7
Glyma.20G178200 Glycine max HOM05D006023 ORTHO05D007377 5.4e-32 141.7 131 60.3
Cc08_g03000 Coffea canephora HOM05D006023 ORTHO05D007377 9.2e-32 141.0 162 49.4
Thhalv10014686m.g Eutrema salsugineum HOM05D006023 ORTHO05D007377 9.2e-32 141.0 129 61.2
Hund11133 Selenicereus undatus HOM05D006023 ORTHO05D007377 1.2e-31 140.6 131 59.5
BcaB05g21996 Brassica carinata HOM05D006023 ORTHO05D007377 1.6e-31 140.2 133 60.2
TPR.G1759 Trifolium pratense HOM05D006023 ORTHO05D007377 2.0e-31 139.8 129 61.2
Aa31LG3G9490 Aethionema arabicum HOM05D006023 ORTHO05D007377 2.7e-31 139.4 147 54.4
Cpa.g.c32853 Carica papaya HOM05D006023 ORTHO05D007377 2.7e-31 139.4 121 62.0
AL4G21070 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 3.5e-31 139.0 124 62.9
SGA_v2.0_scaffold6G03147 Striga asiatica HOM05D006023 ORTHO05D007377 3.5e-31 139.0 155 51.6
Sp6g15140 Schrenkiella parvula HOM05D006023 ORTHO05D007377 4.6e-31 138.7 131 60.3
Sc01g0007360 Simmondsia chinensis HOM05D006023 ORTHO05D007377 4.6e-31 138.7 134 59.0
VMungo0720G0064 Vigna mungo HOM05D005934 ORTHO05D005165 4.6e-31 138.7 118 62.7
CARHR265970 Cardamine hirsuta HOM05D006023 ORTHO05D007377 6.0e-31 138.3 123 61.8
Lalb_Chr17g0341511 Lupinus albus HOM05D006023 ORTHO05D007377 6.0e-31 138.3 129 60.5
A10p10460 Brassica napus HOM05D006023 ORTHO05D007377 7.8e-31 137.9 134 59.0
HPP92_020908 Vanilla planifolia HOM05D006023 ORTHO05D007377 7.8e-31 137.9 143 53.8
AUR62018698 Chenopodium quinoa HOM05D006023 ORTHO05D007377 1.0e-30 137.5 123 61.8
Sopen10g027320 Solanum pennellii HOM05D006023 ORTHO05D007377 1.0e-30 137.5 151 51.7
SGA_v2.0_scaffold196G40921 Striga asiatica HOM05D006023 ORTHO05D007377 1.0e-30 137.5 153 51.6
MSTRG.15799 Avicennia marina HOM05D006023 ORTHO05D007377 1.3e-30 137.1 114 64.9
EL10Ac5g12082 Beta vulgaris HOM05D006023 ORTHO05D007377 1.3e-30 137.1 131 59.5
AL8G27520 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 1.7e-30 136.7 136 58.8
A02p11390 Brassica napus HOM05D006023 ORTHO05D007377 1.7e-30 136.7 132 59.1
C02p18900 Brassica napus HOM05D006023 ORTHO05D007377 1.7e-30 136.7 132 59.1
BolC2t08031H Brassica oleracea HOM05D006023 ORTHO05D007377 1.7e-30 136.7 132 59.1
BraA02t06203Z Brassica rapa HOM05D006023 ORTHO05D007377 1.7e-30 136.7 132 59.1
Nitab4.5_0002808g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 1.7e-30 136.7 135 56.3
Sopen08g025290 Solanum pennellii HOM05D006023 ORTHO05D007377 2.3e-30 136.3 148 51.4
BraA10t43129Z Brassica rapa HOM05D006023 ORTHO05D007377 3.0e-30 136.0 136 58.1
PSO063G6826 Papaver somniferum HOM05D006023 ORTHO05D007377 3.9e-30 135.6 114 62.3
Phvul.007G092700 Phaseolus vulgaris HOM05D006023 ORTHO05D007377 3.9e-30 135.6 130 59.2
AT5G52980 Arabidopsis thaliana HOM05D006023 ORTHO05D007377 6.6e-30 134.8 119 62.2
C09p42690 Brassica napus HOM05D006023 ORTHO05D007377 8.6e-30 134.4 140 56.4
BolC9t57145H Brassica oleracea HOM05D006023 ORTHO05D007377 8.6e-30 134.4 140 56.4
Carub.0008s1318 Capsella rubella HOM05D006023 ORTHO05D007377 1.5e-29 133.7 137 56.9
BcaC03g14468 Brassica carinata HOM05D006023 ORTHO05D007377 3.3e-29 132.5 132 59.1
unitig_21.g20896 Utricularia gibba HOM05D006023 ORTHO05D007377 3.3e-29 132.5 147 53.7
Ah.07g200580 Amaranthus hybridus HOM05D006023 ORTHO05D007377 1.6e-28 130.2 128 56.2
CDE06G2650 Ceratophyllum demersum HOM05D006023 ORTHO05D007377 2.3e-27 126.3 104 62.5
PSO541G2859 Papaver somniferum HOM05D006023 ORTHO05D007377 3.7e-25 119.0 110 55.5
ATR0665G562 Amborella trichopoda HOM05D006023 ORTHO05D007377 4.9e-25 118.6 109 58.7
Hma1.2p1_0574F.1_g181560 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 1.0e-22 110.9 84 66.7
Hma1.2p1_1379F.1_g279205 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 1.0e-22 110.9 84 66.7
Mapoly0102s0011 Marchantia polymorpha HOM05D006023 ORTHO05D007377 3.9e-22 109.0 126 46.0
vmacro14181 Vaccinium macrocarpon HOM05D006023 ORTHO05D007377 7.3e-21 104.8 99 57.6
Ciclev10022247m.g Citrus clementina HOM05D006023 ORTHO05D007377 3.6e-20 102.4 139 45.3
FAN18G2414 Fragaria x ananassa HOM05D006023 ORTHO05D007377 8.1e-20 101.3 74 71.6
CBR_g88177 Chara braunii HOM05D006023 ORTHO05D007377 1.1e-19 100.9 106 50.0
HanXRQChr13g0414191 Helianthus annuus HOM05D006023 ORTHO05D007377 1.2e-18 97.4 78 59.0
AagrBONN_evm.TU.Sc2ySwM_228.1949 Anthoceros agrestis HOM05D006023 ORTHO05D007377 8.3e-17 91.3 105 48.6
Pp3c18_16040 Physcomitrium patens HOM05D006023 ORTHO05D007377 5.4e-16 88.6 110 42.7
AUR62007305 Chenopodium quinoa HOM05D006023 ORTHO05D007377 1.6e-15 87.0 75 61.3
Solyc08g076740.4 Solanum lycopersicum HOM05D006023 ORTHO05D007377 3.5e-15 85.9 73 61.6
Zm00001eb024850 Zea mays HOM05D006023 ORTHO05D007377 7.8e-15 84.7 80 53.8
SMO143G0066 Selaginella moellendorffii HOM05D006023 ORTHO05D007377 6.6e-14 81.6 63 54.0
SEGI_36898 Sequoiadendron giganteum HOM05D006023 ORTHO05D007377 1.2e-12 77.4 63 61.9
MD16G1272600 Malus domestica HOM05D006023 ORTHO05D007377 8.1e-12 74.7 48 72.9
Solyc10g074822.1 Solanum lycopersicum HOM05D006023 ORTHO05D007377 8.9e-11 71.2 47 72.3
PGSC0003DMG400017522 Solanum tuberosum HOM05D006023 ORTHO05D007377 1.2e-07 60.8 77 44.2
Solyc08g076770.4 Solanum lycopersicum HOM05D006023 ORTHO05D007377 2.7e-07 59.7 77 42.9
Dinv25231 Davidia involucrata HOM05D006023 ORTHO05D007377 6.0e-07 58.5 55 60.0
FAN18G1032 Fragaria x ananassa HOM05D006023 ORTHO05D007377 1.7e-06 57.0 76 44.7


User provided reference genes

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