Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib068G1391 Durio zibethinus HOM05D005518 ORTHO05D001269 9.6e-243 843.2 463 100.0
Thecc.03G124400 Theobroma cacao HOM05D005518 ORTHO05D001269 3.2e-97 359.8 252 79.0
Gorai.006G270900 Gossypium raimondii HOM05D005518 ORTHO05D001269 3.7e-93 346.3 254 76.8
Gohir.D09G246400 Gossypium hirsutum HOM05D005518 ORTHO05D001269 9.1e-92 341.7 254 76.0
Gohir.A09G245800 Gossypium hirsutum HOM05D005518 ORTHO05D001269 2.0e-91 340.5 253 76.7
Duzib205G1346 Durio zibethinus HOM05D005518 ORTHO05D001269 1.0e-87 328.2 254 74.8
COL.COLO4_16831 Corchorus olitorius HOM05D005518 ORTHO05D001269 2.6e-86 323.6 254 73.2
Gorai.007G042000 Gossypium raimondii HOM05D005518 ORTHO05D001269 3.1e-84 316.6 252 73.0
Gohir.D11G039100 Gossypium hirsutum HOM05D005518 ORTHO05D001269 9.1e-84 315.1 252 72.6
Gohir.A11G035500 Gossypium hirsutum HOM05D005518 ORTHO05D001269 5.9e-83 312.4 252 71.8
Duzib084G0018 Durio zibethinus HOM05D005518 ORTHO05D001269 6.3e-77 292.4 384 51.0
CANSAT80G2082 Cannabis sativa HOM05D005518 ORTHO05D001269 3.0e-71 273.5 263 62.0
Cpa.g.sc4.97 Carica papaya HOM05D005518 ORTHO05D001269 2.8e-64 250.4 256 59.0
Sabra12G0068800 Salix brachista HOM05D005518 ORTHO05D001269 6.1e-64 249.2 257 60.7
Haze_07258 Corylus avellana HOM05D005518 ORTHO05D001269 5.2e-63 246.1 258 58.1
Eucgr.K02750 Eucalyptus grandis HOM05D005518 ORTHO05D001269 2.4e-60 237.3 253 56.5
CiPaw.12G036400 Carya illinoinensis HOM05D005518 ORTHO05D001269 1.6e-59 234.6 255 56.9
Prupe.5G155700 Prunus persica HOM05D005518 ORTHO05D001269 4.5e-59 233.0 261 56.7
Potri.012G094200 Populus trichocarpa HOM05D005518 ORTHO05D001269 1.5e-57 228.0 252 57.5
MD14G1162500 Malus domestica HOM05D005518 ORTHO05D001269 3.3e-57 226.9 263 53.2
Atru.chr9.1022 Acer truncatum HOM05D005518 ORTHO05D001269 5.6e-57 226.1 251 56.6
PGR044G0025 Punica granatum HOM05D005518 ORTHO05D001269 9.5e-57 225.3 263 55.5
QL10p004779 Quercus lobata HOM05D005518 ORTHO05D001269 9.5e-57 225.3 250 56.4
TWI14G0969 Tripterygium wilfordii HOM05D005518 ORTHO05D001269 3.6e-56 223.4 268 54.9
CiPaw.11G011000 Carya illinoinensis HOM05D005518 ORTHO05D001269 4.7e-56 223.0 254 53.5
Sabra15G0113400 Salix brachista HOM05D005518 ORTHO05D001269 4.7e-56 223.0 275 53.5
GSVIVG01003640001 Vitis vinifera HOM05D005518 ORTHO05D001269 4.7e-56 223.0 369 47.7
RcHm_v2.0_Chr7g0190821 Rosa chinensis HOM05D005518 ORTHO05D001269 6.1e-56 222.6 260 53.8
Potri.015G091500 Populus trichocarpa HOM05D005518 ORTHO05D001269 4.0e-55 219.9 254 55.9
Dinv04847 Davidia involucrata HOM05D005518 ORTHO05D001269 2.0e-54 217.6 261 57.5
FAN04G1413 Fragaria x ananassa HOM05D005518 ORTHO05D001269 1.3e-53 214.9 262 51.9
FAN13G1318 Fragaria x ananassa HOM05D005518 ORTHO05D001269 1.3e-53 214.9 262 51.9
RcHm_v2.0_Chr1g0380401 Rosa chinensis HOM05D005518 ORTHO05D001269 3.7e-53 213.4 260 52.3
Actinidia16187 Actinidia chinensis HOM05D005518 ORTHO05D001269 1.4e-52 211.5 259 55.2
FvH4_5g07650 Fragaria vesca HOM05D005518 ORTHO05D001269 4.1e-52 209.9 262 50.8
FAN18G1514 Fragaria x ananassa HOM05D000557 ORTHO05D001269 2.7e-51 207.2 262 50.4
FAN25G1054 Fragaria x ananassa HOM05D005518 ORTHO05D001269 2.7e-51 207.2 262 50.4
FAN08G0706 Fragaria x ananassa HOM05D005518 ORTHO05D001269 3.0e-50 203.8 262 50.0
Manes.06G116500 Manihot esculenta HOM05D005518 ORTHO05D001269 1.5e-49 201.4 244 52.0
Manes.14G054500 Manihot esculenta HOM05D005518 ORTHO05D001269 1.6e-48 198.0 226 55.8
ClCG03G003580 Citrullus lanatus HOM05D005518 ORTHO05D001269 4.7e-48 196.4 257 50.6
CsaV3_1G009430 Cucumis sativus L. HOM05D005518 ORTHO05D001269 6.2e-48 196.1 259 51.7
MD06G1148700 Malus domestica HOM05D005518 ORTHO05D001269 6.2e-48 196.1 246 51.6
Rhsim12G0172400 Rhododendron simsii HOM05D005518 ORTHO05D001269 2.3e-47 194.1 268 49.6
TAR626G1948 Trochodendron aralioides HOM05D005518 ORTHO05D001269 2.0e-46 191.0 268 51.5
Ciclev10019441m.g Citrus clementina HOM05D005518 ORTHO05D001269 2.6e-46 190.7 259 50.2
CSS0041106 Camellia sinensis var. sinensis HOM05D005518 ORTHO05D001269 9.8e-46 188.7 262 51.9
MELO3C002344.2 Cucumis melo HOM05D005518 ORTHO05D001269 1.4e-44 184.9 260 48.8
Sed0015656 Sechium edule HOM05D005518 ORTHO05D001269 1.4e-44 184.9 259 46.7
PGSC0003DMG400015252 Solanum tuberosum HOM05D005518 ORTHO05D001269 1.9e-44 184.5 265 49.8
Sed0017473 Sechium edule HOM05D005518 ORTHO05D001269 3.2e-44 183.7 256 48.4
vmacro16655 Vaccinium macrocarpon HOM05D005518 ORTHO05D001269 9.2e-44 182.2 278 47.5
Actinidia36793 Actinidia chinensis HOM05D005518 ORTHO05D001269 2.7e-43 180.6 259 50.6
Nitab4.5_0005327g0060 Nicotiana tabacum HOM05D005518 ORTHO05D001269 4.6e-43 179.9 282 46.5
Glyma.04G193600 Glycine max HOM05D005518 ORTHO05D001269 7.8e-43 179.1 234 52.6
Glyma.06G172500 Glycine max HOM05D005518 ORTHO05D001269 1.3e-42 178.3 237 51.9
Sopen03g030200 Solanum pennellii HOM05D005518 ORTHO05D001269 3.0e-42 177.2 261 48.7
Solyc03g111030.3 Solanum lycopersicum HOM05D005518 ORTHO05D001269 1.5e-41 174.9 261 48.3
Nitab4.5_0001664g0120 Nicotiana tabacum HOM05D005518 ORTHO05D001269 1.9e-41 174.5 257 49.0
CDE06G2288 Ceratophyllum demersum HOM05D005518 ORTHO05D005913 2.5e-41 174.1 254 46.5
Nn1g07622 Nelumbo nucifera HOM05D005518 ORTHO05D001269 3.3e-41 173.7 283 47.7
Lj9A476T55 Lonicera japonica HOM05D005518 ORTHO05D001269 2.1e-40 171.0 265 46.4
Lalb_Chr08g0237001 Lupinus albus HOM05D005518 ORTHO05D001269 2.1e-40 171.0 255 48.2
Lalb_Chr11g0069691 Lupinus albus HOM05D005518 ORTHO05D001269 2.8e-40 170.6 244 50.8
TWI23G0187 Tripterygium wilfordii HOM05D005518 ORTHO05D001269 4.7e-40 169.9 287 45.6
Dinv11102 Davidia involucrata HOM05D005518 ORTHO05D001269 1.1e-39 168.7 263 49.4
MSTRG.9316 Avicennia marina HOM05D005518 ORTHO05D001269 1.4e-39 168.3 265 47.2
Lj1g0006481 Lotus japonicus HOM05D005518 ORTHO05D001269 1.4e-39 168.3 245 49.4
THA.LOC104825006 Tarenaya hassleriana HOM05D005518 ORTHO05D001269 8.9e-39 165.6 282 44.3
Psat5g139920 Pisum sativum HOM05D005518 ORTHO05D001269 1.7e-37 161.4 232 47.8
CAN.G352.49 Capsicum annuum HOM05D005518 ORTHO05D001269 2.9e-37 160.6 261 46.7
Migut.D01234 Erythranthe guttata HOM05D005518 ORTHO05D001269 3.7e-37 160.2 283 43.5
DCAR_007472 Daucus carota HOM05D005518 ORTHO05D001269 6.4e-37 159.5 273 42.5
SGA_v2.0_scaffold37G14614 Striga asiatica HOM05D005518 ORTHO05D001269 6.4e-37 159.5 268 44.4
AT5G50350 Arabidopsis thaliana HOM05D005518 ORTHO05D001269 1.1e-36 158.7 306 42.8
TPR.G26139 Trifolium pratense HOM05D005518 ORTHO05D001269 1.1e-36 158.7 251 45.8
CARHR258130 Cardamine hirsuta HOM05D005518 ORTHO05D001269 1.4e-36 158.3 298 42.6
AL8G24460 Arabidopsis lyrata HOM05D005518 ORTHO05D001269 2.4e-36 157.5 315 39.0
CSS0031701 Camellia sinensis var. sinensis HOM05D005518 ORTHO05D001269 4.1e-36 156.8 261 48.7
HanXRQChr02g0035181 Helianthus annuus HOM05D005518 ORTHO05D001269 4.6e-35 153.3 273 42.1
arahy.Tifrunner.gnm1.ann1.QFFJ7D Arachis hypogaea HOM05D005518 ORTHO05D001269 2.5e-33 147.5 238 47.1
arahy.Tifrunner.gnm1.ann1.P5I184 Arachis hypogaea HOM05D001134 ORTHO05D001269 5.6e-33 146.4 236 47.0
MSTRG.22916 Avicennia marina HOM05D005518 ORTHO05D001269 5.6e-33 146.4 257 44.4
PSO782G5170 Papaver somniferum HOM05D005518 ORTHO05D001269 5.6e-33 146.4 287 43.6
Thhalv10013029m.g Eutrema salsugineum HOM05D005518 ORTHO05D001269 2.1e-32 144.4 313 40.3
Lsat_1_v5_gn_1_29580 Lactuca sativa HOM05D005518 ORTHO05D001269 2.8e-32 144.1 304 39.1
A03p27800 Brassica napus HOM05D005518 ORTHO05D001269 6.2e-32 142.9 303 39.6
AUR62029840 Chenopodium quinoa HOM05D005518 ORTHO05D001269 1.1e-31 142.1 225 45.3
MBI14_g12740_MAGBIO Magnolia biondii HOM05D005518 ORTHO05D001269 1.8e-31 141.4 301 39.2
AUR62025869 Chenopodium quinoa HOM05D005518 ORTHO05D001269 6.8e-31 139.4 231 44.2
Phvul.009G168300 Phaseolus vulgaris HOM05D005518 ORTHO05D001269 1.2e-30 138.7 263 40.7
Sp6g12480 Schrenkiella parvula HOM05D005518 ORTHO05D001269 1.5e-30 138.3 310 38.4
THA.LOC104803143 Tarenaya hassleriana HOM05D005518 ORTHO05D001269 2.0e-30 137.9 342 37.4
Peaxi162Scf00089g00324 Petunia axillaris HOM05D005518 ORTHO05D001269 2.6e-30 137.5 277 38.6
Medtr3g075070 Medicago truncatula HOM05D005518 ORTHO05D001269 3.4e-30 137.1 255 43.1
vmacro16712 Vaccinium macrocarpon HOM05D005518 ORTHO05D001269 3.4e-30 137.1 201 49.8
BcaB01g02898 Brassica carinata HOM05D004180 ORTHO05D001269 5.8e-30 136.3 311 36.7
Actinidia25603 Actinidia chinensis HOM05D005518 ORTHO05D001269 1.7e-29 134.8 255 43.1
HanXRQChr04g0100301 Helianthus annuus HOM05D005518 ORTHO05D001269 1.1e-28 132.1 333 35.1
Aa31LG3G5820 Aethionema arabicum HOM05D005518 ORTHO05D001269 1.9e-28 131.3 339 36.9
BraA03t11991Z Brassica rapa HOM05D005518 ORTHO05D001269 3.2e-28 130.6 303 38.3
Sc04g0000850 Simmondsia chinensis HOM05D005518 ORTHO05D001269 9.2e-28 129.0 247 44.5
HPP92_027039 Vanilla planifolia HOM05D005518 ORTHO05D001269 1.2e-27 128.6 258 39.5
Actinidia08857 Actinidia chinensis HOM05D005518 ORTHO05D001269 1.6e-27 128.3 250 44.4
Lj5C99T12 Lonicera japonica HOM05D005518 ORTHO05D001269 1.6e-27 128.3 270 41.5
BolC3t15674H Brassica oleracea HOM05D005518 ORTHO05D001269 2.7e-27 127.5 306 37.9
Hund02416 Selenicereus undatus HOM05D005518 ORTHO05D001269 3.5e-27 127.1 248 39.5
EL10As4g23466 Beta vulgaris HOM05D005518 ORTHO05D001269 4.6e-27 126.7 220 45.0
BcaC01g04812 Brassica carinata HOM05D005518 ORTHO05D001269 4.6e-27 126.7 307 36.5
C03p33530 Brassica napus HOM05D005518 ORTHO05D001269 4.6e-27 126.7 306 37.3
Oeu055998.1 Olea europaea HOM05D005518 ORTHO05D001269 6.0e-27 126.3 266 41.0
Carub.0008s1043 Capsella rubella HOM05D005518 ORTHO05D001269 1.7e-26 124.8 331 33.2
CDE03G0480 Ceratophyllum demersum HOM05D005518 ORTHO05D001269 5.1e-26 123.2 254 39.8
ECA247G0960 Erigeron canadensis HOM05D005518 ORTHO05D001269 7.3e-25 119.4 326 35.9
ATR0751G048 Amborella trichopoda HOM05D005518 ORTHO05D001269 9.6e-25 119.0 317 35.6
SalBow1G4741 Salvia bowleyana HOM05D005518 ORTHO05D001269 6.2e-24 116.3 310 37.1
Cc04_g10180 Coffea canephora HOM05D005518 ORTHO05D001269 3.8e-21 107.1 301 34.6
Ca_16087_v3 Cicer arietinum L. HOM05D005518 ORTHO05D001269 1.9e-20 104.8 145 50.3
PSO063G3591 Papaver somniferum HOM05D005518 ORTHO05D001269 3.2e-20 104.0 253 38.3
Aqoxy4G02270 Aquilegia oxysepala HOM05D005518 ORTHO05D001269 2.3e-18 97.8 276 34.4
VMungo1309G2768 Vigna mungo HOM05D005518 ORTHO05D001269 2.5e-17 94.4 223 36.3
Zm00001eb388520 Zea mays HOM05D005518 ORTHO05D001269 5.8e-14 83.2 282 31.2
Cfa018874 Carpinus fangiana HOM05D005518 ORTHO05D001269 2.4e-12 77.8 87 51.7
Os06g0609800 Oryza sativa ssp. japonica HOM05D005518 ORTHO05D001269 5.4e-12 76.6 242 32.6
SEGI_40207 Sequoiadendron giganteum HOM05D005518 ORTHO05D001269 6.7e-10 69.7 261 33.3
Sc22g0004140 Simmondsia chinensis HOM05D005518 ORTHO05D001269 1.9e-09 68.2 86 51.2
Migut.I00490 Erythranthe guttata HOM05D005518 ORTHO05D001269 1.3e-08 65.5 208 34.6
unitig_22.g5764 Utricularia gibba HOM05D005518 ORTHO05D001269 5.8e-06 56.6 184 32.6
Sc22g0004150 Simmondsia chinensis HOM05D005518 ORTHO05D001269 7.6e-06 56.2 87 44.8


User provided reference genes

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