Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib068G1330 Durio zibethinus HOM05D003381 ORTHO05D003880 5.9e-40 167.5 116 100.0
Duzib084G1005 Durio zibethinus HOM05D003381 ORTHO05D003880 6.8e-20 100.9 96 79.2
Duzib205G0505 Durio zibethinus HOM05D003381 ORTHO05D003880 3.1e-17 92.0 96 84.4
Thecc.03G212300 Theobroma cacao HOM05D003381 ORTHO05D003880 7.0e-17 90.9 99 82.8
Gohir.A08G106600 Gossypium hirsutum HOM05D003381 ORTHO05D003880 1.1e-14 83.6 106 62.3
Gohir.D08G117850 Gossypium hirsutum HOM05D003381 ORTHO05D003880 1.1e-14 83.6 106 66.0
Gorai.004G126400 Gossypium raimondii HOM05D003381 ORTHO05D003880 1.1e-14 83.6 106 66.0
Gohir.D08G117900 Gossypium hirsutum HOM05D003381 ORTHO05D003880 2.5e-14 82.4 106 64.2
Gorai.004G126500 Gossypium raimondii HOM05D003381 ORTHO05D003880 2.5e-14 82.4 106 64.2
COL.COLO4_14401 Corchorus olitorius HOM05D003381 ORTHO05D003880 7.2e-14 80.9 101 68.3
Gohir.A08G106800 Gossypium hirsutum HOM05D003381 ORTHO05D003880 9.4e-14 80.5 106 64.2
Thecc.03G212200 Theobroma cacao HOM05D003381 ORTHO05D003880 1.8e-12 76.3 106 72.6
Hma1.2p1_0115F.1_g055840 Hydrangea macrophylla HOM05D003381 ORTHO05D003880 9.8e-11 70.5 89 50.6
QL09p005975 Quercus lobata HOM05D003381 ORTHO05D003880 9.8e-11 70.5 112 58.9
Ciclev10022951m.g Citrus clementina HOM05D003381 ORTHO05D003880 2.8e-10 68.9 106 46.2
HanXRQChr08g0225881 Helianthus annuus HOM05D003381 ORTHO05D003880 3.1e-09 65.5 99 51.5
Sabra15G0000300 Salix brachista HOM05D003381 ORTHO05D003880 3.1e-09 65.5 95 45.3
Atru.chr12.2499 Acer truncatum HOM05D003381 ORTHO05D003880 5.4e-09 64.7 81 49.4
Atru.chr12.2523 Acer truncatum HOM05D003381 ORTHO05D003880 5.4e-09 64.7 81 49.4
vmacro06477 Vaccinium macrocarpon HOM05D003381 ORTHO05D003880 5.4e-09 64.7 104 67.3
CSS0002942 Camellia sinensis var. sinensis HOM05D003381 ORTHO05D003880 1.6e-08 63.2 99 56.6
Peaxi162Scf00007g00254 Petunia axillaris HOM05D003381 ORTHO05D003880 2.0e-08 62.8 105 41.9
TWI81G0266 Tripterygium wilfordii HOM05D003381 ORTHO05D003880 2.0e-08 62.8 82 47.6
vmacro06476 Vaccinium macrocarpon HOM05D003381 ORTHO05D003880 2.7e-08 62.4 88 55.7
SalBow4G2332 Salvia bowleyana HOM05D003381 ORTHO05D003880 3.5e-08 62.0 95 42.1
VMungo1309G1451 Vigna mungo HOM05D003381 ORTHO05D003880 4.5e-08 61.6 79 67.1
HanXRQChr08g0225861 Helianthus annuus HOM05D003381 ORTHO05D003880 5.9e-08 61.2 102 44.1
Psat5g070520 Pisum sativum HOM05D003381 ORTHO05D003880 5.9e-08 61.2 79 55.7
Phvul.009G040500 Phaseolus vulgaris HOM05D003381 ORTHO05D003880 7.7e-08 60.8 79 46.8
Sabra12G0000400 Salix brachista HOM05D003381 ORTHO05D003880 7.7e-08 60.8 94 45.7
Glyma.04G225500 Glycine max HOM05D003381 ORTHO05D003880 1.0e-07 60.5 104 54.8
Glyma.06G139300 Glycine max HOM05D003381 ORTHO05D003880 1.0e-07 60.5 103 52.4
Nitab4.5_0007121g0010 Nicotiana tabacum HOM05D003381 ORTHO05D003880 1.0e-07 60.5 80 61.2
Sopen03g027520 Solanum pennellii HOM05D003381 ORTHO05D003880 1.0e-07 60.5 103 48.5
TAR374G1397 Trochodendron aralioides HOM05D003381 ORTHO05D003880 1.0e-07 60.5 96 43.8
Sopen03g027500 Solanum pennellii HOM05D003381 ORTHO05D003880 1.3e-07 60.1 104 50.0
PGSC0003DMG400000546 Solanum tuberosum HOM05D003381 ORTHO05D003880 1.3e-07 60.1 104 53.8
Actinidia34289 Actinidia chinensis HOM05D003381 ORTHO05D003880 1.7e-07 59.7 104 51.0
Oeu063749.1 Olea europaea HOM05D003381 ORTHO05D003880 1.7e-07 59.7 80 60.0
Solyc03g096780.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 1.7e-07 59.7 103 48.5
PGSC0003DMG400000545 Solanum tuberosum HOM05D003381 ORTHO05D003880 1.7e-07 59.7 103 50.5
TPR.G35911 Trifolium pratense HOM05D003381 ORTHO05D003880 1.7e-07 59.7 79 46.8
Dinv17275 Davidia involucrata HOM05D003381 ORTHO05D003880 2.3e-07 59.3 107 43.0
Lj1g0021256 Lotus japonicus HOM05D003381 ORTHO05D003880 2.3e-07 59.3 92 44.6
Lalb_Chr08g0239391 Lupinus albus HOM05D003381 ORTHO05D003880 2.3e-07 59.3 106 40.6
Manes.01G002300 Manihot esculenta HOM05D003381 ORTHO05D003880 2.3e-07 59.3 84 45.2
Oeu017357.1 Olea europaea HOM05D003381 ORTHO05D003880 2.3e-07 59.3 98 55.1
HanXRQChr08g0225771 Helianthus annuus HOM05D003381 ORTHO05D003880 2.9e-07 58.9 81 53.1
HanXRQChr08g0225851 Helianthus annuus HOM05D003381 ORTHO05D003880 2.9e-07 58.9 81 53.1
Nitab4.5_0000115g0190 Nicotiana tabacum HOM05D003381 ORTHO05D003880 2.9e-07 58.9 98 52.0
Potri.015G000500 Populus trichocarpa HOM05D003381 ORTHO05D003880 2.9e-07 58.9 84 45.2
Nitab4.5_0002867g0010 Nicotiana tabacum HOM05D003381 ORTHO05D003880 3.8e-07 58.5 104 55.8
Potri.012G004500 Populus trichocarpa HOM05D003381 ORTHO05D003880 3.8e-07 58.5 92 44.6
Prupe.2G322300 Prunus persica HOM05D003381 ORTHO05D003880 3.8e-07 58.5 81 46.9
RcHm_v2.0_Chr1g0383321 Rosa chinensis HOM05D003381 ORTHO05D003880 3.8e-07 58.5 81 43.2
PGSC0003DMG400027025 Solanum tuberosum HOM05D003381 ORTHO05D003880 5.0e-07 58.2 104 43.3
AUR62028119 Chenopodium quinoa HOM05D003381 ORTHO05D003880 6.6e-07 57.8 104 51.0
Migut.F00121 Erythranthe guttata HOM05D003381 ORTHO05D003880 6.6e-07 57.8 98 39.8
Peaxi162Scf00815g00116 Petunia axillaris HOM05D003381 ORTHO05D003880 6.6e-07 57.8 80 58.8
SGA_v2.0_scaffold44G16873 Striga asiatica HOM05D003381 ORTHO05D003880 6.6e-07 57.8 94 43.6
CANSAT21G1431 Cannabis sativa HOM05D003381 ORTHO05D003880 8.6e-07 57.4 76 44.7
Haze_00337 Corylus avellana HOM05D003381 ORTHO05D003880 8.6e-07 57.4 78 56.4
Nitab4.5_0002691g0070 Nicotiana tabacum HOM05D003381 ORTHO05D003880 8.6e-07 57.4 103 47.6
MSTRG.26951 Avicennia marina HOM05D003381 ORTHO05D003880 1.1e-06 57.0 95 40.0
CAN.G303.62 Capsicum annuum HOM05D003381 ORTHO05D003880 1.1e-06 57.0 101 41.6
Ca_16840_v3 Cicer arietinum L. HOM05D003381 ORTHO05D003880 1.1e-06 57.0 101 40.6
Lalb_Chr10g0102971 Lupinus albus HOM05D003381 ORTHO05D003880 1.1e-06 57.0 75 42.7
Medtr3g093400 Medicago truncatula HOM05D003381 ORTHO05D003880 1.1e-06 57.0 102 44.1
Nitab4.5_0002691g0080 Nicotiana tabacum HOM05D003381 ORTHO05D003880 1.1e-06 57.0 103 49.5
Solyc03g096770.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 1.5e-06 56.6 104 50.0
Sopen03g027490 Solanum pennellii HOM05D003381 ORTHO05D003880 1.5e-06 56.6 98 40.8
TWI81G0192 Tripterygium wilfordii HOM05D003381 ORTHO05D003880 1.5e-06 56.6 76 46.1
TAR375G0964 Trochodendron aralioides HOM05D003381 ORTHO05D003880 1.5e-06 56.6 98 41.8
FAN10G2693 Fragaria x ananassa HOM05D003381 ORTHO05D003880 1.9e-06 56.2 81 40.7
FAN10G4285 Fragaria x ananassa HOM05D003381 ORTHO05D003880 1.9e-06 56.2 81 40.7
MBI12_g33141_MAGBIO Magnolia biondii HOM05D003381 ORTHO05D003880 1.9e-06 56.2 78 78.2
Solyc03g096760.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 1.9e-06 56.2 98 40.8
Dinv29190 Davidia involucrata HOM05D003381 ORTHO05D003880 2.5e-06 55.8 110 39.1
Lalb_Chr11g0067571 Lupinus albus HOM05D003381 ORTHO05D003880 2.5e-06 55.8 77 42.9
Cc02_g00580 Coffea canephora HOM05D003381 ORTHO05D003880 3.3e-06 55.5 103 37.9
COL.COLO4_14402 Corchorus olitorius HOM05D003381 ORTHO05D003880 3.3e-06 55.5 34 79.4
Phvul.008G187900 Phaseolus vulgaris HOM05D003381 ORTHO05D003880 3.3e-06 55.5 77 42.9
THA.LOC104798994 Tarenaya hassleriana HOM05D003381 ORTHO05D003880 3.3e-06 55.5 78 46.2
ECA233G1855 Erigeron canadensis HOM05D003381 ORTHO05D003880 4.2e-06 55.1 102 46.1
FAN03G2343 Fragaria x ananassa HOM05D003381 ORTHO05D003880 4.2e-06 55.1 81 39.5
Peaxi162Scf01650g00008 Petunia axillaris HOM05D003381 ORTHO05D003880 4.2e-06 55.1 105 60.0
Solyc06g072990.1 Solanum lycopersicum HOM05D003381 ORTHO05D003880 4.2e-06 55.1 106 51.9
Sopen06g029340 Solanum pennellii HOM05D003381 ORTHO05D003880 4.2e-06 55.1 106 42.5
AUR62005946 Chenopodium quinoa HOM05D003381 ORTHO05D003880 5.5e-06 54.7 74 43.2
FvH4_7g33340 Fragaria vesca HOM05D003381 ORTHO05D003880 7.2e-06 54.3 81 48.1
PGSC0003DMG400000547 Solanum tuberosum HOM05D003381 ORTHO05D003880 7.2e-06 54.3 98 46.9
CSS0005275 Camellia sinensis var. sinensis HOM05D003381 ORTHO05D003880 9.5e-06 53.9 111 37.8
MBI12_g23072_MAGBIO Magnolia biondii HOM05D003381 ORTHO05D003880 9.5e-06 53.9 78 75.6
QL11p009417 Quercus lobata HOM05D003381 ORTHO05D003880 9.5e-06 53.9 87 59.8


User provided reference genes

Program Settings