Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib068G1260 Durio zibethinus HOM05D001931 ORTHO05D001891 1.9e-40 168.7 84 100.0
COL.COLO4_17124 Corchorus olitorius HOM05D001931 ORTHO05D001891 5.6e-24 114.0 83 68.7
Gorai.004G189600 Gossypium raimondii HOM05D001931 ORTHO05D001891 8.1e-23 110.2 85 67.1
Gohir.D08G180732 Gossypium hirsutum HOM05D001931 ORTHO05D001891 3.1e-22 108.2 85 65.9
Gohir.A08G160400 Gossypium hirsutum HOM05D001931 ORTHO05D001891 9.9e-21 103.2 85 63.5
MELO3C003366.2 Cucumis melo HOM05D001931 ORTHO05D001891 3.1e-14 81.6 101 48.5
Glyma.11G040300 Glycine max HOM05D001931 ORTHO05D001891 8.9e-14 80.1 88 52.3
Prupe.5G049000 Prunus persica HOM05D001931 ORTHO05D001891 4.4e-13 77.8 84 52.4
Sc07g0008960 Simmondsia chinensis HOM05D001931 ORTHO05D001891 2.2e-12 75.5 80 51.2
Solyc08g077410.4 Solanum lycopersicum HOM05D001931 ORTHO05D001891 3.8e-12 74.7 43 81.4
Sopen08g026000 Solanum pennellii HOM05D001931 ORTHO05D001891 3.8e-12 74.7 43 81.4
arahy.Tifrunner.gnm1.ann1.T7XISY Arachis hypogaea HOM05D001931 ORTHO05D001891 6.4e-12 73.9 77 53.2
arahy.Tifrunner.gnm1.ann1.TXEI0G Arachis hypogaea HOM05D001931 ORTHO05D001891 6.4e-12 73.9 77 53.2
ClCG09G012420 Citrullus lanatus HOM05D001931 ORTHO05D001891 8.4e-12 73.6 47 74.5
VMungo1215G0653 Vigna mungo HOM05D001931 ORTHO05D001891 8.4e-12 73.6 83 50.6
TWI81G0442 Tripterygium wilfordii HOM05D001931 ORTHO05D001891 1.4e-11 72.8 80 52.5
HanXRQChr15g0493311 Helianthus annuus HOM05D001931 ORTHO05D001891 3.2e-11 71.6 81 46.9
Phvul.002G003400 Phaseolus vulgaris HOM05D001931 ORTHO05D001891 1.2e-10 69.7 78 51.3
Actinidia25935 Actinidia chinensis HOM05D001931 ORTHO05D001891 2.1e-10 68.9 86 47.7
Aa31LG2G13260 Aethionema arabicum HOM05D001931 ORTHO05D001891 2.7e-10 68.6 83 49.4
A08p09120 Brassica napus HOM05D001931 ORTHO05D001891 2.7e-10 68.6 85 45.9
Sp1g28250 Schrenkiella parvula HOM05D001931 ORTHO05D001891 3.5e-10 68.2 85 48.2
BraA08t32914Z Brassica rapa HOM05D001931 ORTHO05D001891 6.0e-10 67.4 85 45.9
BcaB04g17963 Brassica carinata HOM05D001931 ORTHO05D001891 7.8e-10 67.0 85 45.9
AL1G46970 Arabidopsis lyrata HOM05D001931 ORTHO05D001891 1.3e-09 66.2 88 45.5
AT1G32710 Arabidopsis thaliana HOM05D001931 ORTHO05D001891 1.7e-09 65.9 85 47.1
Carub.0001s3105 Capsella rubella HOM05D001931 ORTHO05D001891 1.7e-09 65.9 88 46.6
FAN13G2157 Fragaria x ananassa HOM05D001931 ORTHO05D001891 1.7e-09 65.9 84 48.8
Sed0007326 Sechium edule HOM05D001931 ORTHO05D001891 1.7e-09 65.9 40 75.0
GSVIVG01013246001 Vitis vinifera HOM05D001931 ORTHO05D001891 2.3e-09 65.5 72 54.2
BolC8t47957H Brassica oleracea HOM05D001931 ORTHO05D001891 3.9e-09 64.7 85 44.7
Thhalv10009443m.g Eutrema salsugineum HOM05D001931 ORTHO05D001891 5.1e-09 64.3 83 47.0
PSO541G4211 Papaver somniferum HOM05D001931 ORTHO05D001891 6.6e-09 63.9 83 45.8
CsaV3_3G049600 Cucumis sativus L. HOM05D001931 ORTHO05D001891 8.7e-09 63.5 47 66.0
PSO675G1583 Papaver somniferum HOM05D001931 ORTHO05D001891 8.7e-09 63.5 83 45.8
PSO541G4670 Papaver somniferum HOM05D001931 ORTHO05D001891 1.9e-08 62.4 83 44.6
Medtr5g013865 Medicago truncatula HOM05D001931 ORTHO05D001891 4.3e-08 61.2 86 43.0
Cc08_g01750 Coffea canephora HOM05D001931 ORTHO05D001891 3.6e-07 58.2 88 45.5
CARHR032100 Cardamine hirsuta HOM05D001931 ORTHO05D001891 4.7e-07 57.8 83 43.4
MBI01_g34163_MAGBIO Magnolia biondii HOM05D001931 ORTHO05D001891 6.2e-07 57.4 78 42.3


User provided reference genes

Program Settings