Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib068G1011 Durio zibethinus HOM05D005805 ORTHO05D007226 2.5e-171 605.5 341 100.0
Duzib084G0260 Durio zibethinus HOM05D005805 ORTHO05D007226 2.3e-124 449.5 433 61.2
Duzib205G1286 Durio zibethinus HOM05D005805 ORTHO05D007226 3.9e-124 448.7 427 62.3
Gohir.D03G155100 Gossypium hirsutum HOM05D005805 ORTHO05D007226 7.3e-123 444.5 445 60.7
Gorai.003G162800 Gossypium raimondii HOM05D005805 ORTHO05D007226 7.3e-123 444.5 445 60.4
Gohir.A03G015238 Gossypium hirsutum HOM05D005805 ORTHO05D007226 4.7e-122 441.8 436 61.7
Thecc.03G270600 Theobroma cacao HOM05D005805 ORTHO05D007226 3.4e-120 435.6 425 61.9
Gorai.004G207600 Gossypium raimondii HOM05D005805 ORTHO05D007226 3.6e-114 415.6 397 60.7
GSVIVG01019866001 Vitis vinifera HOM05D005805 ORTHO05D007226 1.0e-108 397.5 344 61.6
CSS0012055 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 1.3e-108 397.1 344 61.6
Actinidia02051 Actinidia chinensis HOM05D005805 ORTHO05D007226 1.7e-108 396.7 343 61.2
Sed0020250 Sechium edule HOM05D005805 ORTHO05D007226 3.9e-108 395.6 350 60.6
Actinidia14511 Actinidia chinensis HOM05D005805 ORTHO05D007226 4.3e-107 392.1 344 60.5
VMungo1215G3124 Vigna mungo HOM05D005805 ORTHO05D007226 9.6e-107 391.0 346 60.7
CSS0001301 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 4.8e-106 388.7 347 61.1
Glyma.01G215800 Glycine max HOM05D005805 ORTHO05D007226 1.1e-105 387.5 356 66.0
Gohir.A08G178400 Gossypium hirsutum HOM05D005805 ORTHO05D007226 1.1e-105 387.5 465 52.9
Glyma.11G026600 Glycine max HOM05D005805 ORTHO05D007226 2.4e-105 386.3 356 63.2
Ca_06662_v3 Cicer arietinum L. HOM05D005805 ORTHO05D007226 9.9e-104 380.9 347 58.8
ClCG01G003160 Citrullus lanatus HOM05D005805 ORTHO05D007226 1.7e-103 380.2 389 55.0
Lalb_Chr16g0379971 Lupinus albus HOM05D005805 ORTHO05D007226 8.4e-103 377.9 344 58.7
TAR375G0540 Trochodendron aralioides HOM05D005805 ORTHO05D007226 1.1e-102 377.5 345 57.1
Eucgr.D01927 Eucalyptus grandis HOM05D005805 ORTHO05D007226 3.2e-102 375.9 387 54.8
Potri.001G111100 Populus trichocarpa HOM05D005805 ORTHO05D007226 7.1e-102 374.8 464 54.1
QL12p017075 Quercus lobata HOM05D005805 ORTHO05D007226 7.1e-102 374.8 447 53.9
TAR629G3121 Trochodendron aralioides HOM05D005805 ORTHO05D007226 7.1e-102 374.8 345 58.8
Dinv39015 Davidia involucrata HOM05D005805 ORTHO05D007226 1.2e-101 374.0 316 62.3
Hma1.2p1_0371F.1_g138200 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 1.6e-101 373.6 339 59.6
Lsat_1_v5_gn_6_12941 Lactuca sativa HOM05D005805 ORTHO05D007226 1.8e-100 370.2 344 57.6
Lalb_Chr05g0214771 Lupinus albus HOM05D005805 ORTHO05D007226 2.3e-100 369.8 346 57.8
CiPaw.11G141700 Carya illinoinensis HOM05D005805 ORTHO05D007226 3.9e-100 369.0 448 49.1
vmacro00648 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 5.1e-100 368.6 328 60.1
Ciclev10020090m.g Citrus clementina HOM05D005805 ORTHO05D007226 7.4e-99 364.8 457 51.0
MELO3C005626.2 Cucumis melo HOM05D005805 ORTHO05D007226 1.3e-98 364.0 330 60.6
Potri.003G120900 Populus trichocarpa HOM05D005805 ORTHO05D007226 2.1e-98 363.2 475 51.6
Phvul.002G153800 Phaseolus vulgaris HOM05D005805 ORTHO05D007226 2.8e-98 362.8 317 60.9
Nitab4.5_0009882g0030 Nicotiana tabacum HOM05D005805 ORTHO05D007226 4.0e-97 359.0 371 53.9
Sopen08g028610 Solanum pennellii HOM05D005805 ORTHO05D007226 4.0e-97 359.0 350 57.4
Medtr5g010950 Medicago truncatula HOM05D005805 ORTHO05D007226 9.0e-97 357.8 354 61.9
Migut.A00918 Erythranthe guttata HOM05D005805 ORTHO05D007226 1.7e-95 353.6 387 52.2
TWI81G0996 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 8.4e-95 351.3 464 50.0
CAN.G981.40 Capsicum annuum HOM05D005805 ORTHO05D007226 1.4e-94 350.5 349 56.7
CiPaw.12G099000 Carya illinoinensis HOM05D005805 ORTHO05D007226 1.4e-94 350.5 454 49.1
Sabra01G0084700 Salix brachista HOM05D005805 ORTHO05D007226 2.5e-94 349.7 490 44.9
Psat2g181520 Pisum sativum HOM05D005805 ORTHO05D007226 7.1e-94 348.2 433 48.0
Nn1g01331 Nelumbo nucifera HOM05D005805 ORTHO05D007226 2.1e-93 346.7 344 56.1
MD06G1071900 Malus domestica HOM05D005805 ORTHO05D007226 3.0e-92 342.8 490 48.2
HanXRQChr02g0048701 Helianthus annuus HOM05D005805 ORTHO05D007226 3.9e-92 342.4 344 54.1
Cfa012095 Carpinus fangiana HOM05D005805 ORTHO05D007226 6.7e-92 341.7 478 46.4
Cc08_g13930 Coffea canephora HOM05D005805 ORTHO05D007226 6.7e-92 341.7 344 53.5
Nitab4.5_0001714g0200 Nicotiana tabacum HOM05D005805 ORTHO05D007226 2.5e-91 339.7 342 55.0
THA.LOC104806368 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 5.7e-91 338.6 417 50.4
THA.LOC104814292 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 7.4e-91 338.2 407 48.2
arahy.Tifrunner.gnm1.ann1.8FZ8QS Arachis hypogaea HOM05D005805 ORTHO05D007226 8.2e-90 334.7 410 49.8
Lj2g0007037 Lotus japonicus HOM05D005805 ORTHO05D007226 3.1e-89 332.8 471 44.8
PGSC0003DMG400022755 Solanum tuberosum HOM05D005805 ORTHO05D007226 4.1e-89 332.4 320 56.2
Oeu031590.1 Olea europaea HOM05D005805 ORTHO05D007226 9.0e-89 331.3 373 51.2
MD04G1068600 Malus domestica HOM05D005805 ORTHO05D007226 1.2e-88 330.9 491 48.3
Peaxi162Scf00620g00920 Petunia axillaris HOM05D005805 ORTHO05D007226 2.0e-88 330.1 374 50.3
Prupe.5G089600 Prunus persica HOM05D005805 ORTHO05D007226 4.5e-88 328.9 507 46.0
Solyc08g080260.4 Solanum lycopersicum HOM05D005805 ORTHO05D007226 4.5e-88 328.9 357 53.8
Manes.01G068001 Manihot esculenta HOM05D005805 ORTHO05D007226 5.9e-88 328.6 420 49.5
TPR.G6662 Trifolium pratense HOM05D005805 ORTHO05D007226 5.9e-88 328.6 438 47.7
PGR031G2899 Punica granatum HOM05D005805 ORTHO05D007226 3.6e-85 319.3 429 47.1
Aqoxy7G00467 Aquilegia oxysepala HOM05D005805 ORTHO05D007226 7.9e-85 318.2 303 56.8
TWI60G0251 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 7.9e-85 318.2 476 44.3
A02p25990 Brassica napus HOM05D005805 ORTHO05D007226 2.3e-84 316.6 367 56.4
BraA02t07597Z Brassica rapa HOM05D005805 ORTHO05D007226 2.3e-84 316.6 367 56.4
CsaV3_5G003280 Cucumis sativus L. HOM05D005805 ORTHO05D007226 3.0e-84 316.2 279 59.5
Thhalv10028709m.g Eutrema salsugineum HOM05D005805 ORTHO05D007226 1.1e-83 314.3 400 49.2
CANSAT21G1670 Cannabis sativa HOM05D005805 ORTHO05D007226 4.3e-83 312.4 517 43.3
Aa31LG9G10640 Aethionema arabicum HOM05D005805 ORTHO05D007226 9.7e-83 311.2 400 48.2
Lj2A197T60 Lonicera japonica HOM05D005805 ORTHO05D007226 2.2e-82 310.1 345 51.6
FvH4_5g01420 Fragaria vesca HOM05D005805 ORTHO05D007226 3.7e-82 309.3 486 43.8
FAN13G0947 Fragaria x ananassa HOM05D005805 ORTHO05D007226 4.8e-82 308.9 478 44.1
FAN18G3929 Fragaria x ananassa HOM05D005805 ORTHO05D007226 8.2e-82 308.1 486 43.8
Sed0020925 Sechium edule HOM05D005805 ORTHO05D007226 2.4e-81 306.6 281 57.7
FAN04G0223 Fragaria x ananassa HOM05D005805 ORTHO05D007226 3.1e-81 306.2 487 44.8
FAN08G1094 Fragaria x ananassa HOM05D005805 ORTHO05D007226 4.1e-81 305.8 496 42.9
MBI04_g40844_MAGBIO Magnolia biondii HOM05D005805 ORTHO05D007226 5.3e-81 305.4 341 50.7
BraA09t38298Z Brassica rapa HOM05D005805 ORTHO05D007226 2.6e-80 303.1 401 48.1
HanXRQChr07g0188541 Helianthus annuus HOM05D005805 ORTHO05D007226 4.5e-80 302.4 327 58.1
BcaB05g23807 Brassica carinata HOM05D005805 ORTHO05D007226 5.0e-79 298.9 391 46.8
ECA233G3280 Erigeron canadensis HOM05D005805 ORTHO05D007226 5.0e-79 298.9 427 41.9
BolC9t56310H Brassica oleracea HOM05D005805 ORTHO05D007226 1.4e-78 297.4 401 46.6
RcHm_v2.0_Chr7g0199441 Rosa chinensis HOM05D005805 ORTHO05D007226 5.5e-78 295.4 508 41.9
CARHR254520 Cardamine hirsuta HOM05D005805 ORTHO05D007226 1.2e-77 294.3 402 48.8
Sc01g0008800 Simmondsia chinensis HOM05D005805 ORTHO05D007226 2.1e-77 293.5 444 41.7
Carub.0006s3090 Capsella rubella HOM05D005805 ORTHO05D007226 7.9e-77 291.6 433 43.6
unitig_8.g3899 Utricularia gibba HOM05D005805 ORTHO05D007226 7.9e-77 291.6 339 49.6
Dinv37696 Davidia involucrata HOM05D005805 ORTHO05D007226 1.4e-76 290.8 274 56.9
A09p27320 Brassica napus HOM05D005805 ORTHO05D007226 6.7e-76 288.5 425 45.4
C09p34650 Brassica napus HOM05D005805 ORTHO05D007226 2.0e-75 287.0 425 44.0
AL6G46500 Arabidopsis lyrata HOM05D005805 ORTHO05D007226 3.3e-75 286.2 431 43.6
Haze_08957 Corylus avellana HOM05D005805 ORTHO05D007226 7.4e-75 285.0 491 41.8
Oeu001898.3 Olea europaea HOM05D005805 ORTHO05D007226 9.1e-73 278.1 352 46.3
Rhsim08G0109800 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.5e-72 277.3 323 51.1
arahy.Tifrunner.gnm1.ann1.J6ALFQ Arachis hypogaea HOM05D005805 ORTHO05D007226 1.0e-71 274.6 483 40.4
AT4G11790 Arabidopsis thaliana HOM05D005805 ORTHO05D007226 1.4e-70 270.8 449 41.6
Sp6g05660 Schrenkiella parvula HOM05D005805 ORTHO05D007226 7.2e-70 268.5 395 46.1
EL10Ac5g12722 Beta vulgaris HOM05D005805 ORTHO05D007226 1.0e-68 264.6 446 40.4
ATR0757G009 Amborella trichopoda HOM05D005805 ORTHO05D007226 8.8e-68 261.5 303 47.9
AUR62010661 Chenopodium quinoa HOM05D005805 ORTHO05D007226 5.7e-67 258.8 445 40.7
AUR62017300 Chenopodium quinoa HOM05D005805 ORTHO05D007226 1.3e-66 257.7 446 41.9
HPP92_020989 Vanilla planifolia HOM05D005805 ORTHO05D007226 2.2e-66 256.9 421 39.2
PSO478G0076 Papaver somniferum HOM05D005805 ORTHO05D007226 1.8e-65 253.8 569 32.7
BcaC03g16328 Brassica carinata HOM05D005805 ORTHO05D007226 7.0e-65 251.9 304 56.2
Manes.02G028100 Manihot esculenta HOM05D005805 ORTHO05D007226 1.3e-63 247.7 153 79.1
BcaB01g01678 Brassica carinata HOM05D005805 ORTHO05D007226 2.2e-63 246.9 352 45.5
Hund28361 Selenicereus undatus HOM05D005805 ORTHO05D007226 8.5e-63 245.0 492 39.0
Hund28365 Selenicereus undatus HOM05D005805 ORTHO05D007226 8.5e-63 245.0 492 39.0
COL.COLO4_05276 Corchorus olitorius HOM05D005805 ORTHO05D007226 3.6e-61 239.6 136 86.0
PSO782G3262 Papaver somniferum HOM05D005805 ORTHO05D007226 3.6e-61 239.6 574 31.5
Os03g0667700 Oryza sativa ssp. japonica HOM05D005805 ORTHO05D007226 1.8e-60 237.3 378 40.5
Ah.12g057730 Amaranthus hybridus HOM05D005805 ORTHO05D007226 4.4e-59 232.6 473 35.7
CDE11G0359 Ceratophyllum demersum HOM05D005805 ORTHO05D007226 7.0e-57 225.3 475 32.6
Zm00001eb073520 Zea mays HOM05D005805 ORTHO05D007226 7.0e-57 225.3 444 38.5
SalBow6G0943 Salvia bowleyana HOM05D005805 ORTHO05D007226 7.7e-56 221.9 346 42.8
C02p41470 Brassica napus HOM05D005805 ORTHO05D007226 2.9e-55 219.9 307 52.8
Cpa.g.sc29.9 Carica papaya HOM05D005805 ORTHO05D007226 2.3e-52 210.3 358 42.2
Gohir.D08G196900 Gossypium hirsutum HOM05D005805 ORTHO05D007226 2.0e-51 207.2 117 87.2
TAR374G1484 Trochodendron aralioides HOM05D005805 ORTHO05D007226 1.1e-49 201.4 147 69.4
vmacro10803 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 1.6e-48 197.6 310 43.5
Atru.chr9.1535 Acer truncatum HOM05D005805 ORTHO05D007226 3.7e-42 176.4 141 66.7
BolC2t10164H Brassica oleracea HOM05D005805 ORTHO05D007226 2.2e-34 150.6 107 67.3
Ah.02g116420 Amaranthus hybridus HOM05D005805 ORTHO05D007226 3.7e-34 149.8 440 30.7
COL.COLO4_05274 Corchorus olitorius HOM05D005805 ORTHO05D007226 1.7e-31 141.0 74 91.9
DCAR_006764 Daucus carota HOM05D005805 ORTHO05D007226 2.7e-24 117.1 143 46.9
AagrBONN_evm.TU.Sc2ySwM_344.4489 Anthoceros agrestis HOM05D005805 ORTHO05D007226 2.5e-22 110.5 393 27.2
Hma1.2p1_0002F.1_g002590 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 3.1e-20 103.6 76 64.5
SGA_v2.0_scaffold60G21020 Striga asiatica HOM05D011763 ORTHO05D014257 1.7e-15 87.8 79 51.9
SGA_v2.0_scaffold60G20821 Striga asiatica HOM05D011763 ORTHO05D014257 5.1e-15 86.3 94 50.0
CBR_g49019 Chara braunii HOM05D005805 ORTHO05D007226 4.7e-13 79.7 75 46.7


User provided reference genes

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