Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib068G0865 Durio zibethinus HOM05D006267 ORTHO05D007490 0.0e+00 1454.9 726 100.0
Thecc.03G287200 Theobroma cacao HOM05D006267 ORTHO05D007490 7.7e-255 884.0 692 69.7
Duzib084G0031 Durio zibethinus HOM05D006267 ORTHO05D007490 5.7e-242 841.3 677 68.1
COL.COLO4_08352 Corchorus olitorius HOM05D006267 ORTHO05D007490 2.4e-232 809.3 693 65.1
Duzib205G1874 Durio zibethinus HOM05D006267 ORTHO05D007490 1.6e-204 716.8 690 60.7
Gohir.D11G022800 Gossypium hirsutum HOM05D006267 ORTHO05D007490 1.6e-191 673.7 611 63.5
Gorai.007G024600 Gossypium raimondii HOM05D006267 ORTHO05D007490 3.9e-190 669.1 611 63.2
Gohir.A11G023100 Gossypium hirsutum HOM05D006267 ORTHO05D007490 6.6e-190 668.3 611 63.3
Atru.chr9.2105 Acer truncatum HOM05D006267 ORTHO05D007490 7.7e-138 495.4 683 45.4
GSVIVG01019426001 Vitis vinifera HOM05D006267 ORTHO05D007490 6.8e-126 455.7 704 44.2
Cfa012253 Carpinus fangiana HOM05D006267 ORTHO05D007490 4.8e-124 449.5 717 43.1
QL02p033236 Quercus lobata HOM05D006267 ORTHO05D007490 6.3e-124 449.1 693 43.3
Dinv37589 Davidia involucrata HOM05D006267 ORTHO05D007490 1.1e-123 448.4 711 42.5
Ciclev10019222m.g Citrus clementina HOM05D006267 ORTHO05D007490 3.2e-120 436.8 694 42.8
Manes.01G056900 Manihot esculenta HOM05D006267 ORTHO05D007490 2.0e-117 427.6 702 42.7
Dinv38895 Davidia involucrata HOM05D006267 ORTHO05D007490 4.9e-116 422.9 631 43.7
MD14G1113000 Malus domestica HOM05D006267 ORTHO05D007490 2.4e-115 420.6 703 40.4
CSS0029775 Camellia sinensis var. sinensis HOM05D006267 ORTHO05D007490 1.7e-113 414.5 702 42.3
Prupe.5G107200 Prunus persica HOM05D006267 ORTHO05D007490 9.5e-112 408.7 580 44.7
Potri.003G133100 Populus trichocarpa HOM05D006267 ORTHO05D007490 3.4e-109 400.2 642 42.7
Potri.001G098500 Populus trichocarpa HOM05D006267 ORTHO05D007490 1.2e-106 391.7 636 41.5
MD06G1092500 Malus domestica HOM05D006267 ORTHO05D007490 1.0e-105 388.7 703 37.7
Hma1.2p1_0216F.1_g091140 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 7.3e-104 382.5 630 41.7
Glyma.08G018700 Glycine max HOM05D006267 ORTHO05D007490 3.6e-103 380.2 684 39.3
Cpa.g.sc201.8 Carica papaya HOM05D006267 ORTHO05D007490 1.5e-101 374.8 691 39.8
Actinidia33723 Actinidia chinensis HOM05D006267 ORTHO05D007490 2.0e-101 374.4 640 40.8
RcHm_v2.0_Chr7g0196491 Rosa chinensis HOM05D006267 ORTHO05D007490 6.4e-100 369.4 619 40.1
Glyma.05G212200 Glycine max HOM05D006267 ORTHO05D007490 4.1e-99 366.7 683 38.5
CANSAT21G1484 Cannabis sativa HOM05D006267 ORTHO05D007490 7.0e-99 365.9 693 38.8
VMungo0251G1048 Vigna mungo HOM05D006267 ORTHO05D007490 7.0e-99 365.9 685 38.1
FAN18G3550 Fragaria x ananassa HOM05D006267 ORTHO05D007490 3.0e-97 360.5 606 40.1
FvH4_5g03290 Fragaria vesca HOM05D006267 ORTHO05D007490 8.6e-97 359.0 619 39.7
Actinidia27358 Actinidia chinensis HOM05D006267 ORTHO05D007490 1.6e-95 354.8 638 39.2
Lj4g0011337 Lotus japonicus HOM05D006267 ORTHO05D007490 1.6e-95 354.8 688 37.5
Lj2A177G41 Lonicera japonica HOM05D006267 ORTHO05D007490 2.8e-95 354.0 706 39.8
TAR629G1352 Trochodendron aralioides HOM05D006267 ORTHO05D007490 4.7e-95 353.2 692 38.4
Phvul.002G293500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 6.2e-95 352.8 685 37.4
Manes.02G016400 Manihot esculenta HOM05D006267 ORTHO05D007490 1.1e-94 352.1 538 44.2
CiPaw.12G088700 Carya illinoinensis HOM05D006267 ORTHO05D007490 2.3e-94 350.9 595 41.3
FAN04G2714 Fragaria x ananassa HOM05D006267 ORTHO05D007490 8.9e-94 349.0 603 40.1
FAN08G1104 Fragaria x ananassa HOM05D006267 ORTHO05D007490 3.4e-93 347.1 641 38.4
Sabra03G0095400 Salix brachista HOM05D006267 ORTHO05D007490 9.8e-93 345.5 631 39.6
arahy.Tifrunner.gnm1.ann1.BRCM5A Arachis hypogaea HOM05D006267 ORTHO05D007490 1.7e-92 344.7 692 38.2
ClCG07G007820 Citrullus lanatus HOM05D006267 ORTHO05D007490 1.7e-92 344.7 707 37.5
Lalb_Chr09g0333071 Lupinus albus HOM05D006267 ORTHO05D007490 8.3e-92 342.4 670 39.6
arahy.Tifrunner.gnm1.ann1.SWZD22 Arachis hypogaea HOM05D006267 ORTHO05D007490 1.1e-91 342.0 692 38.0
Sabra01G0073800 Salix brachista HOM05D006267 ORTHO05D007490 1.1e-91 342.0 655 38.6
TPR.G12935 Trifolium pratense HOM05D006267 ORTHO05D007490 1.4e-91 341.7 676 36.7
Ca_10954_v3 Cicer arietinum L. HOM05D006267 ORTHO05D007490 1.9e-91 341.3 673 37.4
FAN04G3088 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.4e-91 340.9 643 37.6
FAN13G1859 Fragaria x ananassa HOM05D006267 ORTHO05D007490 7.1e-91 339.3 716 36.2
Lalb_Chr05g0224451 Lupinus albus HOM05D006267 ORTHO05D007490 1.6e-90 338.2 677 37.5
FAN13G1356 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.1e-86 325.5 716 35.6
Medtr8g098995 Medicago truncatula HOM05D006267 ORTHO05D007490 2.9e-84 317.4 624 37.7
CsaV3_4G006140 Cucumis sativus L. HOM05D006267 ORTHO05D007490 1.9e-83 314.7 717 36.5
AUR62010761 Chenopodium quinoa HOM05D006267 ORTHO05D007490 5.4e-83 313.2 721 35.6
TAR375G0718 Trochodendron aralioides HOM05D006267 ORTHO05D007490 1.7e-81 308.1 685 36.5
EL10Ac5g12844 Beta vulgaris HOM05D006267 ORTHO05D007490 1.6e-79 301.6 706 35.4
vmacro13979 Vaccinium macrocarpon HOM05D006267 ORTHO05D007490 1.6e-79 301.6 651 36.1
Psat7g029320 Pisum sativum HOM05D006267 ORTHO05D007490 8.1e-79 299.3 646 36.7
Nn1g01698 Nelumbo nucifera HOM05D006267 ORTHO05D007490 1.4e-78 298.5 723 34.3
MELO3C016335.2 Cucumis melo HOM05D006267 ORTHO05D007490 1.2e-77 295.4 709 36.2
AUR62019762 Chenopodium quinoa HOM05D006267 ORTHO05D007490 1.1e-75 288.9 674 35.0
Sed0011828 Sechium edule HOM05D006267 ORTHO05D007490 1.1e-75 288.9 647 34.5
TAR374G1011 Trochodendron aralioides HOM05D006267 ORTHO05D007490 4.6e-74 283.5 795 33.2
Sc01g0009910 Simmondsia chinensis HOM05D006267 ORTHO05D007490 1.7e-73 281.6 693 32.8
Cc08_g15330 Coffea canephora HOM05D006267 ORTHO05D007490 1.5e-72 278.5 520 36.7
Haze_08744 Corylus avellana HOM05D006267 ORTHO05D007490 1.5e-69 268.5 706 33.7
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 2.6e-69 267.7 656 33.1
VMungo1215G1298 Vigna mungo HOM05D006267 ORTHO05D007490 6.4e-68 263.1 632 35.0
Eucgr.E00783 Eucalyptus grandis HOM05D006267 ORTHO05D007490 3.2e-67 260.8 632 34.3
PGR042G1146 Punica granatum HOM05D006267 ORTHO05D007490 3.2e-67 260.8 680 35.0
Sed0002932 Sechium edule HOM05D006267 ORTHO05D007490 3.2e-67 260.8 532 35.5
Phvul.002G160500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 3.3e-64 250.8 616 34.3
Aqoxy7G00177 Aquilegia oxysepala HOM05D006267 ORTHO05D007490 2.4e-62 244.6 652 34.5
Rhsim07G0086900 Rhododendron simsii HOM05D006267 ORTHO05D007490 4.0e-62 243.8 599 35.1
Hund11430 Selenicereus undatus HOM05D006267 ORTHO05D007490 1.2e-61 242.3 761 31.5
Lsat_1_v5_gn_3_11600 Lactuca sativa HOM05D006267 ORTHO05D007490 1.3e-60 238.8 674 32.9
Carub.0002s0075 Capsella rubella HOM05D006267 ORTHO05D007490 2.9e-60 237.7 643 33.0
ECA246G3109 Erigeron canadensis HOM05D006267 ORTHO05D007490 4.9e-60 236.9 662 32.9
THA.LOC104817764 Tarenaya hassleriana HOM05D006267 ORTHO05D007490 1.2e-58 232.3 643 34.2
Thhalv10023327m.g Eutrema salsugineum HOM05D006267 ORTHO05D007490 3.5e-58 230.7 642 33.8
Nitab4.5_0002381g0070 Nicotiana tabacum HOM05D006267 ORTHO05D007490 7.9e-58 229.6 654 33.8
AT1G64050 Arabidopsis thaliana HOM05D006267 ORTHO05D007490 1.3e-57 228.8 647 31.7
AL2G11010 Arabidopsis lyrata HOM05D006267 ORTHO05D007490 1.5e-56 225.3 649 32.4
Sp2g00660 Schrenkiella parvula HOM05D006267 ORTHO05D007490 1.5e-56 225.3 625 32.8
CARHR046900 Cardamine hirsuta HOM05D006267 ORTHO05D007490 1.9e-56 224.9 600 34.5
TWI60G1512 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 1.9e-56 224.9 454 38.3
DCAR_005575 Daucus carota HOM05D006267 ORTHO05D007490 4.3e-56 223.8 618 32.7
TWI15G0222 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 5.6e-56 223.4 445 37.8
HanXRQChr17g0533871 Helianthus annuus HOM05D006267 ORTHO05D007490 3.7e-55 220.7 684 30.8
BcaC04g22526 Brassica carinata HOM05D006267 ORTHO05D007490 4.8e-55 220.3 626 32.4
C09p18210 Brassica napus HOM05D006267 ORTHO05D007490 6.2e-55 219.9 629 32.9
BcaB07g31428 Brassica carinata HOM05D006267 ORTHO05D007490 9.0e-54 216.1 642 33.0
BolC9t54717H Brassica oleracea HOM05D006267 ORTHO05D007490 1.2e-53 215.7 629 32.6
A09p15090 Brassica napus HOM05D006267 ORTHO05D007490 1.5e-53 215.3 634 33.3
BraA09t37153Z Brassica rapa HOM05D006267 ORTHO05D007490 2.6e-53 214.5 630 33.2
MSTRG.1836 Avicennia marina HOM05D006267 ORTHO05D007490 4.2e-51 207.2 661 31.5
Peaxi162Scf00117g01519 Petunia axillaris HOM05D006267 ORTHO05D007490 2.1e-50 204.9 652 31.7
TWI81G0535 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 6.0e-50 203.4 452 34.5
MBI04_g06288_MAGBIO Magnolia biondii HOM05D006267 ORTHO05D007490 3.0e-49 201.1 337 40.9
Nitab4.5_0003366g0020 Nicotiana tabacum HOM05D006267 ORTHO05D007490 3.3e-48 197.6 647 32.3
Aa31LG2G1120 Aethionema arabicum HOM05D006267 ORTHO05D007490 5.9e-45 186.8 509 34.4
Sopen12g028680 Solanum pennellii HOM05D006267 ORTHO05D007490 2.9e-44 184.5 662 31.4
PSO063G3925 Papaver somniferum HOM05D006267 ORTHO05D007490 2.5e-43 181.4 625 31.2
SGA_v2.0_scaffold111G31467 Striga asiatica HOM05D006267 ORTHO05D007490 3.2e-43 181.0 660 30.5
PSO170G4156 Papaver somniferum HOM05D006267 ORTHO05D007490 4.2e-43 180.6 627 30.9
Solyc12g056170.2 Solanum lycopersicum HOM05D006267 ORTHO05D007490 7.2e-43 179.9 662 31.7
CiPaw.11G129100 Carya illinoinensis HOM05D006267 ORTHO05D007490 1.2e-42 179.1 194 49.5
PGSC0003DMG400004984 Solanum tuberosum HOM05D006267 ORTHO05D007490 7.9e-42 176.4 708 30.8
Migut.E01211 Erythranthe guttata HOM05D006267 ORTHO05D007490 7.4e-40 169.9 672 30.2
MSTRG.13864 Avicennia marina HOM05D006267 ORTHO05D007490 6.5e-36 156.8 616 28.9
HanXRQChr06g0166231 Helianthus annuus HOM05D006267 ORTHO05D007490 1.0e-25 122.9 250 35.6
Zm00001eb237760 Zea mays HOM05D006267 ORTHO05D007490 2.2e-20 105.1 549 26.0
HPP92_003940 Vanilla planifolia HOM05D006267 ORTHO05D007490 5.0e-20 104.0 425 28.2
ATR0188G022 Amborella trichopoda HOM05D006267 ORTHO05D007490 4.7e-18 97.4 223 31.8
SHI07081 Sapria himalayana HOM05D006267 ORTHO05D007490 1.4e-17 95.9 177 37.9
Hma1.2p1_0377F.1_g139590 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 7.0e-14 83.6 154 37.0
CDE03G0464 Ceratophyllum demersum HOM05D000575 ORTHO05D004448 3.5e-13 81.3 529 24.4
HPP92_023938 Vanilla planifolia HOM05D006267 ORTHO05D007490 5.9e-13 80.5 184 31.5
HPP92_023960 Vanilla planifolia HOM05D006267 ORTHO05D007490 1.7e-12 79.0 183 31.7
unitig_52.g17233 Utricularia gibba HOM05D006267 ORTHO05D007490 5.5e-11 73.9 444 26.6
CiPaw.11G129200 Carya illinoinensis HOM05D006267 ORTHO05D007490 1.2e-10 72.8 80 48.8
MSTRG.11952 Avicennia marina HOM05D006267 ORTHO05D007490 8.0e-10 70.1 165 32.1
SEGI_39127 Sequoiadendron giganteum HOM05D006267 ORTHO05D007490 9.1e-06 56.6 169 27.2


User provided reference genes

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