Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib068G0682 Durio zibethinus HOM05D007590 ORTHO05D007875 5.4e-51 204.1 110 100.0
Duzib068G0902 Durio zibethinus HOM05D007590 ORTHO05D007875 2.0e-42 175.6 106 91.5
Thecc.03G298200 Theobroma cacao HOM05D007590 ORTHO05D007875 2.3e-30 135.6 114 76.3
Duzib084G0874 Durio zibethinus HOM05D007590 ORTHO05D007875 1.9e-27 125.9 112 73.2
Duzib205G1174 Durio zibethinus HOM05D007590 ORTHO05D007875 2.7e-26 122.1 115 71.3
Gohir.D12G237700 Gossypium hirsutum HOM05D007590 ORTHO05D007875 2.3e-17 92.4 105 59.0
Gohir.D12G237966 Gossypium hirsutum HOM05D007590 ORTHO05D007875 2.3e-17 92.4 105 59.0
Gorai.008G254500 Gossypium raimondii HOM05D007590 ORTHO05D007875 2.3e-17 92.4 105 59.0
COL.COLO4_10703 Corchorus olitorius HOM05D007590 ORTHO05D007875 3.0e-17 92.0 107 60.7
Gohir.A12G236500 Gossypium hirsutum HOM05D007590 ORTHO05D007875 8.7e-17 90.5 102 54.9
Gohir.D03G083700 Gossypium hirsutum HOM05D007590 ORTHO05D007875 4.7e-15 84.7 110 54.5
Gorai.003G079000 Gossypium raimondii HOM05D007590 ORTHO05D007875 1.1e-14 83.6 102 55.9
Gohir.A02G100100 Gossypium hirsutum HOM05D007590 ORTHO05D007875 1.8e-14 82.8 108 57.4
Manes.02G009900 Manihot esculenta HOM05D007590 ORTHO05D007875 1.8e-14 82.8 116 51.7
Rhsim02G0243500 Rhododendron simsii HOM05D007590 ORTHO05D007875 5.2e-14 81.3 108 48.1
CiPaw.12G082900 Carya illinoinensis HOM05D007590 ORTHO05D007875 1.5e-13 79.7 112 48.2
Potri.001G091500 Populus trichocarpa HOM05D007590 ORTHO05D007875 1.5e-13 79.7 110 50.9
Gohir.A02G100200 Gossypium hirsutum HOM05D007590 ORTHO05D007875 7.6e-13 77.4 102 51.0
TAR374G1746 Trochodendron aralioides HOM05D007590 ORTHO05D007875 1.7e-12 76.3 108 49.1
Dinv38831 Davidia involucrata HOM05D005474 ORTHO05D006551 2.9e-12 75.5 109 49.5
Manes.02G010000 Manihot esculenta HOM05D007590 ORTHO05D007875 2.9e-12 75.5 112 47.3
Potri.003G140100 Populus trichocarpa HOM05D007590 ORTHO05D007875 4.9e-12 74.7 110 49.1
Prupe.5G120200 Prunus persica HOM05D007590 ORTHO05D007875 1.1e-11 73.6 111 44.1
TAR629G1835 Trochodendron aralioides HOM05D007590 ORTHO05D007875 1.1e-11 73.6 107 46.7
Cpa.g.sc79.34 Carica papaya HOM05D007590 ORTHO05D007875 1.4e-11 73.2 115 47.0
TAR375G1006 Trochodendron aralioides HOM05D007590 ORTHO05D007875 2.4e-11 72.4 107 46.7
Hma1.2p1_1746F.1_g300410 Hydrangea macrophylla HOM05D007590 ORTHO05D007875 4.2e-11 71.6 108 42.6
Manes.01G049200 Manihot esculenta HOM05D007590 ORTHO05D007875 5.4e-11 71.2 101 45.5
Nn1g01873 Nelumbo nucifera HOM05D007590 ORTHO05D007875 7.1e-11 70.9 108 43.5
Sabra01G0067900 Salix brachista HOM05D007590 ORTHO05D007875 7.1e-11 70.9 99 46.5
Cc08_g16080 Coffea canephora HOM05D007590 ORTHO05D007875 9.3e-11 70.5 113 44.2
Nn3g19015 Nelumbo nucifera HOM05D007590 ORTHO05D007875 1.2e-10 70.1 112 47.3
FAN04G0970 Fragaria x ananassa HOM05D007590 ORTHO05D007875 1.6e-10 69.7 103 38.8
Peaxi162Scf00102g00178 Petunia axillaris HOM05D007590 ORTHO05D007875 2.7e-10 68.9 110 41.8
FAN13G0413 Fragaria x ananassa HOM05D007590 ORTHO05D007875 4.6e-10 68.2 104 40.4
Sabra03G0101100 Salix brachista HOM05D007590 ORTHO05D007875 4.6e-10 68.2 110 46.4
FAN08G0943 Fragaria x ananassa HOM05D007590 ORTHO05D007875 6.0e-10 67.8 103 39.8
TAR636G1032 Trochodendron aralioides HOM05D007590 ORTHO05D007875 1.0e-09 67.0 100 43.0
CiPaw.11G121300 Carya illinoinensis HOM05D007590 ORTHO05D007875 1.7e-09 66.2 108 45.4
Cfa012011 Carpinus fangiana HOM05D007590 ORTHO05D007875 2.3e-09 65.9 120 41.7
TAR629G2201 Trochodendron aralioides HOM05D007590 ORTHO05D007875 3.0e-09 65.5 77 54.5
QL02p030422 Quercus lobata HOM05D007590 ORTHO05D007875 3.9e-09 65.1 111 38.7
CDE10G0175 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 5.1e-09 64.7 108 39.8
PGSC0003DMG400005790 Solanum tuberosum HOM05D007590 ORTHO05D007875 5.1e-09 64.7 116 43.1
PGSC0003DMG400012280 Solanum tuberosum HOM05D007590 ORTHO05D007875 8.7e-09 63.9 108 42.6
Aqoxy5G04230 Aquilegia oxysepala HOM05D007590 ORTHO05D007875 1.9e-08 62.8 113 41.6
Thhalv10023875m.g Eutrema salsugineum HOM05D010600 ORTHO05D007875 2.5e-08 62.4 119 37.0
Phvul.002G164500 Phaseolus vulgaris HOM05D007590 ORTHO05D007875 2.5e-08 62.4 97 42.3
BcaC04g22619 Brassica carinata HOM05D010600 ORTHO05D007875 3.3e-08 62.0 117 40.2
Sopen08g004200 Solanum pennellii HOM05D007590 ORTHO05D007875 3.3e-08 62.0 116 41.4
Sopen08g030630 Solanum pennellii HOM05D007590 ORTHO05D007875 4.3e-08 61.6 108 41.7
MSTRG.25673 Avicennia marina HOM05D007590 ORTHO05D007875 5.6e-08 61.2 108 38.0
BcaB07g31500 Brassica carinata HOM05D010600 ORTHO05D007875 5.6e-08 61.2 116 39.7
Gohir.D03G083500 Gossypium hirsutum HOM05D007590 ORTHO05D007875 5.6e-08 61.2 51 68.6
Gorai.003G079100 Gossypium raimondii HOM05D007590 ORTHO05D007875 5.6e-08 61.2 51 68.6
Solyc08g082370.1 Solanum lycopersicum HOM05D007590 ORTHO05D007875 5.6e-08 61.2 108 41.7
A09p14360 Brassica napus HOM05D010600 ORTHO05D007875 7.3e-08 60.8 116 38.8
BraA09t37083Z Brassica rapa HOM05D010600 ORTHO05D007875 7.3e-08 60.8 116 38.8
CSS0045762 Camellia sinensis var. sinensis HOM05D007590 ORTHO05D007875 7.3e-08 60.8 110 42.7
CANSAT21G0370 Cannabis sativa HOM05D007590 ORTHO05D007875 7.3e-08 60.8 123 39.8
CDE10G0927 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 7.3e-08 60.8 100 43.0
Ciclev10022592m.g Citrus clementina HOM05D007590 ORTHO05D007875 7.3e-08 60.8 106 39.6
RcHm_v2.0_Chr7g0194781 Rosa chinensis HOM05D007590 ORTHO05D007875 7.3e-08 60.8 101 38.6
C09p17280 Brassica napus HOM05D010600 ORTHO05D007875 9.6e-08 60.5 116 37.9
Carub.0002s0036 Capsella rubella HOM05D010600 ORTHO05D007875 9.6e-08 60.5 121 38.8
Medtr5g009260 Medicago truncatula HOM05D007590 ORTHO05D007875 1.3e-07 60.1 101 39.6
Sp2g00320 Schrenkiella parvula HOM05D010600 ORTHO05D007875 1.3e-07 60.1 124 40.3
Sed0026863 Sechium edule HOM05D007590 ORTHO05D007875 2.1e-07 59.3 113 46.0
DCAR_006487 Daucus carota HOM05D007590 ORTHO05D007875 3.6e-07 58.5 114 37.7
BolC9t54630H Brassica oleracea HOM05D010600 ORTHO05D007875 8.1e-07 57.4 116 37.1
LjContig00312_ERROPOS870357g0000452 Lotus japonicus HOM05D007590 ORTHO05D007875 8.1e-07 57.4 115 38.3
Nitab4.5_0002782g0040 Nicotiana tabacum HOM05D007590 ORTHO05D007875 8.1e-07 57.4 111 38.7
Peaxi162Scf00074g00097 Petunia axillaris HOM05D007590 ORTHO05D007875 8.1e-07 57.4 98 41.8
Aa31LG2G1420 Aethionema arabicum HOM05D010600 ORTHO05D007875 1.1e-06 57.0 117 36.8
AL2G10440 Arabidopsis lyrata HOM05D010600 ORTHO05D007875 1.4e-06 56.6 117 39.3
TPR.G25602 Trifolium pratense HOM05D007590 ORTHO05D007875 1.8e-06 56.2 97 42.3
BcaB07g31463 Brassica carinata HOM05D010600 ORTHO05D007875 2.4e-06 55.8 118 38.1
Ca_24513_v3 Cicer arietinum L. HOM05D007590 ORTHO05D007875 3.1e-06 55.5 63 50.8
Ca_29733_v3 Cicer arietinum L. HOM05D007590 ORTHO05D007875 3.1e-06 55.5 63 50.8
AT1G64405 Arabidopsis thaliana HOM05D010600 ORTHO05D007875 5.3e-06 54.7 121 36.4
Nitab4.5_0001231g0140 Nicotiana tabacum HOM05D007590 ORTHO05D007875 5.3e-06 54.7 98 40.8
TWI60G0225 Tripterygium wilfordii HOM05D007590 ORTHO05D007875 6.9e-06 54.3 110 39.1
Lsat_1_v5_gn_6_83961 Lactuca sativa HOM05D007590 ORTHO05D007875 9.0e-06 53.9 102 40.2


User provided reference genes

Program Settings