Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 1.9e-167 592.4 302 100.0
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 1.1e-157 560.1 302 94.4
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 1.4e-154 549.7 302 91.7
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 1.3e-152 543.1 302 90.7
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 1.9e-151 539.3 302 90.4
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 1.4e-146 523.1 302 85.8
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 1.4e-146 523.1 282 94.3
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 1.6e-145 519.6 304 86.8
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 2.1e-145 519.2 302 85.4
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 2.7e-145 518.8 304 86.5
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 3.9e-144 515.0 304 86.2
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 4.8e-142 508.1 302 84.8
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 8.1e-142 507.3 303 84.8
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 1.1e-141 506.9 302 82.1
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 1.2e-140 503.4 302 84.1
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 2.0e-140 502.7 302 83.1
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 2.6e-140 502.3 302 82.1
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 1.7e-139 499.6 304 84.2
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 4.9e-139 498.0 304 82.9
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 1.4e-138 496.5 304 81.9
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 2.5e-138 495.7 304 82.9
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 2.1e-137 492.7 297 82.5
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 2.7e-137 492.3 304 82.9
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 6.0e-137 491.1 304 80.3
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 1.3e-136 490.0 304 81.2
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 3.9e-136 488.4 302 81.5
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 8.7e-136 487.3 304 79.3
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 1.5e-135 486.5 297 80.8
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 1.5e-135 486.5 297 80.8
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 1.5e-135 486.5 304 79.3
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 2.5e-135 485.7 301 80.1
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 4.3e-135 485.0 298 80.5
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 4.3e-135 485.0 298 82.2
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 7.4e-135 484.2 304 78.9
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 7.4e-135 484.2 304 78.6
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 1.3e-134 483.4 298 79.5
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 1.6e-134 483.0 304 78.9
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 2.1e-134 482.6 304 79.3
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 2.1e-134 482.6 304 79.6
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 2.1e-134 482.6 304 79.6
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 2.8e-134 482.3 298 81.9
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 3.7e-134 481.9 298 81.9
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 6.2e-134 481.1 298 81.9
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 8.2e-134 480.7 304 78.9
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 1.1e-133 480.3 304 78.3
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 4.1e-133 478.4 304 79.3
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 4.1e-133 478.4 304 78.3
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 5.3e-133 478.0 304 78.9
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 9.0e-133 477.2 298 80.9
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 1.2e-132 476.9 304 80.3
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.0e-132 476.1 302 79.1
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 1.0e-131 473.8 298 78.9
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 1.0e-131 473.8 304 78.0
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 1.3e-131 473.4 298 79.2
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 2.9e-131 472.2 298 79.5
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 5.0e-131 471.5 304 78.0
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 5.0e-131 471.5 298 78.5
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 5.5e-130 468.0 304 77.6
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 5.5e-130 468.0 298 78.9
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 1.6e-129 466.5 306 76.5
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 1.6e-129 466.5 306 76.5
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 3.5e-129 465.3 306 76.1
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 7.9e-129 464.2 306 76.1
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 7.9e-129 464.2 304 77.0
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 1.0e-128 463.8 298 77.5
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 1.3e-128 463.4 306 75.8
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 1.8e-128 463.0 306 75.5
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 2.3e-128 462.6 302 76.2
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 3.0e-128 462.2 302 77.5
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 3.0e-128 462.2 302 76.5
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 1.1e-127 460.3 298 76.5
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 1.5e-127 459.9 302 76.8
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 3.3e-127 458.8 298 76.5
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 4.3e-127 458.4 300 77.3
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 5.7e-127 458.0 304 77.0
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 9.7e-127 457.2 304 76.3
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 2.2e-126 456.1 298 76.8
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 2.8e-126 455.7 302 76.5
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 2.4e-125 452.6 298 75.2
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 4.1e-125 451.8 302 76.5
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 3.8e-123 445.3 305 75.1
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 2.3e-120 436.0 283 78.1
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 3.2e-114 415.6 293 70.3
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 6.1e-113 411.4 302 68.5
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.0e-112 410.6 262 79.4
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 1.5e-111 406.8 246 83.7
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 2.6e-111 406.0 293 70.6
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 4.4e-111 405.2 296 68.2
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 1.5e-108 396.7 299 66.9
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 3.5e-108 395.6 304 66.8
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 9.4e-106 387.5 264 72.7
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 6.7e-104 381.3 266 73.3
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 7.5e-95 351.3 242 71.1
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 2.7e-92 342.8 304 59.2
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 1.6e-89 333.6 295 62.0
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 4.7e-89 332.0 218 77.1
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 8.0e-89 331.3 263 64.6
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 1.0e-88 330.9 230 71.7
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 5.7e-87 325.1 298 56.7
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 2.2e-86 323.2 254 65.4
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 7.0e-85 318.2 288 58.0
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 4.5e-84 315.5 298 55.0
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 5.9e-84 315.1 196 79.6
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 4.7e-81 305.4 302 57.3
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 4.7e-73 278.9 194 69.1
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 1.8e-72 276.9 300 51.0
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 3.6e-65 252.7 310 44.8
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 4.9e-62 242.3 214 60.7
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 5.4e-53 212.2 303 45.9
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.1e-52 210.3 143 74.1
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.5e-52 209.5 144 74.3
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 6.0e-52 208.8 144 73.6
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 3.6e-49 199.5 313 40.3
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 8.4e-46 188.3 161 55.3
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.2e-45 186.4 144 68.8
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 2.1e-41 173.7 115 74.8
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 4.9e-38 162.5 358 31.6
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 2.4e-37 160.2 316 34.5
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 9.3e-37 158.3 91 81.3
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 1.0e-35 154.8 263 41.4
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 6.7e-27 125.6 333 30.9
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 1.3e-22 111.3 80 72.5
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 6.5e-14 82.4 43 88.4


User provided reference genes

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