Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib068G0428 Durio zibethinus HOM05D004908 ORTHO05D006418 1.9e-195 685.6 344 100.0
Thecc.03G001900 Theobroma cacao HOM05D004908 ORTHO05D006418 2.6e-136 489.2 346 76.0
Gorai.008G298500 Gossypium raimondii HOM05D004908 ORTHO05D006418 9.0e-121 437.6 345 69.9
Gohir.A12G276800 Gossypium hirsutum HOM05D004908 ORTHO05D006418 8.4e-119 431.0 345 69.3
Gohir.D12G277800 Gossypium hirsutum HOM05D004908 ORTHO05D006418 4.2e-102 375.6 345 62.9
QL10p019966 Quercus lobata HOM05D004908 ORTHO05D006418 1.7e-98 363.6 353 58.9
Cpa.g.sc94.75 Carica papaya HOM05D004908 ORTHO05D006418 3.7e-98 362.5 348 58.3
Prupe.5G207300 Prunus persica HOM05D004908 ORTHO05D006418 3.7e-98 362.5 348 58.6
Manes.14G087300 Manihot esculenta HOM05D004908 ORTHO05D006418 5.3e-97 358.6 356 59.3
MD14G1214000 Malus domestica HOM05D004908 ORTHO05D006418 2.6e-96 356.3 350 58.0
Cfa019355 Carpinus fangiana HOM05D004908 ORTHO05D006418 2.9e-95 352.8 347 59.4
CiPaw.12G009100 Carya illinoinensis HOM05D004908 ORTHO05D006418 1.1e-94 350.9 347 58.2
Potri.006G227300 Populus trichocarpa HOM05D004908 ORTHO05D006418 1.9e-94 350.1 352 58.2
Ciclev10021158m.g Citrus clementina HOM05D004908 ORTHO05D006418 3.2e-94 349.4 347 58.5
RcHm_v2.0_Chr7g0183321 Rosa chinensis HOM05D004908 ORTHO05D006418 3.2e-94 349.4 346 58.7
Dinv17436 Davidia involucrata HOM05D004908 ORTHO05D006418 7.2e-94 348.2 354 56.8
Atru.chr9.517 Acer truncatum HOM05D004908 ORTHO05D006418 4.7e-93 345.5 349 58.5
FvH4_5g13640 Fragaria vesca HOM05D004908 ORTHO05D006418 6.7e-92 341.7 351 56.7
Haze_07746 Corylus avellana HOM05D004908 ORTHO05D006418 2.6e-91 339.7 376 55.3
Sabra06G0175900 Salix brachista HOM05D004908 ORTHO05D006418 4.4e-91 339.0 347 59.1
GSVIVG01008119001 Vitis vinifera HOM05D004908 ORTHO05D006418 4.4e-91 339.0 340 56.2
Hma1.2p1_0060F.1_g032940 Hydrangea macrophylla HOM05D004908 ORTHO05D006418 2.2e-90 336.7 353 56.4
CSS0022679 Camellia sinensis var. sinensis HOM05D004908 ORTHO05D006418 8.2e-90 334.7 346 54.6
TWI81G0201 Tripterygium wilfordii HOM05D004908 ORTHO05D006418 2.0e-88 330.1 347 56.2
CANSAT80G1354 Cannabis sativa HOM05D004908 ORTHO05D006418 7.7e-88 328.2 349 54.7
CsaV3_1G006120 Cucumis sativus L. HOM05D004908 ORTHO05D006418 7.7e-88 328.2 300 59.0
Prupe.5G207200 Prunus persica HOM05D004908 ORTHO05D006418 1.5e-86 323.9 348 54.6
ClCG04G011680 Citrullus lanatus HOM05D004908 ORTHO05D006418 3.6e-85 319.3 299 57.9
Sed0013495 Sechium edule HOM05D004908 ORTHO05D006418 5.2e-84 315.5 303 57.1
TAR371G0785 Trochodendron aralioides HOM05D004908 ORTHO05D006418 6.8e-84 315.1 348 54.3
BcaB07g31879 Brassica carinata HOM05D004908 ORTHO05D006418 5.7e-83 312.0 339 53.4
BolC5t30387H Brassica oleracea HOM05D004908 ORTHO05D006418 5.7e-83 312.0 338 55.3
Carub.0001s1823 Capsella rubella HOM05D004908 ORTHO05D006418 7.5e-83 311.6 342 54.1
Cc00_g03370 Coffea canephora HOM05D004908 ORTHO05D006418 1.3e-82 310.8 350 55.7
BcaC05g25755 Brassica carinata HOM05D004908 ORTHO05D006418 2.2e-82 310.1 339 55.5
A06p14680 Brassica napus HOM05D004908 ORTHO05D006418 2.2e-82 310.1 343 54.8
C05p16860 Brassica napus HOM05D004908 ORTHO05D006418 2.2e-82 310.1 339 55.5
BraA06t24593Z Brassica rapa HOM05D004908 ORTHO05D006418 2.2e-82 310.1 343 54.8
Glyma.05G019500 Glycine max HOM05D004908 ORTHO05D006418 4.8e-82 308.9 331 54.4
Thhalv10008142m.g Eutrema salsugineum HOM05D004908 ORTHO05D006418 6.3e-82 308.5 334 52.7
Duzib205G0531 Durio zibethinus HOM05D004908 ORTHO05D006418 2.4e-81 306.6 362 49.2
AT1G18600 Arabidopsis thaliana HOM05D004908 ORTHO05D006418 4.1e-81 305.8 342 53.8
AL1G31040 Arabidopsis lyrata HOM05D004908 ORTHO05D006418 9.1e-81 304.7 342 54.1
Manes.14G087101 Manihot esculenta HOM05D004908 ORTHO05D006418 1.2e-80 304.3 349 50.4
CARHR019220 Cardamine hirsuta HOM05D004908 ORTHO05D006418 7.7e-80 301.6 340 53.2
Hund02570 Selenicereus undatus HOM05D004908 ORTHO05D006418 5.0e-79 298.9 344 53.5
Sp1g16570 Schrenkiella parvula HOM05D004908 ORTHO05D006418 6.5e-79 298.5 342 51.8
Lj9C439G11 Lonicera japonica HOM05D004908 ORTHO05D006418 1.1e-78 297.7 213 69.0
Rhsim08G0143800 Rhododendron simsii HOM05D004908 ORTHO05D006418 2.1e-77 293.5 387 45.2
Eucgr.B00624 Eucalyptus grandis HOM05D004908 ORTHO05D006418 2.7e-77 293.1 349 52.1
Oeu032097.2 Olea europaea HOM05D004908 ORTHO05D006418 3.6e-77 292.7 336 53.9
HanXRQChr05g0153521 Helianthus annuus HOM05D004908 ORTHO05D006418 6.1e-77 292.0 351 52.4
VMungo1215G2693 Vigna mungo HOM05D004908 ORTHO05D006418 8.0e-77 291.6 316 52.5
Lsat_1_v5_gn_5_22901 Lactuca sativa HOM05D004908 ORTHO05D006418 1.0e-76 291.2 351 51.0
ECA246G3883 Erigeron canadensis HOM05D004908 ORTHO05D006418 1.4e-76 290.8 235 65.1
Phvul.003G183300 Phaseolus vulgaris HOM05D004908 ORTHO05D006418 2.3e-76 290.0 316 51.3
Ah.11g047620 Amaranthus hybridus HOM05D004908 ORTHO05D006418 2.6e-75 286.6 349 51.6
Peaxi162Scf01223g00009 Petunia axillaris HOM05D004908 ORTHO05D006418 3.4e-75 286.2 223 67.3
AUR62039652 Chenopodium quinoa HOM05D004908 ORTHO05D006418 7.5e-75 285.0 341 49.9
Aqoxy3G03654 Aquilegia oxysepala HOM05D004908 ORTHO05D006418 1.3e-74 284.3 298 52.7
Nn4g23471 Nelumbo nucifera HOM05D004908 ORTHO05D006418 1.7e-74 283.9 347 50.7
THA.LOC104808039 Tarenaya hassleriana HOM05D004908 ORTHO05D006418 1.1e-73 281.2 338 51.2
MELO3C002041.2 Cucumis melo HOM05D004908 ORTHO05D006418 1.4e-73 280.8 270 56.3
Lalb_Chr07g0178341 Lupinus albus HOM05D004908 ORTHO05D006418 3.1e-73 279.6 308 52.3
Aa31LG7G3360 Aethionema arabicum HOM05D004908 ORTHO05D006418 4.1e-73 279.3 341 49.3
AUR62021531 Chenopodium quinoa HOM05D004908 ORTHO05D006418 4.1e-73 279.3 354 49.4
Medtr4g109700 Medicago truncatula HOM05D004908 ORTHO05D006418 4.1e-73 279.3 319 50.5
Migut.D01626 Erythranthe guttata HOM05D004908 ORTHO05D006418 9.2e-73 278.1 219 65.3
Sopen12g018880 Solanum pennellii HOM05D004908 ORTHO05D006418 1.6e-72 277.3 353 48.7
SGA_v2.0_scaffold51G18774 Striga asiatica HOM05D004908 ORTHO05D006418 1.6e-72 277.3 366 48.4
MSTRG.9592 Avicennia marina HOM05D004908 ORTHO05D006418 2.0e-72 276.9 337 49.0
FAN13G1921 Fragaria x ananassa HOM05D004908 ORTHO05D006418 3.8e-71 272.7 344 48.8
Lj4g0028183 Lotus japonicus HOM05D004908 ORTHO05D006418 1.9e-70 270.4 290 52.4
arahy.Tifrunner.gnm1.ann1.J6BFMQ Arachis hypogaea HOM05D004908 ORTHO05D006418 3.3e-70 269.6 334 48.2
arahy.Tifrunner.gnm1.ann1.PAN20U Arachis hypogaea HOM05D004908 ORTHO05D006418 3.3e-70 269.6 334 48.2
TPR.G1983 Trifolium pratense HOM05D004908 ORTHO05D006418 7.3e-70 268.5 223 61.9
FAN08G1663 Fragaria x ananassa HOM05D004908 ORTHO05D006418 2.8e-69 266.5 346 48.8
EL10Ac5g11159 Beta vulgaris HOM05D004908 ORTHO05D006418 1.8e-68 263.8 209 64.6
FAN18G1888 Fragaria x ananassa HOM05D004908 ORTHO05D006418 2.6e-67 260.0 344 46.8
MBI16_g10851_MAGBIO Magnolia biondii HOM05D004908 ORTHO05D006418 4.9e-66 255.8 303 50.2
PSO478G4625 Papaver somniferum HOM05D004908 ORTHO05D006418 6.4e-66 255.4 216 61.1
Nitab4.5_0001797g0080 Nicotiana tabacum HOM05D004908 ORTHO05D006418 1.1e-65 254.6 366 47.0
FAN13G3071 Fragaria x ananassa HOM05D004908 ORTHO05D006418 2.0e-64 250.4 343 45.5
FAN08G0411 Fragaria x ananassa HOM05D004908 ORTHO05D006418 2.3e-63 246.9 339 48.1
Nitab4.5_0006506g0020 Nicotiana tabacum HOM05D004908 ORTHO05D006418 3.0e-63 246.5 213 62.9
DCAR_011562 Daucus carota HOM05D004908 ORTHO05D006418 5.0e-63 245.7 238 55.5
SalBow7G1843 Salvia bowleyana HOM05D004908 ORTHO05D006418 1.9e-62 243.8 218 56.0
SHI17490 Sapria himalayana HOM05D004908 ORTHO05D006418 3.1e-60 236.5 211 60.7
unitig_699.g19027 Utricularia gibba HOM05D004908 ORTHO05D006418 2.0e-59 233.8 193 61.1
CDE07G0469 Ceratophyllum demersum HOM05D004908 ORTHO05D006418 1.3e-58 231.1 278 46.0
Os01g0763100 Oryza sativa ssp. japonica HOM05D004908 ORTHO05D006418 1.1e-57 228.0 226 52.2
HPP92_019201 Vanilla planifolia HOM05D004908 ORTHO05D006418 2.0e-56 223.8 219 52.5
Sc04g0004310 Simmondsia chinensis HOM05D004908 ORTHO05D006418 7.8e-56 221.9 334 42.8
PSO017G6704 Papaver somniferum HOM05D004908 ORTHO05D006418 4.3e-54 216.1 223 54.3
PSO017G5063 Papaver somniferum HOM05D004908 ORTHO05D006418 5.6e-54 215.7 223 53.8
ATR0827G189 Amborella trichopoda HOM05D004908 ORTHO05D006418 8.1e-53 211.8 203 54.2
vmacro17622 Vaccinium macrocarpon HOM05D004908 ORTHO05D006418 1.2e-51 208.0 209 56.0
Prupe.3G124800 Prunus persica HOM05D004908 ORTHO05D006418 8.3e-50 201.8 353 41.9
PGR083G2541 Punica granatum HOM05D004908 ORTHO05D006418 5.4e-49 199.1 272 44.5
Zm00001eb370410 Zea mays HOM05D004908 ORTHO05D006418 3.0e-47 193.4 193 52.8
PSO017G2617 Papaver somniferum HOM05D004908 ORTHO05D006418 5.1e-47 192.6 214 50.5
FAN13G1644 Fragaria x ananassa HOM05D004908 ORTHO05D006418 5.6e-46 189.1 198 54.0
SalBow7G4422 Salvia bowleyana HOM05D004908 ORTHO05D006418 5.6e-46 189.1 234 47.9
Gohir.D10G255500 Gossypium hirsutum HOM05D004908 ORTHO05D006418 2.1e-45 187.2 131 76.3
CARHR067290 Cardamine hirsuta HOM05D004908 ORTHO05D006418 2.8e-45 186.8 310 38.7
AT1G74130 Arabidopsis thaliana HOM05D004908 ORTHO05D006418 6.2e-45 185.7 263 41.1
AL2G34040 Arabidopsis lyrata HOM05D004908 ORTHO05D006418 4.0e-44 183.0 263 40.7
Carub.0002s2094 Capsella rubella HOM05D004908 ORTHO05D006418 4.4e-43 179.5 318 37.1
Pp3c22_7870 Physcomitrium patens HOM05D004908 ORTHO05D006418 4.4e-43 179.5 198 49.0
Mapoly0086s0048 Marchantia polymorpha HOM05D004908 ORTHO05D006418 5.8e-43 179.1 318 39.3
Psat0s3566g0040 Pisum sativum HOM05D004908 ORTHO05D006418 8.4e-42 175.3 241 45.6
SalBow7G0217 Salvia bowleyana HOM05D004908 ORTHO05D006418 8.4e-42 175.3 231 45.5
AagrBONN_evm.TU.Sc2ySwM_368.1628 Anthoceros agrestis HOM05D004908 ORTHO05D006418 5.4e-41 172.6 210 45.7
BraA07t31547Z Brassica rapa HOM05D003320 ORTHO05D003941 1.2e-40 171.4 251 41.0
BcaC08g46817 Brassica carinata HOM05D004908 ORTHO05D006418 1.0e-39 168.3 283 37.8
FvH4_5g13620 Fragaria vesca HOM05D004908 ORTHO05D006418 2.3e-39 167.2 158 56.3
RcHm_v2.0_Chr1g0346931 Rosa chinensis HOM05D004908 ORTHO05D006418 5.1e-39 166.0 128 69.5
Carub.0002s2095 Capsella rubella HOM05D004908 ORTHO05D006418 5.6e-38 162.5 248 39.9
A07p40020 Brassica napus HOM05D003320 ORTHO05D003941 1.1e-36 158.3 242 40.1
SalBow7G4769 Salvia bowleyana HOM05D004908 ORTHO05D006418 2.4e-36 157.1 359 36.2
Thhalv10019561m.g Eutrema salsugineum HOM05D004908 ORTHO05D006418 3.1e-36 156.8 339 36.9
Glyma.17G080300 Glycine max HOM05D004908 ORTHO05D006418 5.2e-36 156.0 198 50.5
C06p48280 Brassica napus HOM05D004908 ORTHO05D006418 5.8e-35 152.5 276 36.2
Solyc12g038600.2 Solanum lycopersicum HOM05D004908 ORTHO05D006418 1.3e-34 151.4 144 58.3
BolC6t39860H Brassica oleracea HOM05D004908 ORTHO05D006418 2.9e-34 150.2 234 38.9
Actinidia04812 Actinidia chinensis HOM05D004908 ORTHO05D006418 3.8e-34 149.8 234 45.3
C06p48290 Brassica napus HOM05D003320 ORTHO05D003941 4.2e-33 146.4 249 37.8
BcaC08g46813 Brassica carinata HOM05D004908 ORTHO05D006418 1.6e-32 144.4 232 38.8
AT1G74140 Arabidopsis thaliana HOM05D004908 ORTHO05D006418 2.1e-32 144.1 308 35.4
MCO07G692 Micromonas commoda HOM05D004908 ORTHO05D006418 2.7e-32 143.7 215 38.6
SEGI_05482 Sequoiadendron giganteum HOM05D004908 ORTHO05D006418 3.0e-31 140.2 142 54.2
BcaC08g46846 Brassica carinata HOM05D003320 ORTHO05D003941 4.3e-30 136.3 287 36.2
RcHm_v2.0_Chr6g0258631 Rosa chinensis HOM05D004908 ORTHO05D006418 6.2e-29 132.5 108 64.8
Solyc12g038590.2 Solanum lycopersicum HOM05D004908 ORTHO05D006418 6.2e-29 132.5 229 40.6
Actinidia13428 Actinidia chinensis HOM05D004908 ORTHO05D006418 4.0e-28 129.8 101 66.3
vmacro17623 Vaccinium macrocarpon HOM05D004908 ORTHO05D006418 5.3e-28 129.4 93 66.7
HPP92_019191 Vanilla planifolia HOM05D004908 ORTHO05D006418 1.3e-26 124.8 113 53.1
Gohir.A06G087200 Gossypium hirsutum HOM05D004908 ORTHO05D006418 1.4e-25 121.3 77 76.6
RcHm_v2.0_Chr7g0183341 Rosa chinensis HOM05D004908 ORTHO05D006418 1.2e-24 118.2 113 54.9
RcHm_v2.0_Chr6g0258651 Rosa chinensis HOM05D004908 ORTHO05D006418 2.3e-23 114.0 76 76.3
RcHm_v2.0_Chr1g0346941 Rosa chinensis HOM05D004908 ORTHO05D006418 2.6e-19 100.5 72 68.1
CBR_g24070 Chara braunii HOM05D000019 ORTHO05D000002 1.4e-17 94.7 132 37.9
BolC6t39863H Brassica oleracea HOM05D004908 ORTHO05D039080 6.0e-16 89.4 164 39.6
FvH4_5g13610 Fragaria vesca HOM05D004908 ORTHO05D006418 2.3e-15 87.4 73 64.4
Dinv17434 Davidia involucrata HOM05D004908 ORTHO05D006418 4.3e-14 83.2 88 56.8
BcaC08g46819 Brassica carinata HOM05D004908 ORTHO05D039080 1.7e-10 71.2 67 53.7
Gohir.A07G149500 Gossypium hirsutum HOM05D004908 ORTHO05D006418 1.2e-08 65.1 43 69.8
Gohir.D08G108308 Gossypium hirsutum HOM05D054191 ORTHO05D047555 8.7e-07 58.9 56 55.4
Gorai.004G115800 Gossypium raimondii HOM05D054191 ORTHO05D047555 8.7e-07 58.9 56 55.4
Ciclev10001765m.g Citrus clementina HOM05D007004 ORTHO05D009040 7.4e-06 55.8 199 28.6


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