Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib068G0259 Durio zibethinus HOM05D006519 ORTHO05D008306 2.8e-163 578.6 290 100.0
Gorai.012G002000 Gossypium raimondii HOM05D006519 ORTHO05D008306 2.8e-131 472.2 291 82.5
Gohir.D04G001000 Gossypium hirsutum HOM05D006519 ORTHO05D008306 6.9e-130 467.6 291 82.1
Gohir.A05G415200 Gossypium hirsutum HOM05D006519 ORTHO05D008306 9.9e-129 463.8 283 82.7
Thecc.03G004500 Theobroma cacao HOM05D006519 ORTHO05D008306 1.5e-124 449.9 286 80.4
Sabra12G0054300 Salix brachista HOM05D006519 ORTHO05D008306 2.0e-113 412.9 290 70.3
Potri.012G076100 Populus trichocarpa HOM05D006519 ORTHO05D008306 8.4e-112 407.5 290 70.3
MD06G1181000 Malus domestica HOM05D006519 ORTHO05D008306 3.2e-111 405.6 290 71.7
TAR629G1196 Trochodendron aralioides HOM05D006519 ORTHO05D008306 4.2e-111 405.2 290 71.0
Prupe.5G179000 Prunus persica HOM05D006519 ORTHO05D008306 1.2e-110 403.7 291 72.2
Actinidia34959 Actinidia chinensis HOM05D006519 ORTHO05D008306 7.9e-110 401.0 282 72.7
Haze_07439 Corylus avellana HOM05D006519 ORTHO05D008306 1.3e-109 400.2 292 70.5
CANSAT80G0931 Cannabis sativa HOM05D006519 ORTHO05D008306 1.8e-109 399.8 278 73.0
CiPaw.11G031700 Carya illinoinensis HOM05D006519 ORTHO05D008306 1.5e-108 396.7 290 69.0
GSVIVG01007824001 Vitis vinifera HOM05D006519 ORTHO05D008306 1.9e-108 396.4 290 70.3
Ciclev10021480m.g Citrus clementina HOM05D006519 ORTHO05D008306 9.6e-108 394.0 294 68.0
COL.COLO4_04635 Corchorus olitorius HOM05D006519 ORTHO05D008306 2.1e-107 392.9 255 80.0
Nn3g17016 Nelumbo nucifera HOM05D006519 ORTHO05D008306 9.0e-106 387.5 288 69.8
CSS0037543 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 1.2e-105 387.1 291 69.1
CSS0018091 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 1.5e-105 386.7 277 71.5
Sc12g0005660 Simmondsia chinensis HOM05D006519 ORTHO05D008306 1.5e-105 386.7 285 68.8
DCAR_031285 Daucus carota HOM05D006519 ORTHO05D008306 2.6e-105 386.0 290 68.3
RcHm_v2.0_Chr7g0179701 Rosa chinensis HOM05D006519 ORTHO05D008306 3.4e-105 385.6 290 68.3
TWI81G0852 Tripterygium wilfordii HOM05D006519 ORTHO05D008306 7.6e-105 384.4 290 66.6
Oeu016332.2 Olea europaea HOM05D006519 ORTHO05D008306 7.2e-103 377.9 280 68.2
Sed0010209 Sechium edule HOM05D006519 ORTHO05D008306 9.3e-103 377.5 280 68.9
PGSC0003DMG400024585 Solanum tuberosum HOM05D006519 ORTHO05D008306 9.3e-103 377.5 286 66.1
THA.LOC104809258 Tarenaya hassleriana HOM05D006519 ORTHO05D008306 9.3e-103 377.5 280 66.4
Migut.I00056 Erythranthe guttata HOM05D006519 ORTHO05D008306 1.2e-102 377.1 286 68.5
FvH4_5g16400 Fragaria vesca HOM05D006519 ORTHO05D008306 1.2e-102 377.1 278 68.3
FAN18G3891 Fragaria x ananassa HOM05D006519 ORTHO05D008306 1.2e-102 377.1 278 68.3
Nitab4.5_0003386g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 2.1e-102 376.3 278 66.9
Solyc03g113860.2 Solanum lycopersicum HOM05D006519 ORTHO05D008306 2.1e-102 376.3 286 66.1
ECA232G3316 Erigeron canadensis HOM05D006519 ORTHO05D008306 4.6e-102 375.2 290 64.8
Cc04_g13570 Coffea canephora HOM05D006519 ORTHO05D008306 1.3e-101 373.6 294 63.6
FAN13G2537 Fragaria x ananassa HOM05D006519 ORTHO05D008306 3.0e-101 372.5 278 67.6
Sopen03g032910 Solanum pennellii HOM05D006519 ORTHO05D008306 3.0e-101 372.5 286 65.7
CsaV3_1G008220 Cucumis sativus L. HOM05D006519 ORTHO05D008306 3.9e-101 372.1 277 68.6
CAN.G853.13 Capsicum annuum HOM05D006519 ORTHO05D008306 5.1e-101 371.7 286 66.1
Ah.11g046180 Amaranthus hybridus HOM05D006519 ORTHO05D008306 1.1e-100 370.5 277 64.6
Hund02710 Selenicereus undatus HOM05D006519 ORTHO05D008306 1.1e-100 370.5 277 68.6
FAN08G1114 Fragaria x ananassa HOM05D006519 ORTHO05D008306 2.5e-100 369.4 288 64.6
HanXRQChr09g0271821 Helianthus annuus HOM05D006519 ORTHO05D008306 3.3e-100 369.0 290 62.1
Lsat_1_v5_gn_4_73480 Lactuca sativa HOM05D006519 ORTHO05D008306 7.4e-100 367.9 290 62.4
MELO3C002238.2 Cucumis melo HOM05D006519 ORTHO05D008306 9.7e-100 367.5 280 67.5
AT5G50110 Arabidopsis thaliana HOM05D006519 ORTHO05D008306 3.7e-99 365.5 275 65.1
MBI14_g12785_MAGBIO Magnolia biondii HOM05D006519 ORTHO05D008306 2.4e-98 362.8 275 66.9
Lalb_Chr07g0182571 Lupinus albus HOM05D006519 ORTHO05D008306 4.1e-98 362.1 286 63.6
MSTRG.11426 Avicennia marina HOM05D006519 ORTHO05D008306 5.3e-98 361.7 266 70.7
Carub.0008s1012 Capsella rubella HOM05D006519 ORTHO05D008306 5.3e-98 361.7 275 63.3
ClCG01G014120 Citrullus lanatus HOM05D006519 ORTHO05D008306 2.0e-97 359.8 290 64.5
Psat0s1227g0160 Pisum sativum HOM05D006519 ORTHO05D008306 7.7e-97 357.8 279 65.2
TPR.G37507 Trifolium pratense HOM05D006519 ORTHO05D008306 7.7e-97 357.8 234 73.5
SalBow5G4476 Salvia bowleyana HOM05D006519 ORTHO05D008306 1.7e-96 356.7 322 58.7
SalBow5G0752 Salvia bowleyana HOM05D006519 ORTHO05D008306 2.2e-96 356.3 322 58.7
Atru.chr9.2404 Acer truncatum HOM05D006519 ORTHO05D008306 2.9e-96 355.9 283 66.8
arahy.Tifrunner.gnm1.ann1.L198ZR Arachis hypogaea HOM05D006519 ORTHO05D008306 2.9e-96 355.9 289 63.7
Lj4g0003537 Lotus japonicus HOM05D006519 ORTHO05D008306 2.9e-96 355.9 280 65.4
PGR083G2560 Punica granatum HOM05D006519 ORTHO05D008306 6.5e-96 354.8 282 66.3
arahy.Tifrunner.gnm1.ann1.IBQC5J Arachis hypogaea HOM05D006519 ORTHO05D008306 4.2e-95 352.1 288 61.8
CARHR258520 Cardamine hirsuta HOM05D006519 ORTHO05D008306 4.2e-95 352.1 275 62.9
Sp6g11980 Schrenkiella parvula HOM05D006519 ORTHO05D008306 7.2e-95 351.3 270 62.6
BcaB01g02918 Brassica carinata HOM05D006519 ORTHO05D008306 1.6e-94 350.1 279 62.0
EL10Ac5g10829 Beta vulgaris HOM05D006519 ORTHO05D008306 3.6e-94 349.0 329 55.3
BcaC01g04830 Brassica carinata HOM05D006519 ORTHO05D008306 6.1e-94 348.2 275 62.9
Medtr4g106410 Medicago truncatula HOM05D006519 ORTHO05D008306 7.9e-94 347.8 278 64.0
A03p27660 Brassica napus HOM05D006519 ORTHO05D008306 1.4e-93 347.1 275 63.6
BolC3t15659H Brassica oleracea HOM05D006519 ORTHO05D008306 1.4e-93 347.1 275 62.5
BraA03t11979Z Brassica rapa HOM05D006519 ORTHO05D008306 1.4e-93 347.1 275 63.6
Glyma.05G033800 Glycine max HOM05D006519 ORTHO05D008306 3.9e-93 345.5 279 63.4
Aa31sc174G50 Aethionema arabicum HOM05D006519 ORTHO05D008306 6.7e-93 344.7 289 58.8
C03p33370 Brassica napus HOM05D006519 ORTHO05D008306 8.8e-93 344.4 275 62.2
AUR62008282 Chenopodium quinoa HOM05D006519 ORTHO05D008306 1.1e-92 344.0 281 63.0
Ca_21889_v3 Cicer arietinum L. HOM05D006519 ORTHO05D008306 1.1e-92 344.0 272 63.6
PSO591G0501 Papaver somniferum HOM05D006519 ORTHO05D008306 1.8e-90 336.7 303 60.4
Peaxi162Scf00017g02523 Petunia axillaris HOM05D006519 ORTHO05D008306 1.6e-86 323.6 210 72.9
Thhalv10014373m.g Eutrema salsugineum HOM05D006519 ORTHO05D008306 6.7e-85 318.2 275 58.5
Rhsim12G0161700 Rhododendron simsii HOM05D006519 ORTHO05D008306 6.7e-85 318.2 288 60.4
AL8G24100 Arabidopsis lyrata HOM05D006519 ORTHO05D008306 3.7e-83 312.4 209 68.9
SGA_v2.0_scaffold467G52031 Striga asiatica HOM05D006519 ORTHO05D008306 3.7e-83 312.4 249 63.1
Eucgr.B00339 Eucalyptus grandis HOM05D006519 ORTHO05D008306 2.4e-82 309.7 209 72.7
ATR0314G030 Amborella trichopoda HOM05D006519 ORTHO05D008306 2.0e-81 306.6 249 59.0
Zm00001eb279990 Zea mays HOM05D006519 ORTHO05D008306 6.5e-80 301.6 230 62.2
Lj9C454G3 Lonicera japonica HOM05D006519 ORTHO05D008306 4.7e-78 295.4 290 56.9
Phvul.003G197000 Phaseolus vulgaris HOM05D006519 ORTHO05D008306 3.3e-76 289.3 197 71.1
unitig_62.g23572 Utricularia gibba HOM05D006519 ORTHO05D008306 7.5e-76 288.1 239 59.4
AUR62031043 Chenopodium quinoa HOM05D006519 ORTHO05D008306 3.7e-75 285.8 229 64.6
Mapoly0003s0145 Marchantia polymorpha HOM05D006519 ORTHO05D008306 1.5e-71 273.9 234 58.1
Pp3c21_11830 Physcomitrium patens HOM05D006519 ORTHO05D008306 2.3e-69 266.5 240 54.2
Manes.06G100700 Manihot esculenta HOM05D006519 ORTHO05D008306 9.8e-68 261.2 198 66.7
vmacro16588 Vaccinium macrocarpon HOM05D006519 ORTHO05D008306 7.7e-65 251.5 184 67.4
MD14G1186100 Malus domestica HOM05D006519 ORTHO05D008306 2.1e-62 243.4 228 60.1
SMO236G0037 Selaginella moellendorffii HOM05D006519 ORTHO05D008306 3.6e-62 242.7 225 53.3
Hma1.2p1_0002F.1_g002810 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 6.1e-62 241.9 223 59.2
MD14G1186900 Malus domestica HOM05D006519 ORTHO05D008306 1.1e-58 231.1 173 69.4
MD13G1183500 Malus domestica HOM05D006519 ORTHO05D008306 1.5e-55 220.7 183 65.0
Nitab4.5_0001642g0020 Nicotiana tabacum HOM05D006519 ORTHO05D008306 1.0e-53 214.5 133 77.4
VMungo1215G1861 Vigna mungo HOM05D006519 ORTHO05D008306 3.7e-51 206.1 222 53.6
Hma1.2p1_0002F.1_g002800 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 9.2e-50 201.4 182 59.9
HPP92_010835 Vanilla planifolia HOM05D006519 ORTHO05D008306 5.6e-47 192.2 160 60.6
AagrBONN_evm.TU.Sc2ySwM_228.2029 Anthoceros agrestis HOM05D006519 ORTHO05D008306 6.2e-46 188.7 181 53.6
MCO15G300 Micromonas commoda HOM05D006519 ORTHO05D008306 2.2e-43 180.3 237 45.1
Cre09.g394584 Chlamydomonas reinhardtii HOM05D006519 ORTHO05D008306 2.9e-43 179.9 305 37.0
Actinidia19081 Actinidia chinensis HOM05D006519 ORTHO05D008306 6.0e-41 172.2 146 59.6
Glyma.17G093302 Glycine max HOM05D006519 ORTHO05D008306 2.0e-36 157.1 102 72.5
Cpa.g.sc35.56 Carica papaya HOM05D006519 ORTHO05D008306 9.8e-36 154.8 100 73.0
SEGI_15669 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 1.3e-35 154.5 144 52.8
Nitab4.5_0001642g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 2.7e-33 146.7 134 56.7
arahy.Tifrunner.gnm1.ann1.KZGX7R Arachis hypogaea HOM05D006519 ORTHO05D008306 1.8e-29 134.0 104 61.5
C05p16930 Brassica napus HOM05D006519 ORTHO05D008306 5.2e-29 132.5 98 67.3
HanXRQChr11g0328331 Helianthus annuus HOM05D006519 ORTHO05D008306 7.6e-28 128.6 88 65.9
arahy.Tifrunner.gnm1.ann1.J4WABN Arachis hypogaea HOM05D006519 ORTHO05D008306 1.3e-27 127.9 97 59.8
CDE06G0478 Ceratophyllum demersum HOM05D006519 ORTHO05D008306 8.4e-27 125.2 83 67.5
Os06g0239000 Oryza sativa ssp. japonica HOM05D006519 ORTHO05D008306 1.1e-26 124.8 101 60.4
arahy.Tifrunner.gnm1.ann1.9L22J7 Arachis hypogaea HOM05D006519 ORTHO05D014446 5.6e-23 112.5 103 53.4
BcaC05g25762 Brassica carinata HOM05D006519 ORTHO05D008306 2.2e-19 100.5 79 64.6
Dinv20697 Davidia involucrata HOM05D006519 ORTHO05D008306 2.4e-18 97.1 125 48.0
PRCOL_00000545 Prasinoderma coloniale HOM05D006519 ORTHO05D008306 5.4e-18 95.9 233 30.5
arahy.Tifrunner.gnm1.ann1.MFZI3Y Arachis hypogaea HOM05D005365 ORTHO05D006910 1.0e-16 91.7 84 53.6
arahy.Tifrunner.gnm1.ann1.4TMU9W Arachis hypogaea HOM05D005365 ORTHO05D006910 5.6e-15 85.9 68 58.8
arahy.Tifrunner.gnm1.ann1.RNN7F2 Arachis hypogaea HOM05D006519 ORTHO05D008306 5.6e-15 85.9 83 54.2
CBR_g30328 Chara braunii HOM05D000019 ORTHO05D000048 3.6e-14 83.2 96 52.1
SEGI_16810 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 3.1e-13 80.1 49 75.5
arahy.Tifrunner.gnm1.ann1.PY279F Arachis hypogaea HOM05D006519 ORTHO05D008306 2.6e-12 77.0 65 60.0
Potri.015G071001 Populus trichocarpa HOM05D006519 ORTHO05D008306 1.3e-11 74.7 53 67.9


User provided reference genes

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